Clone JMFF027H17 [sequences]

previous contigF:009503 contigR:009503
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AB005246_15096031741e-12161-4241-91+211302e-29157-6541-163-2163Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUP24.>gb:AY063871_1565819 Arabidopsis thaliana unknown protein
pir|T47461|T474613724e-12158-4212-85+221273e-28157-6572-148-2148hypothetical protein T14D3.150 - Arabidopsis thaliana>gb:ATT14D3_1554455 Arabidopsis thaliana DNA chromosome 3, BAC clon
gb:AY085654_15707222724e-12161-4241-91+231233e-27157-6541-163-2163Arabidopsis thaliana clone 16638 mRNA, complete sequence.
pir|D84684|D846844594e-08161-4211-88+251064e-22157-6541-162-2162hypothetical protein At2g28400 [imported] - Arabidopsis thaliana>gb:AC006283_1533975 Arabidopsis thaliana chromosome 2 c
gb:OSJN00156_16958276559e-07167-4214-93+241073e-22157-6484-174-2174Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence.
pir|T48344|T483445557e-07161-5411-131+261026e-21157-6541-166-2166hypothetical protein F15A17.260 - Arabidopsis thaliana>gb:AB005240_1509471 Arabidopsis thaliana genomic DNA, chromosome
gb:AY084825_15699088440.002230-54421-130+27982e-19163-58521-166-2168Arabidopsis thaliana clone 118778 mRNA, complete sequence.
pir|D85058|D850589440.002230-54421-130+28982e-19163-58521-166-2202hypothetical protein AT4g04630 [imported] - Arabidopsis thaliana>gb:ATCHRIV13_1544307 Arabidopsis thaliana DNA chromosom
gb:BT003696_163689510430.003230-54421-130+29973e-19163-58521-166-2168Arabidopsis thaliana At4g04630 mRNA, complete cds.>gb:AK118597_1816565 Arabidopsis thaliana At4g04630 mRNA for unknown p
pir|T49104|T4910411420.005251-5446-107+210943e-18163-5646-143-2181hypothetical protein AT4g21970 - Arabidopsis thaliana>gb:ATCHRIV56_1546034 Arabidopsis thaliana DNA chromosome 4, contig
pir|T05479|T0547912420.005251-5446-107+211943e-18163-5646-143-2241hypothetical protein T8O5.180 - Arabidopsis thaliana>gb:ATT8O5_1556524 Arabidopsis thaliana DNA chromosome 4, BAC clone
gb:AP006168_18612267511e-05233-52631-133+212821e-14160-58231-169-2170Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02.
gb:AY120720_157960213400.030161-5351-143+213767e-13163-6541-181-2183Arabidopsis thaliana putative protein (At4g21930) mRNA, complete cds.>gb:BT000027_1634305 Arabidopsis thaliana putative
pir|T05475|T0547514400.030161-53511-153+214767e-13163-65411-191-2193hypothetical protein T8O5.140 - Arabidopsis thaliana>gb:ATCHRIV56_1546030 Arabidopsis thaliana DNA chromosome 4, contig
pir|F86250|F8625026332.1218-53867-158+215721e-11163-59767-199-2201hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_890180 Arabidopsis thaliana chromosome 1, top arm com
gb:AE017240_41444215380.087219-446324-409-338380.17369-596324-409+3504Mycobacterium avium subsp. paratuberculosis str. k10, section 14 of 16 of the complete genome.>gb:AE016958_1057846 Mycob
gb:BC059189_255231417350.56300-452178-232-339351.1363-515178-232+3690Danio rerio zgc:64189, mRNA (cDNA clone MGC:64189 IMAGE:6798261), complete cds.
gb:AP003762_183311218350.56176-39459-137-140351.1421-63959-137+1306Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456F09.
gb:NEU66220_15229420350.73300-45559-115-341351.5360-51559-115+3290Nannocystis exedens unknown protein, partial cds and microsatellite sequence 7A140.
sp|P07725|CD8A_RAT21350.73351-431144-170-342351.5384-464144-170+3236T-cell surface glycoprotein CD8 alpha chain precursor (CD8 antigen 32 kDa chain) (OX-8 membrane antigen).>pir|A24637|A24
gb:NCB16M17_168940322350.96300-452203-257-343351.9363-515203-257+31325Neurospora crassa DNA linkage group V BAC clone B16M17.
gb:AF134579_177102419350.73303-5276-79-346342.5360-48588-132+3274Zea mays clone AGPZm1 arabinogalactan protein (agp) mRNA, partial cds.
gb:AE016959_102311716682e-10157-303131-177-2177Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC024594_1539342 Oryza sativa chromosome 10
gb:BA000040_73407523341.3312-452165-208-347342.5363-503165-208+3326Bradyrhizobium japonicum USDA 110 DNA, complete genome.
gb:AF272349_189412724341.6330-44687-128-348343.3369-48587-128+3193Homo sapiens quaking protein 3 (QK3) mRNA, partial cds.
gb:AP003611_183133117666e-10157-57391-219-2219Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08.
gb:PCU14009_169938725332.1300-44069-107-350334.3375-51569-107+3145Pyrus communis arabinogalactan-protein (AGP) mRNA, complete cds.
gb:AX025504_145696327332.8162-269257-289+352335.6546-653257-289-3455Sequence 30 from Patent WO0032789.>gb:AF193790_1775561 Fragaria vesca alcohol acyltransferase mRNA, complete cds.
pir|C75513|C7551329333.6310-444335-379+153337.3371-505335-379-1479probable ferredoxin/ferredoxin-NADP reductase - Deinococcus radiodurans (strain R1)>gb:AE001908_40773 Deinococcus radiod
gb:AY086990_157202618651e-09163-432115-201-2203Arabidopsis thaliana clone 30230 mRNA, complete sequence.
pir|T02137|T0213719651e-09163-432115-201-2203hypothetical protein F8K4.12 - Arabidopsis thaliana>gb:AE005173_893862 Arabidopsis thaliana chromosome 1, bottom arm com
gb:AP000370_181976920651e-09157-303195-243-2243Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2.
gb:AF424599_179893821651e-09157-303195-243-2243Arabidopsis thaliana AT3g15040/K15M2_18 mRNA, complete cds.
gb:AY088491_157351022651e-09157-303195-243-2243Arabidopsis thaliana clone 7140 mRNA, complete sequence.
gb:AF031250_176254030324.8310-43827-68+154329.5377-50527-68-1124Lophopyrum elongatum dehydrin-/LEA group 2-like protein (ESI18-5) mRNA, complete cds.
gb:BX569690_77550032324.8219-428199-265-355329.5387-596199-265+3496Synechococcus sp. WH8102 complete genome; segment 2/7.
sp|Q82BB8|FAH1_STRAW33324.8307-435192-237+156329.5380-508192-237-13553-oxoacyl-[acyl-carrier-protein] synthase III protein 1 (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III 1) (KAS III 1).>gb
gb:OSJN00112_169512123621e-08157-303164-208-2209Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence.
pir|T04818|T0481824612e-08163-56415-142-2144hypothetical protein F10M23.290 - Arabidopsis thaliana>gb:ATCHRIV66_1546576 Arabidopsis thaliana DNA chromosome 4, conti
gb:AP005320_185055725604e-08160-303153-195-2196Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03.
gb:AP003224_182557826564e-07163-300219-262-2262Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10.
gb:AC134237_174168327552e-06157-303152-196-2197Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence.
pir|F86419|F8641928552e-06163-6637-137-2140hypothetical protein F15D2.20 - Arabidopsis thaliana>gb:AE005172_891814 Arabidopsis thaliana chromosome 1, top arm compl
gb:OSJN00141_169559129543e-06157-303195-245-2245Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13, complete sequence.
pir|T02322|T0232230522e-05163-30388-133-2136hypothetical protein At2g34340 [imported] - Arabidopsis thaliana>gb:AC004481_1531735 Arabidopsis thaliana chromosome 2 c
gb:AE016959_102256331513e-05157-303200-252-2252Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AE017094_1752382 Oryza sativa (japonica cult
gb:AC111015_173881632504e-05163-30094-139-2142Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence.>gb:AC121365_1740182 Oryza sativ
gb:AP002899_182368533482e-04163-30365-106-2109Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01.>gb:AP003343_1828353 Oryza sativa (
gb:AP003076_182464334474e-04163-5643-134-2142Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12.
gb:HVU310379_168266335450.002163-30387-135-2138Hordeum vulgare mRNA for putative nuclear protein (s40 gene).
gb:AP002817_182284536440.003157-303120-164-2164Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11.
gb:AP005176_184879437410.027163-56413-154-2158Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06.>gb:AP005196_1849274 Oryza sat
gb:AE012466_28269516380.11309-542315-397-3449Xanthomonas campestris pv. campestris str. ATCC 33913, section 374 of 460 of the complete genome.>gb:AE008922_915977 Xan
gb:BT004703_163773744351.9163-30064-103-2106Arabidopsis thaliana At4g18980 gene, complete cds.>gb:AK118401_1816379 Arabidopsis thaliana At4g18980 mRNA for unknown p
pir|T05035|T0503545351.9163-30086-125-2128hypothetical protein F13C5.150 - Arabidopsis thaliana>gb:ATCHRIV49_1545699 Arabidopsis thaliana DNA chromosome 4, contig
gb:AF062655_205292128333.629-403175-309-1897Mus musculus plenty-of-prolines-101 mRNA, complete cds.
gb:AP002899_182368249334.3163-30382-127-2130Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01.>gb:AP003343_1828350 Oryza sativa (
gb:AB012245_151176451334.3163-30073-111-2114Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRA19.
gb:AE017343_175530431324.8306-533595-664-3768Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence.
gb:AY510475_235469334326.2303-4551070-1121-32321Gallid herpesvirus 2 clone Md11BAC replication intermediate, complete genome.
gb:AF243438_222047435326.2303-4551070-1121-32321Gallid herpesvirus 2 serotype 1 isolate Md5, complete genome.>gb:AF243438_2220492 Gallid herpesvirus 2 serotype 1 isolat
gb:AC137616_174360536326.2306-4463-48-378Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0069I13, complete sequence.
gb:AE014298_112570637326.2330-437560-602-3955Drosophila melanogaster chromosome X, complete sequence.>gb:AE003498_1212715 Drosophila melanogaster chromosome X, secti
gb:BA000040_73438138326.2302-41516-53+2422Bradyrhizobium japonicum USDA 110 DNA, complete genome.
gb:AP006618_55720539326.2363-4523335-3363-37192Nocardia farcinica IFM 10152 DNA, complete genome.
gb:GHU17705_240374040328.1312-419752-797-31417Gallid herpesvirus 1 internal short repeat region, IPC4 gene, partial cds.
gb:AF147806_220346541328.1312-4191658-1703-32323Gallid herpesvirus 2, complete genome.>gb:AF147806_2203477 Gallid herpesvirus 2, complete genome.
gb:BC026989_197886142328.1219-44922-99-3255Homo sapiens oligodendrocyte transcription factor 1, mRNA (cDNA clone MGC:30174 IMAGE:4944525), complete cds.
gb:AP005859_185913543328.1327-4373-43-372Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04.
gb:AP004646_184259144328.1309-42283-123-3283Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12.>gb:AP005440_1851791 Oryza sativa
gb:AP004192_183881645328.1278-40340-83+2137Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10.
gb:AP000570_182033946328.1209-364267-323-1443Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10.
gb:AY462122_160753347328.1318-42274-108-3536Arabidopsis thaliana protein phosphatase 2A beta (At5g28850) mRNA, complete cds.
gb:AY063937_156588448328.1318-42274-108-3536Arabidopsis thaliana putative protein phosphatase 2A regulatory subunit B (At5g28900) mRNA, complete cds.>gb:AY096482_15
gb:AC078893_154154949328.1306-44071-115-3532Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence.
gb:AE016959_102308650328.1306-44071-115-3578Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence.>gb:AC078829_1541480 Oryza sativa chromosome 10
sp|Q8TAK6|OLG1_HUMAN51328.1219-44938-115-3271Oligodendrocyte transcription factor 1 (Oligo1).>gb:HSM805549_1187584 Homo sapiens mRNA; cDNA DKFZp547G055 (from clone D
sp|Q02362|ICP4_GAHVG52328.1312-419750-795-31415Trans-acting transcriptional activator protein ICP4 (Immediate-early protein IE175).>pir|A42991|EDBEGA immediate-early p
gb:AP003238_182597653269.7290-382349-376-1432Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10.