Clone JMFF042N14 [sequences]

previous contigF:007362 contigR:010256
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AF384037_179414612363e-61251-63413-140+22823e-15276-464391-453-3453Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA, complete cds.
gb:AF250047_178084722363e-61251-63413-140+23823e-15276-464391-453-3453Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds.
gb:AP002901_182373562355e-61251-63412-139+21832e-15276-464391-453-3453Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08.
sp|O22607|MSI4_ARATH32363e-61161-63437-193+25823e-15279-464445-506-3507WD-40 repeat protein MSI4.>pir|G84577|G84577 probable WD-40 repeat protein, MSI4 [imported] - Arabidopsis thaliana>gb:AY
gb:AC005917_153319682355e-61251-63416-143+24823e-15279-464395-456-3457Arabidopsis thaliana chromosome 2 clone F3P11 map CIC06E08, complete sequence.
gb:AF028711_176236672355e-61251-63416-143+214818e-15279-464395-456-3457Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA, complete cds.
gb:AY100481_157694442354e-61251-63413-140+217802e-14276-464391-453-3453Zea mays nucleosome/chromatin assembly factor group C (nfc101) mRNA, complete cds.
gb:AX076396_146065052354e-61251-63413-140+218802e-14276-464391-453-3453Sequence 3 from Patent WO0104285.
gb:AJ631221_1812780102311e-59251-6348-135+26824e-15282-464394-454-3458Silene diclinis partial mRNA for putative WD repeat protein.
gb:AJ631218_1812777112311e-59251-6348-135+29816e-15282-464394-454-3458Silene dioica partial mRNA for putative WD repeat protein.>gb:AJ631219_1812778 Silene dioica partial mRNA for putative W
gb:SLA310656_1715246122311e-59251-63417-144+212816e-15282-464403-463-3473Silene latifolia partial wdr1x gene for putative WD-repeat protein exons 1-15.
gb:SLA18519_1715241132311e-59251-63416-143+213816e-15282-464402-462-3472Silene latifolia mRNA for X1 protein.
gb:SLA18517_1715239142311e-59251-63416-143+219794e-14282-464402-462-3472Silene latifolia mRNA for Y1 protein.
gb:AJ631222_1812781152285e-59251-6348-135+28816e-15282-464394-454-3458Silene noctiflora partial mRNA for putative WD repeat protein.
pir|T09936|T09936171848e-46251-63456-182+221753e-13276-464434-496-3496hypothetical protein T16L4.240 - Arabidopsis thaliana>gb:ATCHRIV71_1546894 Arabidopsis thaliana DNA chromosome 4, contig
gb:BT010610_1640556181793e-44251-63456-173+220753e-13276-464425-487-3487Arabidopsis thaliana At4g29730 gene, complete cds.>gb:AK176425_1818413 Arabidopsis thaliana mRNA for WD-40 repeat-like p
gb:SLA18518_1715240191694e-41338-6341-99+216818e-15282-464358-418-3428Silene latifolia Y1 gene.
gb:SLA310655_1715245201649e-40338-6341-100+215818e-15282-464359-419-3429Silene latifolia partial wdr1y gene for putative WD-repeat protein exons 2-15.
gb:AF250048_178084892332e-60251-63413-140+2182Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds.
gb:AF250049_1780849162001e-50251-6341-128+2168Zea mays WD-repeat protein RBAP3 (rbap3) mRNA, partial cds.
sp|O22467|MSI1_ARATH25772e-13251-63419-154+229325.2321-461379-418-3424WD-40 repeat protein MSI1.>gb:CQ887959_1454884 Sequence 37 from Patent WO2004085644.>gb:AB019228_1514097 Arabidopsis tha
gb:AY082378_156917828757e-13521-6341-38+230316.8426-464297-309-3321Silene conica SlX1-like protein mRNA, partial cds.
gb:AY088045_157306955703e-11251-63416-145+222360.21330-461368-404-3415Arabidopsis thaliana clone 40637 mRNA, complete sequence.
sp|O22468|MSI2_ARATH56703e-11251-63416-145+223360.21330-461368-404-3415WD-40 repeat protein MSI2.>pir|B84544|B84544 probable WD-40 repeat protein, MSI2 [imported] - Arabidopsis thaliana>gb:AC
gb:AF279275_248401863673e-10251-63418-151+227324.0315-461377-420-3424Gallus gallus Rbap46 polypeptide mRNA, complete cds.
pir|JC7558|JC755864673e-10251-63418-151+228324.0315-461377-420-3424chromatin assembly factor-1 p48 subunit homolog, p46 - chicken
gb:AF016848_176151665657e-10251-63417-146+224331.4333-461369-404-3424Arabidopsis thaliana WD-40 repeat protein (MSI3) mRNA, complete cds.
sp|O22469|MSI3_ARATH66657e-10251-63417-146+226331.4333-461369-404-3424WD-40 repeat protein MSI3.>pir|T05775|T05775 G1/S transition control protein-binding protein MSI3 - Arabidopsis thaliana
gb:BT002870_163646167635e-09251-63417-146+225331.4333-461369-404-3424Arabidopsis thaliana clone RAFL14-87-D13 (R20340) putative WD-40 repeat protein (MSI3) (At4g35050) mRNA, complete cds.
gb:AF519100_18077957824e-15282-46416-76-386Silene vulgaris isolate VLG22 Sv1 protein gene, partial cds.>gb:AF519101_1807796 Silene vulgaris isolate VLG15 Sv1 prote
gb:AF519045_180779310816e-15282-46416-76-386Silene latifolia isolate LAT36 SlX1 protein gene, partial cds.
gb:AF519038_180778611816e-15282-46416-76-386Silene latifolia isolate LAT20 SlX1 protein gene, partial cds.>gb:AF519039_1807787 Silene latifolia isolate LAT21 SlX1 p
sp|O22466|MSI1_LYCES21803e-14251-63419-154+2424WD-40 repeat protein MSI1.>pir|T04324|T04324 G1/S transition control protein-binding protein MSI1 - tomato>gb:AF016845_1
gb:AF374376_118815522798e-14251-63424-156+2426Oikopleura dioica clone BAC clone 001, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
gb:AF440219_180005023772e-13251-63425-160+2431Zea mays cultivar B73 MSI type nucleosome/chromatin assembly factor C (nfc103) mRNA, complete cds.
gb:AE017347_175792024772e-13251-63427-166+2435Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence.
gb:CR380948_164935326764e-13251-63432-162+2419Candida glabrata strain CBS138 chromosome B complete sequence.
gb:AX076394_146064927765e-13251-63425-160+2431Sequence 1 from Patent WO0104285.
gb:BC088588_256571829742e-12251-63419-153+2425Xenopus tropicalis hypothetical LOC496866, mRNA (cDNA clone MGC:97809 IMAGE:6991409), complete cds.
gb:BC042283_254810330742e-12251-63418-152+2425Xenopus laevis retinoblastoma binding protein 7, mRNA (cDNA clone MGC:53418 IMAGE:5571746), complete cds.
gb:HSIEF9306_201437131742e-12251-63419-153+2410H.sapiens IEF 9306 mRNA.
gb:CQ887961_145488532742e-12251-63419-153+2425Sequence 39 from Patent WO2004085644.>gb:AF097750_2473289 Gallus gallus chromatin assembly factor 1 p48 subunit mRNA, co
sp|Q60972|RBB4_MOUSE33742e-12251-63419-153+2461Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
sp|Q09028|RBB4_HUMAN34742e-12251-63419-153+2425Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
gb:BC080146_256157735742e-12251-63418-152+2297Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:89776 IMAGE:7027693), complete cds.
gb:BC067546_255472436742e-12251-63418-153+2448Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:85617 IMAGE:6524543), complete cds.
gb:BC064219_255377237742e-12251-63418-152+2425Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:76124 IMAGE:5309101), complete cds.
gb:BC072311_255656238743e-12251-63419-153+2425Xenopus laevis hypothetical protein MGC82618, mRNA (cDNA clone MGC:82618 IMAGE:5047944), complete cds.
gb:BC063984_255368439734e-12251-63419-153+2424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:77854 IMAGE:7002322), complete cds.
gb:BC045315_254915940734e-12251-63419-153+2424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:55349 IMAGE:2601332), complete cds.
gb:AY394940_253168341734e-12251-63419-153+2424Danio rerio clone RK046A1D12 retinoblastoma binding protein 4 mRNA, complete cds.
gb:CQ887965_145488742734e-12251-63468-202+2222Sequence 43 from Patent WO2004085644.
gb:BC052110_255045943735e-12251-63418-153+2426Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:56477 IMAGE:5776911), complete cds.
gb:CR857269_118151344726e-12251-63419-153+2463Pongo pygmaeus mRNA; cDNA DKFZp469A0122 (from clone DKFZp469A0122).
gb:AF297468_125995545711e-11251-63419-152+2308Schistosoma mansoni strain NMRI chromatin assembly factor 1 small subunit-like protein (RBAP48) mRNA, complete cds.
sp|Q24572|CAF1_DROME46711e-11251-63423-157+2430Chromatin assembly factor 1 P55 subunit (CAF-1 P55 subunit) (dCAF-1) (Nucleosome remodeling factor 55 kDa subunit) (NURF
gb:AF073787_247172147712e-11251-63419-153+2425Xenopus laevis retinoblastoma A associated protein mRNA, complete cds.
gb:AL929302_193324948702e-11251-63462-196+2469Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AL929302_193324849702e-11251-63413-147+2420Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AK078349_117228250702e-11251-63418-152+2425Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530404A07 product:hypothetical
sp|Q60973|RBB7_MOUSE51702e-11251-63418-152+2425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein p46) (Retinoblastoma-binding protein 7) (RBBP
sp|Q16576|RBB7_HUMAN52702e-11251-63418-152+2425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein P46) (Retinoblastoma-binding protein 7) (RBBP
gb:BC077257_255997353703e-11251-63419-153+2425Xenopus laevis retinoblastoma A associated protein, mRNA (cDNA clone MGC:79922 IMAGE:4968802), complete cds.
gb:AP006149_186095954703e-11203-6311-143+2410Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11.
pir|T23391|T2339157704e-11251-63416-149+2417hypothetical protein K07A1.12 - Caenorhabditis elegans>gb:AF116530_1242527 Caenorhabditis elegans synthetic multivulva p
gb:CR860642_118470158697e-11251-63418-152+2426Pongo pygmaeus mRNA; cDNA DKFZp459K2224 (from clone DKFZp459K2224).
pir|T38386|T3838659697e-11251-63422-160+2408hypothetical wd-40 repeat protein - fission yeast (Schizosaccharomyces pombe)>gb:SPAC25H1_1717435 S.pombe chromosome I c
gb:CR382124_165637160699e-11251-63415-151+2408Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:CNS07EGE_137366261681e-10251-63413-137+2384chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
gb:AY093418_157534862672e-10251-6312-124+2382Zea mays nucleosome/chromatin assembly factor 104 (nfc104) mRNA, complete cds.
sp|P90917|RBA1_CAEEL68602e-08266-63417-148+2412Trp-Asp repeats containing protein RBA-1.>pir|T23385|T23385 hypothetical protein K07A1.11 - Caenorhabditis elegans>gb:CE
pir|T41054|T4105469597e-08251-63428-160+2430probable chromosome assembly factor, beta transducin - fission yeast (Schizosaccharomyces pombe)>gb:SPCC1672_1720982 S.p
sp|P39984|HAT2_YEAST70597e-08251-63112-146+2401Histone acetyltransferase type B subunit 2 (EC 2.3.1.48).>pir|S50533|S50533 hypothetical protein YEL056w - yeast (Saccha
gb:CR382125_165827771573e-07251-63422-159+2417Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis.
sp|P90916|RBA2_CAEEL72551e-06308-6343-117+2385Trp-Asp repeats containing protein RBA-2.
gb:AY084042_156929973551e-06554-6341-27+2286Silene flos-jovis XY1 protein gene, partial cds.
gb:AY084036_156929374551e-06554-6341-27+2286Silene latifolia X1 protein gene, partial cds.>gb:AY084037_1569294 Silene latifolia Y1 protein gene, partial cds.>gb:AY0
sp|P13712|MSI1_YEAST75542e-06251-63421-158+2422Chromatin assembly factor 1 P50 subunit (CAF-1 P50 subunit) (MSI1 protein) (IRA1 multicopy suppressor).>pir|S07865|BVBYM
gb:AE016816_174670876543e-06251-63446-169+2423Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:AY084040_156929777526e-06554-6341-27+2286Silene vulgaris XY1 protein gene, partial cds.
gb:PFMAL1P2_139436278526e-06254-63446-182+2446Plasmodium falciparum DNA from MAL1P2.
gb:AE016818_174789979528e-06251-63423-160+2417Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence.
gb:AC147427_174470380503e-05251-50223-106+2615Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence.
gb:CR380959_165387881503e-05254-63424-160+2419Candida glabrata strain CBS138 chromosome M complete sequence.
gb:CR382138_167103482495e-05257-63446-204+2472Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:CR382128_166090083481e-04251-63429-163+2409Yarrowia lipolytica chromosome B of strain CLIB99 of Yarrowia lipolytica.
gb:CR382138_167184284472e-04251-63423-149+2415Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:CR382139_167274885466e-04251-59529-153+2460Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:BC015123_197496286440.002383-6345-93+2365Homo sapiens, Similar to retinoblastoma-binding protein 4, clone IMAGE:3686783, mRNA, partial cds.
gb:AL929302_193325287420.007536-63440-72+2285Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
pir|A84578|A8457888420.007470-634135-188+2469probable WD-40 repeat protein [imported] - Arabidopsis thaliana>gb:AC005917_1533198 Arabidopsis thaliana chromosome 2 cl
gb:PFMAL13_119134289420.009251-63439-179+2582Plasmodium falciparum 3D7 chromosome 13, *** SEQUENCING IN PROGRESS ***, 33 ordered pieces.
gb:AF470350_180288190400.025500-634169-212+2489Tortula ruralis WD40 mRNA, complete cds.
gb:AX973062_148837191400.033251-35519-53+255Sequence 3865 from Patent EP1104808.
sp|O14021|PRW1_SCHPO92390.056251-63428-159+2431RbAp48-related WD40-repeat protein prw1.>pir|T38471|T38471 probable chromatin assembly factor - fission yeast (Schizosa
gb:AC132492_174122093390.096383-63185-166+2268Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence.>gb:AC135418_1742219 Oryza sativa
gb:BC086398_210958594360.6284-24242-105+3346Rattus norvegicus CSX-associated LIM, mRNA (cDNA clone MGC:105665 IMAGE:7303205), complete cds.
gb:BX571965_79186895351.454-197583-629-1740Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence.
gb:MMGT10_211510896333.184-24242-105+3194M.musculus En-2/lacZ junction mRNA (Gt10).
gb:BC004777_208978297333.184-24242-105+3375Mus musculus RIKEN cDNA 2410043F08 gene, mRNA (cDNA clone MGC:7174 IMAGE:3257486), complete cds.
gb:AF513359_206728098333.184-24242-105+3375Mus musculus CSX-associated LIM (Cal) mRNA, complete cds.
pir|A38203|A3820399333.184-24242-105+3194proline-rich protein - mouse (fragment)
gb:AY167751_1586307100334.0494-6349-55+2124Capsella rubella putative WD-40 repeat protein (MSI2) gene, partial cds, alternatively spliced.>gb:AY167752_1586308 Caps
gb:CP000010_865185101326.954-197583-629-1740Burkholderia mallei ATCC 23344 chromosome 1, complete sequence.
gb:AE016816_1746549102329.087-1941875-1910+31963Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:AY167751_1586306103329.0437-6348-65+2134Capsella rubella putative WD-40 repeat protein (MSI2) gene, partial cds, alternatively spliced.>gb:AY167753_1586309 Caps
gb:AY070416_156681431316.8350-46646-84+2295Arabidopsis thaliana putative membrane associated protein (At4g21450) mRNA, complete cds.>gb:AY087306_1572339 Arabidopsi
gb:AE013179_28993032316.828-14479-117-2284Thermoanaerobacter tengcongensis MB4, section 206 of 244 of the complete genome.>gb:AE008691_1111995 Thermoanaerobacter
pir|T05153|T0515333316.8350-46646-84+2293hypothetical protein F18E5.70 - Arabidopsis thaliana>gb:ATCHRIV55_1545982 Arabidopsis thaliana DNA chromosome 4, contig
gb:CEAC3_135958934318.9390-464171-195+3351Caenorhabditis elegans cosmid AC3, complete sequence.
pir|T18593|T1859335318.9390-464420-444+3600hypothetical protein AC3.4 - Caenorhabditis elegans