Clone JMFF042N08 [sequences]

previous contigF:007362 contigR:010256
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AF384037_179414612192e-56265-63313-135+121393e-32280-582353-453-1453Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA, complete cds.
gb:AF250047_178084722192e-56265-63313-135+131393e-32280-582353-453-1453Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds.
gb:AP002901_182373562194e-56265-63312-134+111393e-32280-582353-453-1453Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08.
gb:AY100481_157694432192e-56265-63313-135+141362e-31280-582353-453-1453Zea mays nucleosome/chromatin assembly factor group C (nfc101) mRNA, complete cds.
gb:AX076396_146065042192e-56265-63313-135+151362e-31280-582353-453-1453Sequence 3 from Patent WO0104285.
sp|O22607|MSI4_ARATH52192e-56175-63337-188+171341e-30283-582405-506-1507WD-40 repeat protein MSI4.>pir|G84577|G84577 probable WD-40 repeat protein, MSI4 [imported] - Arabidopsis thaliana>gb:AY
gb:AC005917_153319682194e-56265-63316-138+161341e-30283-582355-456-1457Arabidopsis thaliana chromosome 2 clone F3P11 map CIC06E08, complete sequence.
gb:AF028711_176236672194e-56265-63316-138+181332e-30283-582355-456-1457Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA, complete cds.
gb:AJ631221_1812780102162e-55265-6338-130+191293e-29286-579351-454-1458Silene diclinis partial mRNA for putative WD repeat protein.
gb:AJ631218_1812777112162e-55265-6338-130+1111293e-29286-579351-454-1458Silene dioica partial mRNA for putative WD repeat protein.>gb:AJ631219_1812778 Silene dioica partial mRNA for putative W
gb:SLA310656_1715246122162e-55265-63317-139+1121293e-29286-579360-463-1473Silene latifolia partial wdr1x gene for putative WD-repeat protein exons 1-15.
gb:SLA18519_1715241132162e-55265-63316-138+1131293e-29286-579359-462-1472Silene latifolia mRNA for X1 protein.
gb:AJ631222_1812781152141e-54265-6338-130+1101293e-29286-579351-454-1458Silene noctiflora partial mRNA for putative WD repeat protein.
gb:SLA18517_1715239142162e-55265-63316-138+1161262e-28286-579359-462-1472Silene latifolia mRNA for Y1 protein.
pir|T09936|T09936171711e-41265-63356-177+1181262e-28280-582394-496-1496hypothetical protein T16L4.240 - Arabidopsis thaliana>gb:ATCHRIV71_1546894 Arabidopsis thaliana DNA chromosome 4, contig
gb:BT010610_1640556181664e-40265-63356-168+1171262e-28280-582385-487-1487Arabidopsis thaliana At4g29730 gene, complete cds.>gb:AK176425_1818413 Arabidopsis thaliana mRNA for WD-40 repeat-like p
gb:SLA18518_1715240191557e-37352-6331-94+1151294e-29286-579315-418-1428Silene latifolia Y1 gene.
gb:SLA310655_1715245201502e-35352-6331-95+1141294e-29286-579316-419-1429Silene latifolia partial wdr1y gene for putative WD-repeat protein exons 2-15.
gb:AF250048_178084892189e-56265-63313-135+1182Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds.
gb:AF250049_1780849161841e-45265-6331-123+1168Zea mays WD-repeat protein RBAP3 (rbap3) mRNA, partial cds.
gb:AY082378_156917846611e-08535-6331-33+122781e-13430-579254-309-1321Silene conica SlX1-like protein mRNA, partial cds.
gb:AY088045_157306951603e-08265-63316-140+123703e-11334-582323-404-1415Arabidopsis thaliana clone 40637 mRNA, complete sequence.
sp|O22468|MSI2_ARATH52603e-08265-63316-140+124703e-11334-582323-404-1415WD-40 repeat protein MSI2.>pir|B84544|B84544 probable WD-40 repeat protein, MSI2 [imported] - Arabidopsis thaliana>gb:AC
gb:BC042283_254810331626e-09265-63318-147+131642e-09340-573338-412-1425Xenopus laevis retinoblastoma binding protein 7, mRNA (cDNA clone MGC:53418 IMAGE:5571746), complete cds.
gb:BC064219_255377240628e-09265-63318-147+130642e-09340-573338-412-1425Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:76124 IMAGE:5309101), complete cds.
gb:BC052110_255045930626e-09265-63318-148+139633e-09340-573339-413-1426Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:56477 IMAGE:5776911), complete cds.
gb:BC067546_255472439628e-09265-63318-148+138633e-09340-573339-413-1448Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:85617 IMAGE:6524543), complete cds.
gb:BC088588_256571829626e-09265-63319-148+141627e-09340-573339-413-1425Xenopus tropicalis hypothetical LOC496866, mRNA (cDNA clone MGC:97809 IMAGE:6991409), complete cds.
gb:BC072311_255656238628e-09265-62719-146+143627e-09340-573339-413-1425Xenopus laevis hypothetical protein MGC82618, mRNA (cDNA clone MGC:82618 IMAGE:5047944), complete cds.
sp|Q60972|RBB4_MOUSE35626e-09265-63319-148+148627e-09340-573339-413-1461Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
sp|O22467|MSI1_ARATH25672e-10265-63319-149+159572e-07325-567341-418-1424WD-40 repeat protein MSI1.>gb:CQ887959_1454884 Sequence 37 from Patent WO2004085644.>gb:AB019228_1514097 Arabidopsis tha
sp|Q09028|RBB4_HUMAN36626e-09265-63319-148+149627e-09340-573339-413-1425Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit)
sp|O22466|MSI1_LYCES21703e-11265-63319-149+164541e-06337-567341-414-1424WD-40 repeat protein MSI1.>pir|T04324|T04324 G1/S transition control protein-binding protein MSI1 - tomato>gb:AF016845_1
gb:BC063984_255368442611e-08265-63319-148+144627e-09340-573339-413-1424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:77854 IMAGE:7002322), complete cds.
gb:AL929302_193324956599e-08265-63362-191+132642e-09340-573382-456-1469Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AY394940_253168344611e-08265-63319-148+145627e-09340-573339-413-1424Danio rerio clone RK046A1D12 retinoblastoma binding protein 4 mRNA, complete cds.
gb:AL929302_193324857599e-08265-63313-142+133642e-09340-573333-407-1420Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:AK078349_117228258599e-08265-63318-147+135642e-09340-573338-412-1425Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530404A07 product:hypothetical
sp|Q60973|RBB7_MOUSE59599e-08265-63318-147+136642e-09340-573338-412-1425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein p46) (Retinoblastoma-binding protein 7) (RBBP
sp|Q16576|RBB7_HUMAN60599e-08265-63318-147+137642e-09340-573338-412-1425Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein P46) (Retinoblastoma-binding protein 7) (RBBP
gb:CR860642_118470162581e-07265-62718-145+134642e-09340-573339-413-1426Pongo pygmaeus mRNA; cDNA DKFZp459K2224 (from clone DKFZp459K2224).
gb:AF016848_176151663558e-07265-63317-141+125665e-10337-582324-404-1424Arabidopsis thaliana WD-40 repeat protein (MSI3) mRNA, complete cds.
gb:CQ887961_145488533626e-09265-63319-148+155597e-08340-573339-413-1425Sequence 39 from Patent WO2004085644.>gb:AF097750_2473289 Gallus gallus chromatin assembly factor 1 p48 subunit mRNA, co
gb:AF374376_118815526673e-10265-63324-151+163541e-06337-573342-417-1426Oikopleura dioica clone BAC clone 001, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
sp|O22469|MSI3_ARATH64558e-07265-63317-141+127665e-10337-582324-404-1424WD-40 repeat protein MSI3.>pir|T05775|T05775 G1/S transition control protein-binding protein MSI3 - Arabidopsis thaliana
gb:BC045315_254915943611e-08265-63319-148+154603e-08340-573339-413-1424Danio rerio retinoblastoma binding protein 4, mRNA (cDNA clone MGC:55349 IMAGE:2601332), complete cds.
gb:AF073787_247172155597e-08265-63319-148+146627e-09340-573339-413-1425Xenopus laevis retinoblastoma A associated protein mRNA, complete cds.
pir|T23391|T2339153604e-08265-61516-138+150611e-08337-573331-406-1417hypothetical protein K07A1.12 - Caenorhabditis elegans>gb:AF116530_1242527 Caenorhabditis elegans synthetic multivulva p
gb:AF440219_180005022672e-10265-63325-155+167533e-06337-567347-420-1431Zea mays cultivar B73 MSI type nucleosome/chromatin assembly factor C (nfc103) mRNA, complete cds.
gb:AF279275_248401865551e-06265-63318-146+128658e-10319-573337-420-1424Gallus gallus Rbap46 polypeptide mRNA, complete cds.
pir|JC7558|JC755866551e-06265-63318-146+129658e-10319-573337-420-1424chromatin assembly factor-1 p48 subunit homolog, p46 - chicken
gb:BC077257_255997361581e-07265-63319-148+142627e-09340-573339-413-1425Xenopus laevis retinoblastoma A associated protein, mRNA (cDNA clone MGC:79922 IMAGE:4968802), complete cds.
gb:HSIEF9306_201437132626e-09265-63319-148+156572e-07367-573339-404-1410H.sapiens IEF 9306 mRNA.
gb:AE017347_175792023672e-10265-63327-161+168527e-06325-573352-431-1435Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence.
gb:BT002870_163646168535e-06265-63317-141+126665e-10337-582324-404-1424Arabidopsis thaliana clone RAFL14-87-D13 (R20340) putative WD-40 repeat protein (MSI3) (At4g35050) mRNA, complete cds.
sp|Q24572|CAF1_DROME54595e-08265-63323-152+152602e-08340-573343-417-1430Chromatin assembly factor 1 P55 subunit (CAF-1 P55 subunit) (dCAF-1) (Nucleosome remodeling factor 55 kDa subunit) (NURF
gb:AX076394_146064927666e-10265-62725-153+169511e-05337-567347-420-1431Sequence 1 from Patent WO0104285.
gb:CR857269_118151350602e-08265-63319-148+158572e-07367-573339-404-1463Pongo pygmaeus mRNA; cDNA DKFZp469A0122 (from clone DKFZp469A0122).
gb:AY093418_157534849602e-08265-6212-116+160564e-07352-582300-373-1382Zea mays nucleosome/chromatin assembly factor 104 (nfc104) mRNA, complete cds.
gb:AP006149_186095928634e-09217-6211-135+171494e-05352-582320-393-1410Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11.
gb:AF519100_1807795191102e-23286-5102-76-186Silene vulgaris isolate VLG22 Sv1 protein gene, partial cds.>gb:AF519101_1807796 Silene vulgaris isolate VLG15 Sv1 prote
gb:AF519038_1807786201071e-22286-5073-76-186Silene latifolia isolate LAT20 SlX1 protein gene, partial cds.>gb:AF519039_1807787 Silene latifolia isolate LAT21 SlX1 p
sp|P90916|RBA2_CAEEL76450.001322-6153-106+151611e-08337-573299-374-1385Trp-Asp repeats containing protein RBA-2.
gb:AF519045_1807793211049e-22286-5073-76-186Silene latifolia isolate LAT36 SlX1 protein gene, partial cds.
gb:AC147427_174470371503e-05265-51623-106+165542e-06337-567532-605-1615Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence.
sp|P90917|RBA1_CAEEL70521e-05280-63317-143+170503e-05340-582327-406-1412Trp-Asp repeats containing protein RBA-1.>pir|T23385|T23385 hypothetical protein K07A1.11 - Caenorhabditis elegans>gb:CE
gb:CNS07EGE_137366234626e-09265-63313-132+182390.060367-573315-380-1384chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora).
gb:CR382124_165637145611e-08265-61515-140+180400.035340-582320-397-1408Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis.
pir|T41054|T4105469521e-05265-61528-149+174464e-04430-582344-398-1430probable chromosome assembly factor, beta transducin - fission yeast (Schizosaccharomyces pombe)>gb:SPCC1672_1720982 S.p
sp|P39984|HAT2_YEAST67543e-06265-61512-136+176430.003370-582314-381-1401Histone acetyltransferase type B subunit 2 (EC 2.3.1.48).>pir|S50533|S50533 hypothetical protein YEL056w - yeast (Saccha
gb:AY084040_156929786380.12568-6331-22+157572e-07466-579243-286-1286Silene vulgaris XY1 protein gene, partial cds.
gb:BC015123_197496294326.8397-6335-88+147627e-09340-573279-353-1365Homo sapiens, Similar to retinoblastoma-binding protein 4, clone IMAGE:3686783, mRNA, partial cds.
gb:AY084042_156929983400.025568-6331-22+161541e-06466-579243-286-1286Silene flos-jovis XY1 protein gene, partial cds.
gb:AY084036_156929384400.025568-6331-22+162541e-06466-579243-286-1286Silene latifolia X1 protein gene, partial cds.>gb:AY084037_1569294 Silene latifolia Y1 protein gene, partial cds.>gb:AY0
gb:AE016816_174670872495e-05265-61546-158+179410.016430-582336-390-1423Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:CR382138_167184280410.019265-61523-138+173464e-04430-579329-382-1415Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:PFMAL1P2_139436274473e-04268-61546-171+184370.30451-564363-404-1446Plasmodium falciparum DNA from MAL1P2.
gb:CR382125_165827773473e-04265-61522-148+185351.1430-576348-395-1417Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:CR382128_166090082400.025265-61529-152+178420.009451-579348-386-1409Yarrowia lipolytica chromosome B of strain CLIB99 of Yarrowia lipolytica.
gb:AE016818_174789977440.002265-60923-147+183370.23436-573355-393-1417Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence.
sp|P13712|MSI1_YEAST75473e-04265-61221-146+192334.3436-576362-398-1422Chromatin assembly factor 1 P50 subunit (CAF-1 P50 subunit) (MSI1 protein) (IRA1 multicopy suppressor).>pir|S07865|BVBYM
gb:CR380959_165387879430.005268-61224-148+186341.5370-576358-409-1419Candida glabrata strain CBS138 chromosome M complete sequence.
sp|O14021|PRW1_SCHPO87380.16265-42328-82+181390.046322-582344-430-1431RbAp48-related WD40-repeat protein prw1.>pir|T38471|T38471 probable chromatin assembly factor - fission yeast (Schizosa
gb:CR382138_167103481400.025271-61546-193+191334.3436-582403-445-1472Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii.
gb:CR380948_164935324672e-10265-61532-151+1419Candida glabrata strain CBS138 chromosome B complete sequence.
gb:AY260751_252254140634e-09340-57316-90-1104Oreochromis mossambicus chromatin assembly factor 1 subunit mRNA, partial cds.
gb:BC080146_256157737628e-09265-63318-147+1297Xenopus tropicalis hypothetical protein MGC76124, mRNA (cDNA clone MGC:89776 IMAGE:7027693), complete cds.
pir|T38386|T3838641621e-08265-61522-149+1408hypothetical wd-40 repeat protein - fission yeast (Schizosaccharomyces pombe)>gb:SPAC25H1_1717435 S.pombe chromosome I c
gb:CQ887965_145488747611e-08265-63368-197+1222Sequence 43 from Patent WO2004085644.
gb:AF297468_125995548612e-08265-62719-145+1308Schistosoma mansoni strain NMRI chromatin assembly factor 1 small subunit-like protein (RBAP48) mRNA, complete cds.
gb:AL929302_193325053603e-08340-5641-72-185Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open
gb:CQ887967_145488866542e-06430-57379-130-1138Sequence 45 from Patent WO2004085644.
gb:CR382130_166340572472e-04343-573368-441-1452Yarrowia lipolytica chromosome D of strain CLIB99 of Yarrowia lipolytica.
gb:CQ887969_145488975458e-04430-56773-122-1130Sequence 47 from Patent WO2004085644.
gb:CR382127_165964077430.004325-576313-393-1397Yarrowia lipolytica chromosome A of strain CLIB99 of Yarrowia lipolytica.
gb:CR382139_167274878430.004265-60929-153+1460Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii.
gb:AX973062_148837185400.033265-36919-53+155Sequence 3865 from Patent EP1104808.
gb:BC086398_210958588360.6298-25642-105+2346Rattus norvegicus CSX-associated LIM, mRNA (cDNA clone MGC:105665 IMAGE:7303205), complete cds.
gb:BX571965_79186889351.468-211583-629-1740Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence.
gb:MMU38806_212113887334.3432-560344-387+3735Mus musculus fertilin beta mRNA, complete cds.
gb:MMU22057_211903988334.3432-560327-370+3718Mus musculus fertilin beta precursor (ADAM 2) mRNA, partial cds.
gb:MMU16242_211855989334.3432-560344-387+3735Mus musculus PH-30 fertilin beta subunit mRNA, complete cds.
gb:BC067046_210593190334.3315-575819-907+31572Mus musculus discs, large homolog 5 (Drosophila), mRNA (cDNA clone IMAGE:30537078), partial cds.
gb:MMGT10_211510890333.198-25642-105+2194M.musculus En-2/lacZ junction mRNA (Gt10).
gb:BC004777_208978291333.198-25642-105+2375Mus musculus RIKEN cDNA 2410043F08 gene, mRNA (cDNA clone MGC:7174 IMAGE:3257486), complete cds.
gb:AF513359_206728092333.198-25642-105+2375Mus musculus CSX-associated LIM (Cal) mRNA, complete cds.
sp|Q60718|AD02_MOUSE93334.3432-560344-387+3735ADAM 2 precursor (A disintegrin and metalloproteinase domain 2) (Fertilin beta subunit) (PH-30) (PH30) (PH30-beta).>gb:A
pir|A38203|A3820393333.198-25642-105+2194proline-rich protein - mouse (fragment)
gb:AY051454_129004894325.6315-581237-324+3397Drosophila melanogaster GH12043 full length cDNA.>gb:BT001258_1356031 Drosophila melanogaster AT02070 full insert cDNA.
gb:AF470350_180288195326.8514-627169-205+1489Tortula ruralis WD40 mRNA, complete cds.
gb:AE014297_113910695325.6348-572200-266+3514Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003693_1221099 Drosophila melanogaster chromosome 3R, sec
gb:AE014297_113910596325.6348-572200-266+3874Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003693_1221098 Drosophila melanogaster chromosome 3R, sec
gb:CP000010_86518596326.868-211583-629-1740Burkholderia mallei ATCC 23344 chromosome 1, complete sequence.
gb:AE014297_113910497325.6348-572200-266+3893Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003693_1221097 Drosophila melanogaster chromosome 3R, sec
gb:AE016816_174654997328.9101-2081875-1910+21963Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence.
gb:AE013599_113305898325.6315-581820-907+3980Drosophila melanogaster chromosome 2R, complete sequence.>gb:AE013599_1133059 Drosophila melanogaster chromosome 2R, com
gb:RNFB_213483399327.4450-560352-389+3739R.norvegicus mRNA for fertilin beta.
sp|Q63202|AD02_RAT100327.4450-560350-387+3737ADAM 2 precursor (A disintegrin and metalloproteinase domain 2) (Fertilin beta subunit) (PH-30) (PH30) (PH30-beta).
gb:BC073996_1989211101329.6315-57594-182+3845Homo sapiens discs, large homolog 5 (Drosophila), mRNA (cDNA clone IMAGE:6178261), partial cds.
gb:AL391421_1926908102329.6315-575129-217+3880Human DNA sequence from clone RP11-126H7 on chromosome 10 Contains the 5' end of the DLG5 gene for discs large (Drosophi
gb:AL391421_1926907103329.6315-5751058-1146+31809Human DNA sequence from clone RP11-126H7 on chromosome 10 Contains the 5' end of the DLG5 gene for discs large (Drosophi
gb:AL391421_1926906104329.6315-5751168-1256+31919Human DNA sequence from clone RP11-126H7 on chromosome 10 Contains the 5' end of the DLG5 gene for discs large (Drosophi
gb:AF352034_1898621105329.6315-5751058-1146+31809Homo sapiens DLG5 mRNA, complete cds.
gb:AF352033_1898620106329.6315-5751058-1146+31809Homo sapiens DLG5 gene, exons 2 through 32 and complete cds.
gb:AB091676_1872174107329.6315-5751013-1101+31764Homo sapiens mRNA for discs large protein lp-dlg, complete cds.
gb:AB011155_1864315108329.6315-575530-618+31281Homo sapiens mRNA for KIAA0583 protein, partial cds.
gb:AY596297_632121109329.6430-57658-106-1325Haloarcula marismortui ATCC 43049 chromosome I, complete sequence.
pir|T00346|T00346110329.6315-575530-618+31281hypothetical protein KIAA0583 - human (fragment)
sp|Q8TDM6|DLG5_HUMAN111329.6315-5751058-1146+31809Discs, large homolog 5 (Placenta and prostate DLG) (Discs large protein P-dlg).