Clone JMFF041F12 [sequences]

previous contigF:001114 contigR:010125
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
pir|T49208|T4920811795e-4466-6533-193+34851e-15407-604236-301-1305hypothetical protein F27K19.140 - Arabidopsis thaliana>gb:ATF27K19_1550241 Arabidopsis thaliana DNA chromosome 3, BAC cl
gb:AP004366_184084521489e-3578-6563-201+31942e-18413-604243-306-1312Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04.
gb:AC108503_17385333751e-12114-54831-170+33929e-18413-604209-272-1278Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence.>gb:AC121361_1740126 Oryza sativ
gb:AY678298_16219932942e-18392-60426-97-198Lycopersicon esculentum clone 56B23 chromosome 6, genomic sequence.
gb:AY751580_16267075450.001537-65391-129+37334.7422-604173-231-1237Phytophthora sojae putative nuclear LIM interactor-interacting protein (NIF5) gene, complete cds.
gb:AY751573_16267006450.001537-65391-129+36332.8422-604173-231-1237Phytophthora infestans putative nuclear LIM factor interactor-interacting protein hyphal form (NIFH1) mRNA, complete cds
gb:AY751577_16267044466e-04522-656198-242+3335Phytophthora sojae nuclear LIM factor interactor-interacting protein (NIF2) gene, complete cds.
gb:AY751569_16266967450.001522-653160-203+3297Phytophthora infestans putative nuclear LIM factor interactor-interacting protein spore-specific form (NIFS) mRNA, compl
gb:CR382135_16682838440.002519-656228-273+3365Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii.
gb:AY751578_16267059440.002522-653199-242+3336Phytophthora sojae nuclear LIM factor interactor-interacting protein (NIF3) gene, complete cds.
gb:AY751576_162670310440.002522-653199-242+3336Phytophthora sojae nuclear LIM factor interactor-interacting protein (NIF1) gene, complete cds.
gb:AE017349_175886411440.003519-653478-522+3613Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence.
pir|D86421|D8642112440.003429-65385-153+3247hypothetical protein F1N18.16 - Arabidopsis thaliana>gb:AE005172_891828 Arabidopsis thaliana chromosome 1, top arm compl
gb:AB012245_151177013430.005513-653125-175+3272Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRA19.
gb:CR548612_137519214430.005501-65652-117+3276Paramecium tetraurelia macronuclear largest chromosome, complete sequence.
sp|Q09695|YA22_SCHPO15430.005531-653194-234+3325Hypothetical protein C2F7.02c in chromosome I.>pir|T38550|S58146 hypothetical protein SPAC2F7.02c - fission yeast (Schi
gb:AY751571_162669816420.007522-653188-231+3325Phytophthora infestans putative nuclear LIM factor interactor-interacting protein cleavage-specific form (NIFC2) mRNA, c
gb:AY751572_162669917420.009531-653154-194+3299Phytophthora infestans putative nuclear LIM factor interactor-interacting protein cleavage-specific form (NIFC3) mRNA, c
gb:AY751570_162669718420.009531-653205-245+3339Phytophthora infestans putative nuclear LIM factor interactor-interacting protein cleavage-specific form (NIFC1) mRNA, c
gb:AY693081_162312819410.016519-653260-304+3397Saccharomyces cerevisiae clone FLH113579.01X YLR019W gene, complete cds.
pir|S64841|S6484120410.016519-653260-304+3397hypothetical protein YLR019w - yeast (Saccharomyces cerevisiae)>gb:SCYLR019W_1713421 S.cerevisiae chromosome XII reading
gb:AE013599_113068721410.021537-653149-187+3293Drosophila melanogaster chromosome 2R, complete sequence.>gb:AE003836_1227019 Drosophila melanogaster chromosome 2R, sec
gb:AE014296_113452222400.027531-65397-137+3236Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003477_1211821 Drosophila melanogaster chromosome 3L, sec
gb:AE017344_175626023390.060537-653362-400+31305Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence.
gb:CR382130_166279124390.060531-656395-436+3528Yarrowia lipolytica chromosome D of strain CLIB99 of Yarrowia lipolytica.
pir|C86421|C8642125390.060537-653143-181+3278F1N18.17 protein - Arabidopsis thaliana>gb:AE005172_891827 Arabidopsis thaliana chromosome 1, top arm complete sequence.
gb:AY280863_252440826390.078522-653140-183+3276Xenopus laevis NIF (NIF) mRNA, complete cds.
gb:AF189776_247921127390.10522-653128-171+3264Gallus gallus NLI-interacting factor isoform R5 (NIF) mRNA, complete cds.
gb:AF189774_247920928390.10522-653128-171+3293Gallus gallus NLI-interacting factor isoform T2 (NIF) mRNA, complete cds.
gb:MMU344340_212091229390.10522-653140-183+3276Mus musculus mRNA for Mya22 protein.
gb:HSA575645_200927430390.10522-653140-183+3276Homo sapiens mRNA for RB serine phosphatase (RBSP3 gene),.
gb:AY279532_194183431390.10522-653129-172+3265Homo sapiens small CTD phosphatase 3 mRNA, complete cds.>gb:HSA575644_2009273 Homo sapiens mRNA for RB serine phosphatas
gb:AE016814_174567232390.10519-653341-385+3478Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence.
gb:AC135918_174282733390.10537-653170-208+3307Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0115F21, complete sequence.
gb:BT009984_135735034390.10522-653123-166+3329Drosophila melanogaster RE52350 full insert cDNA.
gb:AE014296_113646935390.10522-653123-166+3329Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003529_1214258 Drosophila melanogaster chromosome 3L, sec
sp|P58465|NIF1_MOUSE36390.10522-653212-255+3348Nuclear LIM interactor-interacting factor 1 (NLI-interacting factor 1) (NIF-like protein).
sp|O15194|NIF1_HUMAN37390.10522-653204-247+3340Nuclear LIM interactor-interacting factor 1 (NLI-interacting factor 1) (NIF-like protein) (YA22 protein) (HYA22).>gb:D88
sp|Q9PTJ6|NIF1_CHICK38390.10522-653139-182+3275Nuclear LIM interactor-interacting factor 1 (NLI-interacting factor 1).>gb:AF189773_2479208 Gallus gallus NLI-interactin
gb:AY279530_194183239380.13522-65376-119+3213Homo sapiens small CTD phosphatase 1 splice variant mRNA, complete cds; alternatively spliced.
gb:AY279529_194183140380.13522-653123-166+3260Homo sapiens small CTD phosphatase 1 mRNA, complete cds; alternatively spliced.
gb:CR382134_166707541380.13519-653208-256+3375Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii.
gb:CR382126_165904642380.13519-653277-321+3414Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:CR380950_164979443380.13519-653273-317+3410Candida glabrata strain CBS138 chromosome D complete sequence.
gb:AY072140_156703344380.13540-653215-252+3376Arabidopsis thaliana unknown protein (At1g55900) mRNA, complete cds.>gb:AY122975_1579853 Arabidopsis thaliana unknown pr
sp|P58466|NIF3_MOUSE45380.13522-653124-167+3261Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-intera
sp|Q9GZU7|NIF3_HUMAN46380.13522-653124-167+3261Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-intera
gb:AE016820_174988447380.17537-653205-243+3343Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence.
gb:CR380950_164989048380.17519-653310-354+3447Candida glabrata strain CBS138 chromosome D complete sequence.
pir|S64752|S6475249380.17519-653290-334+3427hypothetical protein YLL010c - yeast (Saccharomyces cerevisiae)>gb:SCCEN12RG_1706692 S.cerevisiae DNA from CEN12 region
gb:AP003274_182698850370.23540-653200-237+3262Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01.
gb:BC089307_211076451370.30531-65379-119+3212Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2, mRNA (cDNA clone IMAGE
gb:BC065920_198695752370.30531-653138-178+3271Homo sapiens cDNA clone MGC:70608 IMAGE:5756196, complete cds.
gb:AF022231_187708853370.30531-653138-178+3271Homo sapiens unknown protein mRNA, complete cds.
gb:AF111941_124207554370.30522-653170-213+3306Dictyostelium discoideum AX4 development protein DG1148 (DG1148) gene, complete cds.
gb:AY231886_117717955370.30537-6538-46+3144Drosophila yakuba clone yak-em_CG1696 mRNA sequence.
gb:AK049271_116869756370.30531-653137-177+3270Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330018I01 product:NUCLEAR LIM INTERACTOR-INTERACT
gb:AE014298_112668857370.30537-653107-145+3243Drosophila melanogaster chromosome X, complete sequence.>gb:AE003568_1215889 Drosophila melanogaster chromosome X, secti
pir|T16371|T1637158370.30534-653103-142+3246hypothetical protein F45E12.1 - Caenorhabditis elegans>gb:U29536_1402832 Caenorhabditis elegans cosmid F45E12, complete
pir|T40330|T4033059370.30510-653337-382+3476hypothetical protein SPBC3B8.10c - fission yeast (Schizosaccharomyces pombe)>gb:SPBC3B8_1720028 S.pombe chromosome II c
sp|P38757|YHG4_YEAST60370.30537-653296-334+3446Hypothetical 50.6 kDa protein in RPL14B-GPA1 intergenic region.>pir|S46802|S46802 hypothetical protein YHR004c - yeast (
sp|O14595|NIF2_HUMAN61370.30531-653138-178+3283Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16) (Nuclear LIM interactor-intera
gb:BC076658_255940762370.39531-653138-178+3271Xenopus tropicalis CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, mRNA (cDNA clone
gb:BC063974_255367563370.39531-653125-165+3258Danio rerio zgc:77714, mRNA (cDNA clone MGC:77714 IMAGE:7000552), complete cds.
gb:AF441288_249451364370.39531-653138-178+3271Xenopus laevis Os4 mRNA, complete cds.>gb:BC057696_2552169 Xenopus laevis Os4, mRNA (cDNA clone MGC:68415 IMAGE:6863055)
gb:NC20H10_168848065370.39537-653393-431+3531Neurospora crassa DNA linkage group V Cosmid contig 20H10.
gb:BC085649_256452666360.51537-653109-147+3245Danio rerio zgc:92207, mRNA (cDNA clone MGC:92207 IMAGE:7051951), complete cds.
gb:BC085403_256435367360.51537-653109-147+3245Danio rerio zgc:101656, mRNA (cDNA clone MGC:101656 IMAGE:7226373), complete cds.
gb:BC082639_256278768360.51537-653108-146+3244Xenopus laevis cDNA clone MGC:81552 IMAGE:6862930, complete cds.
gb:AB084264_246371269360.51537-653108-146+3244Xenopus laevis Dullard mRNA, complete cds.
gb:BC087638_211011170360.51537-65354-92+3190Rattus norvegicus cDNA clone IMAGE:7309162, partial cds.
gb:BC018265_209262171360.51537-653108-146+3244Mus musculus Dullard homolog (Xenopus laevis), mRNA (cDNA clone MGC:25664 IMAGE:4486464), complete cds.
gb:AL596185_207098572360.51537-653107-145+3243Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the 5' end of the Centb1 gene for centaurin beta 1,
gb:HSA011916_200006973360.51537-653108-146+3244Homo sapiens mRNA for hypothetical protein.
gb:BC009295_197189074360.51537-653108-146+3244Homo sapiens dullard homolog (Xenopus laevis), mRNA (cDNA clone MGC:16648 IMAGE:4123279), complete cds.
gb:AY341861_160080675360.51519-653307-351+3445Hordeum vulgare subsp. vulgare CTD-phosphatase-like protein (Cpl1) mRNA, complete cds; alternatively spliced.>gb:AY34186
pir|JC5707|JC570776360.51537-653207-245+3338HYA22 protein - human
pir|T39693|T3969377360.51543-653202-238+3452hypothetical protein SPAC17A3.01c - fission yeast (Schizosaccharomyces pombe)>gb:AB004537_1509122 Schizosaccharomyces po
gb:CR382125_165805578360.66516-650219-266+3374Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis.
gb:CEB0379_135976579351.1531-653348-388+3491Caenorhabditis elegans cosmid B0379, complete sequence.
gb:CEB0379_135976480351.1531-653202-242+3345Caenorhabditis elegans cosmid B0379, complete sequence.
pir|T18721|T1872181351.1531-653107-147+3288hypothetical protein B0379.4 - Caenorhabditis elegans
gb:CR380957_165264082342.5537-653316-354+3464Candida glabrata strain CBS138 chromosome K complete sequence.
gb:AY751579_162670683342.5531-653115-155+3261Phytophthora sojae putative nuclear LIM interactor-interacting protein (NIF4) gene, complete cds.
gb:AY188754_158836084342.5543-653274-310+3540Neurospora crassa TIM50 (tim50) mRNA, complete cds; nuclear gene for mitochondrial product.
gb:AF250284_22217355332.813-15316-59+197Amsacta moorei entomopoxvirus, complete genome.
gb:AC130604_174081585333.3540-653205-242+3407Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence.
gb:AC006780_120403186333.3546-653106-141+3287Caenorhabditis elegans cosmid Y47D9A, complete sequence.
gb:AC006780_120403087333.3546-653106-141+3312Caenorhabditis elegans cosmid Y47D9A, complete sequence.
gb:CR382129_166142988334.3537-653329-367+3465Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
gb:CR382125_165825789334.3543-653220-256+3480Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis.
pir|T52387|T5238790334.3546-653147-182+3307hypothetical protein MMB12.6 [imported] - Arabidopsis thaliana>gb:AP000417_1820108 Arabidopsis thaliana genomic DNA, chr
gb:AP003222_182553591335.6519-653292-336+3439Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08.
gb:AY751574_162670192335.6531-65365-105+3211Phytophthora infestans putative nuclear LIM factor interactor-interacting protein hyphal form (NIFH2) mRNA, complete cds
sp|Q9P376|FCP1_SCHPO93335.6546-653223-258+3723RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (CTD phosphatase fcp1).>gb:SPAC19B12_1716903 S.p
gb:AP004001_18361828328.1215-31674-113+2162Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03.
gb:AF265225_178188694327.3546-653116-151+3409Aspergillus nidulans CTD phosphatase-like protein (pod40) gene, partial cds.
gb:AC125735_120814795327.3537-653352-390+3738Leishmania major strain Friedlin chromosome 3, complete sequence.
gb:AE014296_113399496327.3543-653235-271+3409Drosophila melanogaster chromosome 3L, complete sequence.>gb:AE003467_1211293 Drosophila melanogaster chromosome 3L, sec
gb:CEF40F11_136370797329.5168-2931528-1569+31607Caenorhabditis elegans cosmid F40F11, complete sequence.
gb:AE005173_89346998329.5540-653215-257+3414Arabidopsis thaliana chromosome 1, bottom arm complete sequence.>gb:AC002304_1530193 Genomic sequence for Arabidopsis th
pir|T22028|T2202899329.5168-2931514-1555+31593hypothetical protein F40F11.2 - Caenorhabditis elegans