Clone JMFF011C14 [sequences]

previous contigF:008570 contigR:008570
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb:AK175297_181728512462e-6415-581311-507+312471e-64136-687352-545-3545Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-73-G18.
gb:AY035063_155983622462e-6415-581359-555+322471e-64136-687400-593-3593Arabidopsis thaliana unknown protein (At2g30520) mRNA, complete cds.>gb:AY056359_1563667 Arabidopsis thaliana unknown pr
pir|C84709|C8470932462e-6415-581181-377+332471e-64136-687222-415-3415hypothetical protein At2g30510 [imported] - Arabidopsis thaliana>gb:U93215_1726554 Arabidopsis thaliana chromosome 2 BAC
gb:AF181683_177486142454e-6415-581359-555+342463e-64136-687400-593-3593Arabidopsis thaliana RPT2 (RPT2) mRNA, complete cds.
gb:AY144442_158352251749e-4333-485386-548+351424e-33340-687421-548-3665Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence.
gb:BT015362_164219061332e-3036-494371-533+361142e-24136-681407-604-3604Arabidopsis thaliana At5g67385 gene, complete cds.>gb:BT015895_1642513 Arabidopsis thaliana At5g67385 gene, complete cds
gb:AC105928_173826571301e-2942-488389-555+371133e-24136-681423-626-3626Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence.
gb:AC147427_174469381272e-2845-494417-576+310997e-20331-681450-576-3650Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence.
gb:AP004591_184201791263e-2845-494403-563+391002e-20331-681436-563-3641Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05.>gb:AP005250_1849561 Oryza sativa (
gb:AY144442_1583524101223e-2730-494385-532+311997e-20331-681423-532-3614Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence.
gb:AC012562_1537723111193e-2630-494361-522+312982e-19154-681399-579-3582Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence.
gb:AB012242_1511718141171e-2530-494379-550+313982e-19193-681417-591-3614Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6.
gb:AF466200_1802233121194e-2645-494403-570+314951e-18331-681436-570-3658Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins,
gb:AB013389_1512060131171e-2527-473381-530+315934e-18352-681420-530-3597Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13.
gb:AY448010S4_1606587171163e-2527-494410-579+316929e-18331-681449-579-3652Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR4.
pir|G86428|G86428151172e-2530-494400-571+320881e-16331-681438-571-3662F26G16.2 protein - Arabidopsis thaliana>gb:AE005172_891887 Arabidopsis thaliana chromosome 1, top arm complete sequence.
gb:AB006704_1509977181154e-2533-473389-545+319891e-16352-678427-545-3591Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12.
gb:AY049300_1561942201141e-2427-353424-532+318896e-17472-681463-532-3668Arabidopsis thaliana AT5g66560/K1F13_23 mRNA, complete cds.>gb:BT001071_1635326 Arabidopsis thaliana At5g66560/K1F13_23
gb:AC099043_1737016161162e-2515-353486-598+323866e-16472-684528-598-3725Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence.>gb:AC107207_1738374 Oryza sativa chromo
pir|G86160|G86160241111e-2330-494398-570+317911e-17136-681436-634-3634protein F10O3.17 [imported] - Arabidopsis thaliana>gb:AE005172_889320 Arabidopsis thaliana chromosome 1, top arm complet
gb:AP003224_1825592211124e-2445-356443-546+321882e-16469-681476-546-3659Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10.
gb:AB186127_1529351231126e-2433-497503-679+322874e-16328-687538-679-3762Oryza sativa (japonica cultivar-group) mRNA for NPH3, complete cds.
gb:OSJN00101_1694921191155e-2545-356405-508+328842e-15469-681438-508-3644Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence.
gb:AC117988_1739426221124e-2427-353372-480+325851e-15472-681411-480-3632Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence.
gb:AF180390_1774821251102e-2333-350500-605+324851e-15475-687535-605-3745Arabidopsis thaliana non-phototropic hypocotyl 3 (NPH3) mRNA, complete cds.
gb:AB008268_1510462261102e-2333-350500-605+326851e-15475-687535-605-3745Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSJ1.
pir|T48346|T48346271093e-2345-356402-505+327842e-15469-681435-505-3592photoreceptor-interacting protein-like - Arabidopsis thaliana>gb:AB005240_1509473 Arabidopsis thaliana genomic DNA, chro
gb:AC012562_1537714281085e-2321-494377-545+330827e-15211-681418-582-3612Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence.
gb:AP005919_1860143291071e-2218-389379-502+332821e-14436-681421-502-3644Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06.
pir|D84920|D84920311072e-2242-494393-560+331827e-15331-681427-560-3635hypothetical protein At2g47860 [imported] - Arabidopsis thaliana>gb:AC005309_1532462 Arabidopsis thaliana chromosome 2 c
gb:AY094473_1575768301072e-2221-494351-509+333821e-14331-681392-509-3569Arabidopsis thaliana AT3g50840/F18B3_120 mRNA, complete cds.>gb:BT004531_1637565 Arabidopsis thaliana At3g50840/F18B3_12
pir|T08405|T08405321072e-2221-494349-507+334821e-14331-681390-507-3567hypothetical protein F18B3.120 - Arabidopsis thaliana>gb:ATF18B3_1549088 Arabidopsis thaliana DNA chromosome 3, BAC clon
pir|T51779|T51779361041e-2151-494421-581+329843e-15331-687450-581-3661non-phototropic hypocotyl 3-like protein - Arabidopsis thaliana>gb:ATF28D10_1550295 Arabidopsis thaliana DNA chromosome
pir|G96701|G96701331063e-2242-347408-509+339804e-14478-666447-509-3631unknown protein, 76653-74502 [imported] - Arabidopsis thaliana>gb:AE005173_894412 Arabidopsis thaliana chromosome 1, bot
gb:AP006068_1860884351055e-2233-497506-688+336803e-14328-687541-688-3771Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05.>gb:AP006069_1860892 Oryza sativa (
gb:AC135500_1742438341054e-2221-347382-490+347758e-13478-681423-490-3634Oryza sativa chromosome 3 BAC OSJNBa0034J04 genomic sequence, complete sequence.>gb:AC136972_1743280 Oryza sativa chromo
gb:AY150514_1585079381001e-2045-347371-468+340791e-13478-687399-468-3571Arabidopsis thaliana unknown protein (At4g31820) mRNA, complete cds.
gb:AY091021_1574252391001e-2045-347371-468+341791e-13478-687399-468-3571Arabidopsis thaliana unknown protein (At4g31820) mRNA, complete cds.
pir|T06304|T06304401001e-2045-347298-395+342791e-13478-687326-395-3498hypothetical protein F11C18.20 - Arabidopsis thaliana>gb:ATCHRIV75_1547103 Arabidopsis thaliana DNA chromosome 4, contig
gb:AY054668_156332244988e-209-476352-516+337804e-14349-678399-516-3580Arabidopsis thaliana putative protein (At4g37590; F19F18.80) mRNA, complete cds.>gb:AY081497_1568757 Arabidopsis thalian
gb:AP005426_1851664371023e-2145-356384-487+346766e-13469-687415-487-3618Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04.>gb:AP005579_1854402 Oryza sativa (
pir|T04716|T0471645988e-209-476358-522+338804e-14349-678405-522-3586hypothetical protein F19F18.80 - Arabidopsis thaliana>gb:ATCHRIV87_1547713 Arabidopsis thaliana DNA chromosome 4, contig
pir|G96568|G96568411002e-2042-350202-304+343782e-13475-681236-304-3454probable non-phototropic hypocotyl, 25081-26618 [imported] - Arabidopsis thaliana>gb:AE005173_893188 Arabidopsis thalian
gb:AY084797_156988142996e-2027-416179-307+344772e-13409-681218-307-3429Arabidopsis thaliana clone 118259 mRNA, complete sequence.
pir|T45850|T4585052942e-1845-494325-461+335821e-14136-660360-526-3526hypothetical protein F3A4.50 - Arabidopsis thaliana>gb:ATF3A4_1550551 Arabidopsis thaliana DNA chromosome 3, BAC clone F
gb:AB028619_151804843996e-2027-416202-330+345772e-13409-681241-330-3452Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MQD17.>gb:AK175160_1817148 Arabidopsis thaliana mRNA for putati
pir|T50813|T5081346981e-1945-497387-542+350742e-12328-687418-542-3607non-phototropic hypocotyl 3-like protein - Arabidopsis thaliana>gb:ATF18D22_1549102 Arabidopsis thaliana DNA chromosome
pir|T02594|T0259447964e-1945-386388-499+348758e-13439-678422-499-3634hypothetical protein At2g14820 [imported] - Arabidopsis thaliana>gb:AC004705_1532116 Arabidopsis thaliana chromosome 2 c
gb:OSJN00035_169365350959e-1933-347395-500+349751e-12478-681433-500-3627Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence.
gb:AB016886_151313849957e-1933-407372-495+353703e-11418-681409-495-3559Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23.>gb:BT005761_1638685 Arabidopsis thaliana clone RAFL15-17
gb:AC144738_174416751942e-1827-332244-345+352712e-11493-681283-345-3501Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence.
gb:AY742301_117992570527e-06366-4916-47+381102e-23136-4596-114-3114Malus x domestica phototropic response-like protein mRNA, partial cds.
gb:AP001298_182098748965e-1936-395404-523+354667e-10430-681440-523-3588Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F20C19.
pir|H84619|H8461955864e-1645-419350-473+351729e-12406-678384-473-3481hypothetical protein At2g23050 [imported] - Arabidopsis thaliana>gb:AC004401_1531653 Arabidopsis thaliana chromosome 2 c
gb:AP005903_185985054928e-189-395391-523+359621e-08430-681436-523-3594Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11.>gb:AP005969_1860420 Oryza sativa (
gb:OSJN00002_169308253926e-1827-494357-526+361612e-08331-681396-526-3566Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence.
gb:AY054694_156334856825e-1518-377366-486+355651e-09448-678410-486-3579Arabidopsis thaliana photoreceptor-interacting protein-like (At5g67440; K8K14.18) mRNA, complete cds.>gb:AY128721_158080
gb:AB007645_151016257825e-1518-377366-486+356651e-09448-678410-486-3579Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8K14.
gb:BT012660_164173058826e-1536-392329-449+363536e-06433-681365-449-3521Arabidopsis thaliana At3g19850 gene, complete cds.
gb:AB025631_151656059826e-1536-392362-482+365536e-06433-681398-482-3554Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPN9.>gb:AK175315_1817303 Arabidopsis thaliana mRNA for hypoth
gb:AY080713_156843560811e-1436-404363-480+364536e-06421-681399-480-3525Arabidopsis thaliana unknown protein (At1g50280) mRNA, complete cds.>gb:BT003005_1636587 Arabidopsis thaliana clone U180
gb:AP003747_183280462726e-1239-344393-494+360612e-08481-684427-494-3547Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01.
pir|T51462|T5146264694e-1142-476338-487+358636e-09349-687373-487-3548hypothetical protein K10A8_60 - Arabidopsis thaliana>gb:ATK10A8_1553509 Arabidopsis thaliana DNA chromosome 5, BAC clone
gb:ATAC009895_154307165664e-1045-476286-425+357642e-09349-666328-425-3484Arabidopsis thaliana chromosome III BAC T21P5 genomic sequence, complete sequence.
gb:AB023039_151541963711e-1127-368363-476+362543e-06457-678403-476-3625Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21.
gb:AP003960_183572361725e-1236-395258-381+369496e-05430-681294-381-3473Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1612_A04.>gb:AP004235_1839102 Oryza sativa
gb:AY040058_156055666665e-1036-299332-419+373440.003526-681368-419-3506Arabidopsis thaliana unknown protein (At3g22104) mRNA, complete cds.>gb:AF360210_1791164 Arabidopsis thaliana unknown pr
pir|T46056|T4605667558e-0724-353201-309+368505e-05472-666244-309-3517hypothetical protein T16K5.250 - Arabidopsis thaliana>gb:ATT16K5_1554603 Arabidopsis thaliana DNA chromosome 3, BAC clon
gb:AY360388_160217771529e-06219-36213-60+366521e-05463-60613-60-3158Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12, complete sequence.>gb:AY360389_1602182 Oryza sati
gb:AC119291_173967872512e-05243-4431-74+367512e-05382-5821-74-3166Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence.
gb:AP004044_183681773481e-04243-4011-52+370481e-04424-5821-52-3137Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1125_C01.>gb:AP005480_1852636 Oryza sativa
gb:AP005693_185616674464e-04243-3621-40+371465e-04463-5821-40-3138Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0061E21.>gb:AP006480_1862086 Oryza sat
gb:AP003985_183594875458e-04159-34410-72+372450.001481-66610-72-3258Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01.
gb:AP004023_183651476400.021222-4856-96+374400.030340-6036-96-3185Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09.>gb:AP004079_1837379 Oryza sativa
gb:BC058674_210340678360.51287-4571264-1319+275360.73368-5381264-1319-21581Mus musculus cDNA sequence BC058674, mRNA (cDNA clone IMAGE:6831208), partial cds.
gb:AK173130_207006479360.51287-4571531-1586+276360.73368-5381531-1586-21848Mus musculus mRNA for mKIAA1205 protein.
gb:AK032894_116311980360.51287-45716-71+277360.73368-53816-71-2333Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clo
gb:AP005679_185585284334.3290-44298-155+278336.2383-53598-155-2302Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07.
pir|B96539|B9653968533e-0636-194330-382+3409hypothetical protein F14I3.11 [imported] - Arabidopsis thaliana>gb:AE005173_892950 Arabidopsis thaliana chromosome 1, bo
gb:AP002523_182236569527e-0633-194243-296+3307Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10.
gb:OSJN00097_169486677390.0463-251773-855+33307Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence.
gb:AE017251_41660281332.554-2842063-2148+33320Treponema denticola ATCC 35405, section 6 of 10 of the complete genome.>gb:AE017226_1070198 Treponema denticola ATCC 354
gb:TYMVXX_245616682334.33-338995-1100+31844Turnip yellow mosaic virus genome.
gb:AF035403_218323783334.33-338995-1100+31844Turnip yellow mosaic Blue Lake isolate, complete genome.
gb:AB011480_151145785334.387-248686-743+31342Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7.
pir|S19151|S1915186334.33-338995-1100+31985hypothetical protein 221 - turnip yellow mosaic virus
sp|P28477|POLR_TYMVC87334.33-338995-1100+31844RNA replicase polyprotein (EC 2.7.7.48).>gb:TYMVCG_2456163 Turnip yellow mosaic virus complete RNA genome.
sp|P20128|POLR_TYMVA88334.33-338995-1100+31844RNA replicase polyprotein (EC 2.7.7.48).>pir|JQ0109|RRWPTM genome polyprotein - turnip yellow mosaic virus (strain Austr
sp|P10358|POLR_TYMV89334.33-338995-1100+31844RNA replicase polyprotein (EC 2.7.7.48).>pir|S01956|S01956 hypothetical protein, 195K - turnip yellow mosaic virus
pir|A70329|A7032990325.69-227193-256+3260hypothetical protein aq_324 - Aquifex aeolicus>gb:AE000684_26012 Aquifex aeolicus VF5 section 16 of 109 of the complete
gb:AY013789_207390491327.418-26924-107+3798Mus musculus protocadherin beta 7 mRNA, complete cds.
gb:AF326300_206306192327.418-26924-107+3798Mus musculus protocadherin-betaG (Pcdhb4b) mRNA, complete cds.
gb:AK046463_116778893327.418-26955-138+3829Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230387P06 product:protocad
gb:AK034205_116367594327.418-26924-107+3798Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330163J18 product:protocadherin be
gb:AK029340_116144995327.418-26955-138+3829Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4832440N17 product:protocadherin beta 7,
gb:AF030881_246950296329.6212-424271-332+2371Takifugu rubripes sushi-ichi retrotransposon, complete sequence.
gb:AY013791_207390697329.618-26924-107+3793Mus musculus protocadherin beta 9 mRNA, complete cds.>gb:BC055319_2101977 Mus musculus protocadherin beta 9, mRNA (cDNA
gb:AK043979_116676998329.618-26955-138+3829Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830062G18 product:protocadherin bet
gb:AK032626_116300199329.618-26924-107+3793Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6432401H06 product:protocadherin
gb:BX571966_794887100329.672-431109-227+3284Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence.