Clone JMFF036E20 [sequences]

previous contigF:004178 contigR:singlet
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:OSJN00175_169621121172e-25374-565218-281+21742e-12195-458332-416-1669Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence.
gb:AP005808_185821531156e-25374-565224-287+23642e-09195-458335-420-1678Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20.
gb:OSJN00292_169807211172e-25374-565218-281+25566e-07288-458332-384-11673Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence.
gb:AY133723_158154341055e-22374-565220-283+22658e-10240-458331-402-1662Arabidopsis thaliana auxin response factor 1 (At1g59750) mRNA, complete cds.
sp|Q8L7G0|ARFA_ARATH51055e-22374-565220-283+24629e-09240-458331-405-1665Auxin response factor 1.>pir|D96621|D96621 auxin response factor 1 [imported] - Arabidopsis thaliana>gb:AE005173_893658
sp|Q9XED8|ARFI_ARATH18872e-16374-565212-273+28420.012216-458320-398-1638Auxin response factor 9.>pir|T08917|T08917 auxin response factor 9 - Arabidopsis thaliana>gb:ATCHRIV60_1546281 Arabidops
pir|T47975|T4797519863e-16374-565224-285+26420.007177-458343-428-1613auxin response factor-like protein - Arabidopsis thaliana>gb:ATF15G16_1548709 Arabidopsis thaliana DNA chromosome 3, BAC
sp|Q9C5W9|ARFR_ARATH20863e-16374-565224-285+27420.007177-458332-417-1602Auxin response factor 18.>gb:AY059746_1564603 Arabidopsis thaliana auxin response factor ARF18 (At3g61830) mRNA, complet
gb:AF140228_17715299942e-18374-565244-307+222341.9249-458355-422-1857Oryza sativa (indica cultivar-group) putative auxin response factor 1 mRNA, partial cds.
gb:OSA306306_169245410942e-18374-565228-291+223341.9249-458339-406-1836Oryza sativa subsp. japonica mRNA for auxin response factor 1 (arf1 gene).
gb:BT001072_163532711933e-18374-565260-323+238329.6252-458371-437-1678Arabidopsis thaliana At5g62000/mtg10_20 mRNA, complete cds.>gb:AF378862_1793447 Arabidopsis thaliana AT5g62000/mtg10_20
sp|Q94JM3|ARFB_ARATH12933e-18374-565260-323+239329.6252-458371-437-1859Auxin response factor 2 (ARF1-binding protein) (ARF1-BP).>gb:AB016880_1513032 Arabidopsis thaliana genomic DNA, chromoso
pir|A84904|A8490421825e-15374-565241-302+210400.046315-458349-394-1622hypothetical protein At2g46530 [imported] - Arabidopsis thaliana>gb:AC006418_1534128 Arabidopsis thaliana chromosome 2 c
sp|Q9ZPY6|ARFK_ARATH22825e-15374-565220-281+211400.046315-458328-373-1601Auxin response factor 11.
gb:AY255705_159312615894e-17374-565235-298+233327.4207-458346-427-1840Mangifera indica auxin response factor-like protein (ARF1) mRNA, complete cds.
gb:AC023913_153925255626e-09374-565234-297+212390.079219-458344-428-1620Arabidopsis thaliana chromosome 1 BAC F7P12 genomic sequence, complete sequence.
pir|C86468|C8646854634e-09374-565220-283+216380.18219-458330-414-1600probable auxin response factor, 53188-50111 [imported] - Arabidopsis thaliana>gb:AE005172_892239 Arabidopsis thaliana ch
sp|Q9C7I9|ARFT_ARATH59628e-09374-565222-283+215390.079219-458330-414-1606Putative auxin response factor 20.
sp|Q9C8N7|ARFV_ARATH58628e-09374-565220-281+217380.18219-458328-412-1598Putative auxin response factor 22.>gb:AY669796_1620761 Arabidopsis thaliana clone C105354 ARF22 (At1g34390) mRNA, comple
sp|Q9C8N9|ARFU_ARATH64611e-08374-565222-283+214390.079219-458330-414-1606Putative auxin response factor 21.
gb:AY902381_16320896995e-20374-56591-154+2202Triticum aestivum auxin response factor 2 mRNA, partial cds.
gb:AY669795_162076053634e-09374-565218-281+218351.1309-458328-373-1590Arabidopsis thaliana clone C00610 ARF20 (At1g35240) mRNA, complete cds.
pir|E86468|E8646869572e-07374-565197-268+213390.079219-458315-399-1620protein F12K21.26 [imported] - Arabidopsis thaliana>gb:AE005172_892241 Arabidopsis thaliana chromosome 1, top arm comple
pir|G86476|G8647663611e-08326-562258-338+219351.5273-458386-452-1767protein F15O4.37 [imported] - Arabidopsis thaliana>gb:AE005172_892323 Arabidopsis thaliana chromosome 1, top arm complet
sp|Q9LQE3|ARFO_ARATH65611e-08374-565222-283+220351.5234-458330-407-1593Putative auxin response factor 15.
sp|Q9LQE8|ARFN_ARATH66611e-08326-562202-282+221351.5273-458330-396-1605Putative auxin response factor 14.
pir|D86473|D8647357628e-09374-565222-283+228334.3318-458330-372-161569.8K hypothetical protein - Arabidopsis thaliana>gb:AE005172_892290 Arabidopsis thaliana chromosome 1, top arm complete
gb:AP004332_18403507941e-18374-565225-288+2808Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16.
gb:AB071293_15227518941e-18374-565208-271+2791Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds.
gb:AE005172_89231862611e-08374-565222-283+236327.4309-458330-375-1570Arabidopsis thaliana chromosome 1, top arm complete sequence.>gb:AC007887_1536320 Genomic sequence for Arabidopsis thali
gb:AJ716227_181376713924e-18374-565255-318+2848Brassica napus mRNA for putative auxin response factor (ARF2 gene).
gb:AY300808_159730914894e-17374-565235-298+2326Mangifera indica auxin response factor-like protein (ARF2) mRNA, complete cds.
gb:AP001539_182128416895e-17374-565218-281+2699Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02.
gb:AB071300_152275817895e-17374-565214-277+2695Oryza sativa OsARF16 mRNA for auxin response factor 16, partial cds.
gb:OSJN00095_169482123759e-13326-565211-294+2818Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence.
gb:AB071298_152275624759e-13326-565188-271+2795Oryza sativa OsARF8 mRNA for auxin response factor 8, partial cds.
gb:AP003728_183256125742e-12374-565230-293+2917Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08.>gb:AP004989_1846778 Oryza sativa (
gb:AB071295_152275326742e-12374-565209-272+2880Oryza sativa OsARF6b mRNA for auxin response factor 6b, partial cds.
gb:AB112673_152719127733e-12356-565217-286+2916Cucumis sativus CsARF3 mRNA for auxin response factor 3, complete cds.
gb:AP004093_183759728734e-12374-565230-293+2908Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12.>gb:AP004863_1846164 Oryza sativa
gb:AB071294_152275229734e-12374-565209-272+2396Oryza sativa OsARF6a mRNA for auxin response factor 6a, partial cds.
gb:AY669788_162075330725e-12374-565225-288+2935Arabidopsis thaliana clone C105343 ARF6 (At1g30330) mRNA, complete cds.
sp|Q9ZTX8|ARFF_ARATH31725e-12374-565223-286+2933Auxin response factor 6.>pir|F86427|F86427 auxin response factor 6 (ARF6) [imported] - Arabidopsis thaliana>gb:AE005172_
gb:AB112674_152719232711e-11326-565120-203+2816Cucumis sativus CsARF4 mRNA for auxin response factor 4, complete cds.
gb:U79557_172647033711e-11356-565236-305+2890Arabidopsis thaliana IAA24 (IAA24) mRNA, partial cds.
gb:AB024026_151571034711e-11356-565216-285+2821Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15O15.
pir|T51807|T5180735711e-11356-565248-317+2902transcription factor monopteros [validated] - Arabidopsis thaliana>gb:AF037229_1763130 Arabidopsis thaliana transcriptio
pir|G86331|G8633136711e-11356-565237-306+2850IAA24 [imported] - Arabidopsis thaliana>gb:AE005172_890947 Arabidopsis thaliana chromosome 1, top arm complete sequence.
sp|Q9FGV1|ARFH_ARATH37711e-11356-565216-285+2811Auxin response factor 8.>gb:AY669790_1620755 Arabidopsis thaliana clone C105345 ARF8 (At5g37020) mRNA, complete cds.>gb:
sp|P93024|ARFE_ARATH38711e-11356-565248-317+2902Auxin response factor 5 (Transcription factor MONOPTEROS) (Auxin- responsive protein IAA24).>gb:BT002050_1635653 Arabido
gb:AB112672_152719039702e-11374-565230-293+21107Cucumis sativus CsARF2 mRNA for auxin response factor 2, complete cds.
gb:AF467900_180244840703e-11356-565239-308+2954Prunus persica clone pPn31C7 hypothetical proteins, and hypothetical transcription factor genes, complete cds.
gb:AB112671_152718941689e-11356-565216-285+21081Cucumis sativus CsARF1 mRNA for auxin response factor 1, complete cds.
gb:AP004622_184225042681e-10374-565225-288+21113Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12.>gb:AP005509_1853084 Oryza sativa (
gb:AB071297_152275543681e-10374-565208-271+21096Oryza sativa OsARF7b mRNA for auxin response factor 7b, partial cds.
gb:AB071292_152275044672e-10356-565233-302+2955Oryza sativa OsMP mRNA for Arabidopsis Monopteros-like protein, complete cds.
gb:AP005294_185003845673e-10374-565241-304+21139Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08.
gb:AP003726_183251746673e-10374-565250-313+2991Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10.>gb:AP004324_1840157 Oryza sativa (
gb:AB071296_152275447673e-10374-565212-275+21123Oryza sativa OsARF7a mRNA for auxin response factor 7a, partial cds.
pir|G86325|G8632548673e-10356-565192-261+21062hypothetical protein T29M8.9 - Arabidopsis thaliana>gb:AE005172_890883 Arabidopsis thaliana chromosome 1, top arm comple
sp|Q8RYC8|ARFS_ARATH49673e-10356-565216-285+21086Auxin response factor 19 (Auxin-responsive protein IAA22).>gb:ATU53672_1557081 Arabidopsis thaliana early auxin-induced
gb:AF042195_176362450651e-09374-565223-286+21164Arabidopsis thaliana auxin response factor 7 (ARF7) mRNA, complete cds.
gb:AY080595_156833951651e-09374-565104-167+21045Arabidopsis thaliana unknown protein (At5g20730) mRNA, partial cds.
sp|P93022|ARFG_ARATH52651e-09374-565223-286+21164Auxin response factor 7 (Non-phototropic hypocotyl 4) (BIPOSTO protein) (Auxin-responsive protein IAA21/IAA23/IAA25).>gb
pir|C86467|C8646756628e-09374-565248-309+2619hypothetical protein F23M19.4 - Arabidopsis thaliana>gb:AE005172_892231 Arabidopsis thaliana chromosome 1, top arm compl
sp|Q9XID4|ARFL_ARATH60628e-09374-565222-283+2593Putative auxin response factor 12.>gb:AY669792_1620757 Arabidopsis thaliana clone C105347 ARF12 (At1g34310) mRNA, comple
gb:AB084669_152438061611e-08374-562221-283+2648Nicotiana tabacum NtWAF mRNA for hypothetical protein, complete cds.
gb:AF186466_177514767602e-08374-565223-287+21165Arabidopsis thaliana non-phototropic hypocotyl 4 (NPH4) gene, complete cds.
gb:AF022368_176198568602e-08374-565223-287+21165Arabidopsis thaliana BIPOSTO (BIP) mRNA, complete cds.
gb:AY669793_162075870573e-07377-565223-283+2505Arabidopsis thaliana clone C105348 (B) ARF13 (At1g34170) mRNA, complete cds.
pir|H86465|H8646571573e-07377-565171-231+2479F12G12.1 protein - Arabidopsis thaliana>gb:AE005172_892220 Arabidopsis thaliana chromosome 1, top arm complete sequence.
sp|Q9FX25|ARFM_ARATH72573e-07377-565225-285+2623Putative auxin response factor 13.
gb:AB112675_152719373541e-06374-565265-328+2733Cucumis sativus CsARF5 mRNA for auxin response factor 5, complete cds.
gb:AY376128_160354874542e-06374-565185-248+2645Triticum aestivum ETTIN-like auxin response factor (ETT1-alpha) mRNA, partial cds.
sp|Q9ZTX9|ARFD_ARATH75542e-06374-559273-333+2788Auxin response factor 4.>gb:AB011483_1511498 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9.>gb:AY080832_
gb:AC124143_174042376511e-05374-565238-301+2719Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence.
gb:AB071290_152274877511e-05374-565238-301+2712Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1, complete cds.
gb:OSJN00127_169534378502e-05356-565233-301+2954Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence.
gb:AY680406_162208179472e-04377-517223-269+2479Arabidopsis thaliana ARF13 (At1g34170) mRNA, complete cds.
gb:AB071291_152274980450.001374-565243-306+2718Oryza sativa OsETTIN2 mRNA for Arabidopsis ETTIN-like protein 2, complete cds.
gb:AY376129_160354981420.007374-565196-259+2632Triticum aestivum ETTIN-like auxin response factor (ETT2-alpha) mRNA, partial cds.
gb:ATAC002343_15427849400.027216-452181-257-1497Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence.
gb:AY376130_160355082400.034374-565107-170+2537Triticum aestivum ETTIN-like auxin response factor (ETT-L alpha) mRNA, partial cds.
gb:ATU89296_155736983390.075374-562255-317+2608Arabidopsis thaliana auxin response transcription factor 3 (ARF3) mRNA, complete cds.
pir|T03278|T0327884390.075374-562255-317+2608gene ETTIN protein - Arabidopsis thaliana>gb:AF007788_1760933 Arabidopsis thaliana ETTIN gene, complete cds.
sp|O23661|ARFC_ARATH85390.075374-562255-317+2608Auxin response factor 3 (ETTIN protein).>pir|E84750|E84750 hypothetical protein At2g33860 [imported] - Arabidopsis thali
pir|E96503|E9650386380.13437-565183-223+2330protein F9C16.11 [imported] - Arabidopsis thaliana>gb:AE005173_892589 Arabidopsis thaliana chromosome 1, bottom arm comp
gb:AC132485_174114587360.37374-541141-196+2599Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence.
gb:AP003249_182627288350.63374-565287-350+2731Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05.>gb:AP003268_1826793 Oryza sativa (
gb:BC059204_255232189341.836-128536-566-2991Danio rerio zgc:66433, mRNA (cDNA clone MGC:66433 IMAGE:2599700), complete cds.
gb:OSJN00022_169345024333.3234-386180-226-1739Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence.
gb:AE017325_44348125333.3358-576106-175+1274Listeria monocytogenes str. 4b F2365, section 4 of 10 of the complete genome.>gb:AE017262_1075837 Listeria monocytogenes
pir|S28030|S2803026333.3234-386179-225-1737DNA-binding protein Gt-2 - rice>gb:OSGT2_1693023 O.sativa gt-2 gene.
pir|AH1203|AH120327333.3358-576106-175+1274transketolase homolog lmo1032 [imported] - Listeria monocytogenes (strain EGD-e)>gb:AL591977_535523 Listeria monocytogen
gb:AF432849_179954429335.6171-32016-65-189Prunus mume clone PMSRN-5 S-RNase gene, partial cds.
pir|H83036|H8303690333.142-17693-137+3463probable two-component sensor PA4886 [imported] - Pseudomonas aeruginosa (strain PAO1)>gb:AE004901_59118 Pseudomonas aer
gb:AP005839_185883291334.1199-2646-27+1425Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0044K01.
gb:AP003407_182893192334.112-188193-256+3474Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07.
gb:PFA929352_139300193334.130-128122-154-21559Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4.
gb:AP003722_183240130327.4195-34410-59-1136Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07.
gb:AF487915_180433331327.4171-32015-64-1165Prunus dulcis RNase (S) gene, S11 allele, partial cds.>gb:AF510415_1807185 Prunus dulcis cultivar Rumbeta RNase (S) gene
gb:AE017351_175951932327.4171-36568-141-1492Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence.
gb:AB031815_151862234327.4171-32030-79-1132Prunus avium gene for S1-RNase, partial cds.
gb:AB028153_151780935327.4171-32048-97-1226Prunus avium mRNA for S1-RNase, complete cds.>gb:PAV298310_1698974 Prunus avium mRNA for RNase S1 (S1 gene).
gb:BC082708_256285137329.6189-392341-403-1431Xenopus laevis Proline rich protein, mRNA (cDNA clone MGC:86383 IMAGE:7011150), complete cds.
gb:AE016959_102182694325.478-18513-48+3167Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC091749_1735017 Oryza sativa chromosome 10
pir|T30613|T3061395325.436-104186-208-2297hypothetical protein 11L - Molluscum contagiosum virus 1>gb:MCU60315_2442136 Molluscum contagiosum virus subtype 1, comp
gb:AP005823_185849896327.012-16722-68+3222Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07.
pir|T42987|T4298797327.036-113152-179-2447hypothetical protein 73 - ateline herpesvirus 3 (strain 73)>gb:AF083424_2191589 Ateline herpesvirus 3 complete genome.
sp|Q01033|VG48_SHV2198327.036-128672-702-2797Hypothetical gene 48 protein.>pir|A36811|A36811 hypothetical protein ORF48 - saimiriine herpesvirus 1 (strain 11)>gb:HS
gb:OCU85787_144277799329.215-17642-87+3602Oryctolagus cuniculus glycoprotein Muc1 mRNA, partial cds.
gb:SGU40027_183203100329.215-194787-847+31575Streptococcus gordonii DL1 3-phosphoglycerate kinase (pgk) gene, partial cds; streptococcal surface protein A precursor