Clone JMFF035F17 [sequences]

previous contigF:001236 contigR:011596
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AB016876_151297531232e-27257-54122-108+241071e-22253-618200-310-1334Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21.>gb:AY091034_1574263 Arabidopsis thaliana unknown protein
gb:AY086395_157144421232e-27257-54121-107+251072e-22253-618199-309-1333Arabidopsis thaliana clone 249321 mRNA, complete sequence.
gb:AY093171_157512511271e-28257-53817-103+2121032e-21442-642184-250-1312Arabidopsis thaliana unknown protein (At3g28920) mRNA, complete cds.>gb:AY128820_1580900 Arabidopsis thaliana unknown pr
gb:AY730338_162543871102e-23260-54114-101+211141e-24235-636154-282-1290Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence.
gb:AC146506_174459161116e-24260-54114-105+221111e-23259-636160-279-1291Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete sequence.
gb:FBI18578_1678866111085e-23383-54117-69+231081e-22415-627137-207-1241Flaveria bidentis partial mRNA for ZF-HD homeobox protein (hb1 gene), clone FbHB1.
gb:FBI18580_167886851132e-24311-54144-121+2141024e-21424-621219-285-1339Flaveria bidentis mRNA for ZF-HD homeobox protein (hb3 gene), clone FbHB3.
gb:FTR18577_1679469121056e-22383-54142-94+261072e-22415-627159-229-1263Flaveria trinervia mRNA for ZF-HD homeobox protein (hb1 gene) clone FtHB1.
gb:AP005636_185519241132e-24293-5359-91+225903e-17445-618129-186-1263Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02.
pir|T49956|T4995681102e-23257-53820-107+226881e-16448-618179-235-1271hypothetical protein F8M21.100 - Arabidopsis thaliana>gb:ATF8M21_1551259 Arabidopsis thaliana DNA chromosome 5, BAC clon
gb:AP004702_184362491084e-23383-54139-91+227873e-16445-618243-300-1359Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03.>gb:AP005159_1848440 Oryza sativa (
pir|F96717|F96717101084e-23383-54131-83+228867e-16448-618156-212-1242hypothetical protein F24J1.29 [imported] - Arabidopsis thaliana>gb:AE005173_894544 Arabidopsis thaliana chromosome 1, bo
gb:AP004643_184254215858e-16383-53863-112+2131033e-21430-648216-288-1290Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10.
gb:AP005676_185582320819e-15383-53857-106+281064e-22430-639208-277-1279Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1005_D12.
pir|T05568|T0556814865e-16383-53849-98+219965e-19430-642149-219-1220hypothetical protein F22K18.140 - Arabidopsis thaliana>gb:ATCHRIV61_1546349 Arabidopsis thaliana DNA chromosome 4, conti
gb:AY091515_157466022802e-14383-53887-136+2151011e-20424-639212-286-1310Arabidopsis thaliana hypothetical protein At2g02540/T822.16 mRNA, complete cds.
pir|T00609|T0060923802e-14383-53887-136+2161011e-20424-639212-286-1310hypothetical protein At2g02540 [imported] - Arabidopsis thaliana>gb:AC004136_1531460 Arabidopsis thaliana chromosome 2 B
gb:FBI18579_167886721802e-14383-53844-93+217998e-20430-618174-236-1237Flaveria bidentis mRNA for ZF-HD homeobox protein (hb2 gene), clone FbHB2.
gb:AB011479_151144417842e-15383-53875-124+223926e-18433-618191-252-1279Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5.>gb:BT002385_1635988 Arabidopsis thaliana putative protein
pir|G96782|G9678227796e-14383-53876-125+218964e-19412-618240-308-1309hypothetical protein F22H5.4 [imported] - Arabidopsis thaliana>gb:AE005173_895065 Arabidopsis thaliana chromosome 1, bot
gb:AC120988_174003724803e-14383-53845-93+220942e-18436-618172-232-1255Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence.
gb:AC007858_153626925803e-14383-538166-214+221942e-18436-618293-353-1376Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I, complete sequence.
gb:FBI18581_167886939703e-11449-5411-31+2111041e-21232-621129-254-1259Flaveria bidentis partial mRNA for ZF-HD homeobox protein (hb4 gene), clone FbHB4.
pir|A86279|A8627926794e-14383-53890-139+222943e-18421-618218-283-1312F14L17.21 protein - Arabidopsis thaliana>gb:AE005172_890437 Arabidopsis thaliana chromosome 1, top arm complete sequence
gb:AB011483_151150113924e-18383-54137-89+234802e-14412-618147-215-1223Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9.
gb:AP007251_186339116841e-15383-54140-87+232842e-15442-645151-217-1232Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone:OSJNOa234E14.
gb:OSJN00050_169390919825e-15383-53523-67+231851e-15445-621162-220-1283Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence.>gb:OSJN00063_1694179 Oryza sativa g
gb:AF480496_180374418824e-15383-541163-212+233843e-15409-636312-387-1427Oryza sativa clone BAC 49D11, complete sequence.>gb:AP005323_1850642 Oryza sativa (japonica cultivar-group) genomic DNA,
pir|C84563|C8456330755e-13383-53882-131+224912e-17427-630194-261-1262hypothetical protein At2g18350 [imported] - Arabidopsis thaliana>gb:AC006439_1534292 Arabidopsis thaliana chromosome 2 c
gb:AY086020_157108135719e-12383-53860-109+229859e-16424-627178-244-1249Arabidopsis thaliana clone 20695 mRNA, complete sequence.
pir|T08410|T0841036719e-12383-53860-109+230859e-16424-627178-244-1249hypothetical protein F18B3.170 - Arabidopsis thaliana>gb:ATF18B3_1549093 Arabidopsis thaliana DNA chromosome 3, BAC clon
gb:AY695729_162351131742e-12383-53515-63+236804e-14424-618106-171-1182Glycine max zinc finger homeodomain protein SZF-HD1 mRNA, complete cds.
gb:AY695730_162351233732e-12383-53511-59+235803e-14424-618100-165-1176Glycine max zinc finger homeodomain protein SZF-HD2 mRNA, complete cds.
gb:AC091532_173481740696e-11383-53812-59+237799e-14448-621118-181-1238Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence.
gb:AY084367_156945837702e-11383-53864-111+238658e-10439-615180-238-1242Arabidopsis thaliana clone 105566 mRNA, complete sequence.
gb:AB007647_151018838702e-11383-53864-111+239658e-10439-615180-238-1242Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB21.>gb:BT002832_1636425 Arabidopsis thaliana clone RAFL14-80
gb:AE005172_89046441619e-09383-5357-50+240504e-05448-627103-164-1168Arabidopsis thaliana chromosome 1, top arm complete sequence.>gb:AC006917_1534667 Genomic sequence for Arabidopsis thali
gb:AY193456_158870571063e-22412-62126-96-1132Lactuca saligna genotype US93UC10 ZF-HD homeobox protein-like protein gene, partial cds.>gb:AY193457_1588706 Lactuca sal
gb:AY207409_158956791057e-22412-62120-90-1128Lactuca sativa clone 06_658_GRN SNP-based marker.>gb:AY207410_1589568 Lactuca sativa clone 01_658_DIA SNP-based marker.
gb:AY193452_1588701101057e-22412-62126-96-1132Lactuca sativa cultivar Diana ZF-HD homeobox protein-like protein gene, partial cds.>gb:AY193453_1588702 Lactuca sativa
gb:AY085327_157039928772e-13383-53838-87+2101Arabidopsis thaliana clone 14583 mRNA, complete sequence.
pir|G96775|G9677529772e-13383-53839-88+2102hypothetical protein F1M20.34 [imported] - Arabidopsis thaliana>gb:AE005173_895009 Arabidopsis thaliana chromosome 1, bo
gb:AY086885_157192532742e-12383-53833-83+2100Arabidopsis thaliana clone 29087 mRNA, complete sequence.>gb:AP000386_1819931 Arabidopsis thaliana genomic DNA, chromoso
gb:AP005636_185519134733e-12383-53524-82+2113Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02.
sp|P22810|HMOC_DROME41380.13115-64265-221-1671Homeotic protein orthodenticle (Ocelliless protein).>pir|A35912|A35912 homeotic protein orthodenticle - fruit fly (Droso
gb:PFMAL13_119154542360.50256-615250-353-13381Plasmodium falciparum 3D7 chromosome 13, *** SEQUENCING IN PROGRESS ***, 33 ordered pieces.
gb:BT011185_135779243350.85115-61867-215-1542Drosophila melanogaster RE10280 full insert cDNA.
gb:AF254265_125620044350.85433-6548-83-196Procambarus clarkii engrailed 2 mRNA, partial cds.
gb:AF254263_125619845350.85433-6548-83-196Porcellio scaber engrailed 2 mRNA, partial cds.
gb:AF286591_125898346351.1448-642115-179-1317Pristionchus pacificus homeodomain protein VAB-7 (vab-7) mRNA, complete cds.
gb:MMU48737_212163447351.5244-56772-172-1496Mus musculus serine/threonine-protein kinase PRP4m (PRP4m) mRNA, complete cds.
gb:BC085927_210948148351.5244-567583-683-11007Rattus norvegicus PRP4 pre-mRNA processing factor 4 homolog B (yeast) (predicted), mRNA (cDNA clone MGC:94868 IMAGE:7110
gb:BC003769_208932649351.5244-56772-172-1378Mus musculus PRP4 pre-mRNA processing factor 4 homolog B (yeast), mRNA (cDNA clone IMAGE:3488391), complete cds.
gb:AF033663_205168650351.5244-567399-499-1823Mus musculus gene-trap line CT 143 PRP4 protein kinase homolog (cbp143) mRNA, partial cds.
gb:HSA012214_200008551351.5202-654268-426-1436Homo sapiens mRNA for PLA-1 protein.
gb:HS1013A10_199649352351.5244-56772-172-1374Human DNA sequence from clone RP5-1013A10 on chromosome 6p24.1-25.3 Contains the 3' end of the gene for serine/threonine
gb:HS1013A10_199649253351.5244-567163-263-1587Human DNA sequence from clone RP5-1013A10 on chromosome 6p24.1-25.3 Contains the 3' end of the gene for serine/threonine
gb:BC034969_198143254351.5244-567583-683-11007Homo sapiens PRP4 pre-mRNA processing factor 4 homolog B (yeast), transcript variant 1, mRNA (cDNA clone MGC:26845 IMAGE
gb:BC009844_197230055351.5244-56772-172-1496Homo sapiens PRP4 pre-mRNA processing factor 4 homolog B (yeast), mRNA (cDNA clone IMAGE:3943395), complete cds.>gb:HSU4
gb:AL138831_192000256351.5244-567583-683-11007Human DNA sequence from clone RP3-406P24 on chromosome 6 Contains a thioredoxin-like pseudogene, the gene for thioredoxi
gb:AF162278_188708757351.5202-654268-426-1436Homo sapiens Skn-1a/Epoc-1/Oct-11 POU transcription factor mRNA, complete cds.
gb:AF133895_188559958351.5202-654268-426-1436Homo sapiens POU domain transcription factor OCT11a (OCT11) mRNA, complete cds.
gb:AB011108_186426859351.5244-567604-704-11028Homo sapiens mRNA for KIAA0536 protein, partial cds.
gb:CR859941_118404160351.5244-567583-683-11007Pongo pygmaeus mRNA; cDNA DKFZp469K1914 (from clone DKFZp469K1914).
gb:AK083926_117412061351.5244-567583-683-11007Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130063E21 product:pre-mRNA
sp|Q61136|PR4B_MOUSE62351.5244-567583-683-11007Serine/threonine-protein kinase PRP4 homolog (EC 2.7.1.37) (PRP4 pre- mRNA processing factor 4 homolog) (Pre-mRNA protei
sp|Q13523|PR4B_HUMAN63351.5244-567583-683-11007Serine/threonine-protein kinase PRP4 homolog (EC 2.7.1.37) (PRP4 pre- mRNA processing factor 4 homolog) (PRP4 kinase).>g
sp|Q9UKI9|PO23_HUMAN64351.5202-654268-426-1436POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn
gb:AP005303_185020442333.6428-54168-105+2354Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11.
gb:AY705722_134765765333.2409-61589-153-1283Oikopleura dioica Evx (Evx) gene, complete cds.
gb:AF003135_123078066333.2232-441111-181-1678Caenorhabditis elegans cosmid W03F11, complete sequence.
gb:AF003135_123077867333.2232-4411091-1161-11184Caenorhabditis elegans cosmid W03F11, complete sequence.
gb:AF003135_123077768333.2232-4411091-1161-11419Caenorhabditis elegans cosmid W03F11, complete sequence.
gb:AF003135_123077669333.2232-4411091-1161-11658Caenorhabditis elegans cosmid W03F11, complete sequence.
pir|T43169|T4316970333.2232-4411093-1163-11666hypothetical protein AF-6 - Caenorhabditis elegans>gb:AF063023_1237375 Caenorhabditis elegans AF-6 mRNA, complete cds.
gb:AF370155_179204371334.2448-588109-151-1323Arabidopsis thaliana putative 1-aminocyclopropane-1-carboxylate oxidase (At1g05010) mRNA, complete cds.
gb:AB002667_150893072334.2448-594107-151-1310Vigna angularis mRNA for ACC-oxidase, complete cds.
gb:AY345973_142919273334.2424-62459-120-1189Trichosurus vulpecula POU domain class 5 transcription factor 1-like protein (POU5F1) mRNA, partial cds.
gb:AF104006_124147774334.2433-61526-82-194Thermobia domestica engrailed-related 1 protein (en-r1) mRNA, partial cds.
gb:AE014297_114239675334.2259-45626-91-1110Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003779_1224389 Drosophila melanogaster chromosome 3R, sec
pir|JT0755|JT075576334.2448-588109-151-1323ethylene-forming enzyme - Arabidopsis thaliana>gb:ATEAT1_1548100 A.thaliana EAT1 mRNA for ethylene forming enzyme.
sp|Q06588|ACC1_ARATH77334.2448-588109-151-13231-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE).>pir|A86184|A8618
gb:BX883047_211147378335.5421-591221-283-1352Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHs
gb:AB015493_151268579335.5448-57379-116-1261Passiflora edulis PE-ACO1 mRNA for ACC oxidase, partial cds.
gb:AY055597_129120880335.5421-654117-200-1202Strigamia maritima homeodomain protein engrailed (en) mRNA, partial cds.
sp|Q05640|HMEN_ARTSF81335.5433-615250-306-1349Homeobox protein engrailed.>pir|S32040|S32040 homeotic protein engrailed - brine shrimp>gb:AFENGRAIL_1281715 A.francisca
gb:PHU19856_170019782327.2448-588109-151-1323Pelargonium hortorum 1-aminocyclopropane-1-carboxylate oxidase mRNA, complete cds.
gb:AE014297_114015883327.2271-579168-259-1475Drosophila melanogaster chromosome 3R, complete sequence.>gb:AE003721_1222151 Drosophila melanogaster chromosome 3R, sec
gb:AE014188_96802284327.2250-459424-489-12558Plasmodium falciparum 3D7 chromosome 12, complete sequence.>gb:AE014847_1229414 Plasmodium falciparum 3D7 chromosome 12,
gb:AF252853_178103085329.4445-588109-152-1321Brassica oleracea putative 1-aminocyclopropane-1-carboxylate oxidase (ACO3) mRNA, complete cds.
gb:FSY420190_167943386329.4448-543120-151-1319Fagus sylvatica mRNA for ACC oxidase 1 (aco1 gene).
gb:FSY420189_167943287329.4448-54395-126-1280Fagus sylvatica partial mRNA for ACC oxidase 1 (aco1 gene).
gb:AY647457_134398288329.4433-61588-144-1187Caenorhabditis elegans homeobox gene 16 mRNA, complete cds.>gb:L14730_1386892 Caenorhabditis elegans cosmid C13G5, compl
gb:PFMAL7P1_119185589329.4283-5703266-3376-13569Plasmodium falciparum 3D7 chromosome 7, *** SEQUENCING IN PROGRESS ***, 12 ordered pieces.
gb:AE014186_93805390329.4253-4772427-2507-13334Plasmodium falciparum 3D7 chromosome 11 complete sequence.>gb:AE014837_1228787 Plasmodium falciparum 3D7 chromosome 11 s
sp|P34326|HM16_CAEEL91329.4433-615104-160-1203Homeobox protein engrailed-like ceh-16.>pir|T15488|T15488 homeotic protein engrailed homolog - Caenorhabditis elegans
sp|P09082|GSB_DROME92329.4409-639177-250-1427Gooseberry protein (Gooseberry distal protein) (BSH9).>pir|A43698|A43698 paired box transcription factor BSH9 - fruit fl