Clone JMSF032A01 [sequences]

contigF:009178 contigR:014107

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
ref\|XP_009776250.1\|	2	193	3e-53	224-700	62-219	+2	1	206	1e-57	179-730	671-854	-2	857	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Nicotiana sylvestris]
ref\|XP_009602546.1\|	1	197	2e-54	224-700	54-211	+2	3	202	4e-56	170-730	663-849	-2	849	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Nicotiana tomentosiformis]
ref\|XP_006367266.1\|	3	192	8e-53	224-700	64-221	+2	4	201	1e-55	170-730	673-859	-2	859	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Solanum tuberosum]
ref\|XP_009602545.1\|	4	190	5e-52	224-700	54-218	+2	2	202	3e-56	170-730	670-856	-2	856	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Nicotiana tomentosiformis]
ref\|XP_004246707.1\|	5	186	2e-50	224-700	64-223	+2	5	188	4e-51	170-730	675-857	-2	857	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Solanum lycopersicum]
gb\|EYU41644.1\|	14	139	6e-34	248-700	66-217	+2	6	165	9e-43	179-730	660-838	-2	847	hypothetical protein MIMGU_mgv1a001284mg [Erythranthe guttata]
ref\|XP_011094749.1\|	10	144	2e-35	248-700	66-217	+2	7	158	3e-40	194-730	660-837	-2	848	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Sesamum indicum]
emb\|CDP06691.1\|	13	140	3e-34	260-700	71-218	+2	10	152	2e-38	194-730	670-844	-2	853	unnamed protein product [Coffea canephora]
ref\|XP_008366699.1\|	6	149	4e-37	224-700	69-223	+2	12	139	1e-33	194-730	666-845	-2	851	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Malus domest
ref\|XP_007208081.1\|	7	149	4e-37	224-700	66-220	+2	17	136	1e-32	194-730	626-803	-2	809	hypothetical protein PRUPE_ppa001520mg [Prunus persica] gb\|EMJ09280.1\| hypothetical protein PRUPE_ppa001520mg [Prunus pe
ref\|XP_009342254.1\|	8	149	4e-37	224-700	68-222	+2	18	135	4e-32	194-730	665-844	-2	850	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Pyrus x bretschne
ref\|XP_008242918.1\|	9	145	5e-36	224-700	66-220	+2	15	138	2e-33	194-730	639-818	-2	824	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Prunus mume]
ref\|XP_002273255.1\|	25	127	2e-29	251-700	62-206	+2	8	155	4e-39	194-730	656-835	-2	842	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Vitis vinifera] emb\|CBI3261
ref\|XP_010653452.1\|	26	127	2e-29	251-700	62-206	+2	9	154	4e-39	194-730	666-845	-2	852	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Vitis vinifera]
ref\|XP_010260148.1\|	12	142	1e-34	248-697	69-218	+2	26	131	6e-31	173-667	695-857	-2	857	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Nelumbo nucifera]
gb\|KJB62520.1\|	16	137	6e-33	224-691	74-228	+2	36	128	8e-30	173-730	677-862	-2	862	hypothetical protein B456_009G420800 [Gossypium raimondii]
gb\|KJB62519.1\|	17	137	7e-33	224-691	74-228	+2	37	128	8e-30	173-730	676-861	-2	861	hypothetical protein B456_009G420800 [Gossypium raimondii]
ref\|XP_011466642.1\|	23	129	4e-30	224-700	67-221	+2	22	132	2e-31	194-730	640-820	-2	826	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Fragaria vesca subsp. vesca
ref\|XP_011466641.1\|	24	129	4e-30	224-700	67-221	+2	23	132	3e-31	194-730	643-823	-2	829	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Fragaria vesca subsp. vesca
gb\|KHG21135.1\|	20	135	3e-32	224-691	74-228	+2	44	125	9e-29	173-730	676-861	-2	861	hypothetical protein F383_28297 [Gossypium arboreum]
ref\|XP_007027210.1\|	15	137	4e-33	224-691	72-226	+2	51	121	2e-27	173-724	676-858	-2	858	Tetratricopeptide repeat (TPR)-like superfamily protein, putative [Theobroma cacao] gb\|EOY07712.1\| Tetratricopeptide re
gb\|KDP29059.1\|	18	136	1e-32	242-700	66-218	+2	52	121	2e-27	194-730	670-846	-2	853	hypothetical protein JCGZ_16448 [Jatropha curcas]
ref\|XP_011004144.1\|	19	136	1e-32	260-700	75-221	+2	56	117	5e-26	194-730	671-847	-2	854	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Populus euphratica]
gb\|KDO51902.1\|	31	120	4e-27	266-697	73-216	+2	29	131	8e-31	173-730	670-850	-2	850	hypothetical protein CISIN_1g003082mg [Citrus sinensis]
ref\|XP_006428907.1\|	34	116	9e-26	266-697	73-216	+2	30	130	1e-30	173-730	670-850	-2	850	hypothetical protein CICLE_v10011055mg [Citrus clementina] ref\|XP_006480569.1\| PREDICTED: pentatricopeptide repeat-conta
ref\|XP_008447192.1\|	40	105	4e-22	251-700	75-224	+2	11	140	6e-34	194-730	675-848	-2	850	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Cucumis melo]
ref\|XP_006381507.1\|	22	132	2e-31	260-700	71-217	+2	57	113	1e-24	194-730	667-821	-2	828	pentatricopeptide repeat-containing family protein [Populus trichocarpa] gb\|ERP59304.1\| pentatricopeptide repeat-contain
ref\|XP_010100837.1\|	37	106	2e-22	233-691	44-194	+2	16	136	1e-32	194-730	643-811	-2	822	hypothetical protein L484_003853 [Morus notabilis] gb\|EXB84820.1\| hypothetical protein L484_003853 [Morus notabilis]
ref\|XP_010037924.1\|	32	117	5e-26	260-700	66-212	+2	43	125	9e-29	194-730	664-820	-2	820	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Eucalyptus grandis]
ref\|XP_010037923.1\|	33	117	5e-26	260-700	66-212	+2	45	125	9e-29	194-730	666-822	-2	822	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Eucalyptus grandis]
ref\|XP_004167767.1\|	48	101	9e-21	239-700	69-222	+2	14	139	1e-33	194-730	679-853	-2	855	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Cucumis sati
ref\|XP_004142106.1\|	49	101	1e-20	239-700	69-222	+2	13	139	1e-33	194-730	673-847	-2	849	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Cucumis sativus] gb\|KGN54190.1\| h
ref\|XP_010696356.1\|	47	102	7e-21	260-691	84-228	+2	19	134	6e-32	194-730	684-857	-2	864	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Beta vulgaris subsp. vulgaris]
gb\|KFK24734.1\|	55	99.0	8e-20	257-691	88-233	+2	20	134	6e-32	194-730	688-866	-2	868	hypothetical protein AALP_AA8G017500 [Arabis alpina]
ref\|XP_006287051.1\|	54	99.4	5e-20	257-691	80-225	+2	21	133	1e-31	194-712	683-856	-2	858	hypothetical protein CARUB_v10000200mg [Capsella rubella] gb\|EOA19949.1\| hypothetical protein CARUB_v10000200mg [Capsell
ref\|XP_009122751.1\|	52	99.8	5e-20	257-691	72-218	+2	24	132	5e-31	194-667	695-851	-2	853	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Brassica rapa]
dbj\|BAC42187.2\|	45	103	3e-21	257-691	80-225	+2	34	128	6e-30	194-667	703-850	-2	852	unknown protein [Arabidopsis thaliana]
ref\|NP_195903.2\|	44	103	3e-21	257-691	80-225	+2	35	128	7e-30	194-667	703-850	-2	852	pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp\|Q8GYL7.3\|PP361_ARATH RecName: Full=Pentatricopepti
emb\|CDX70342.1\|	53	99.4	5e-20	257-691	72-218	+2	28	131	7e-31	194-667	695-851	-2	853	BnaA10g26910D [Brassica napus]
emb\|CAB86037.1\|	46	102	6e-21	257-700	80-228	+2	33	128	6e-30	194-667	649-796	-2	798	putative protein [Arabidopsis thaliana]
emb\|CDY10420.1\|	56	99.0	8e-20	257-691	72-218	+2	25	131	5e-31	194-730	673-851	-2	853	BnaCnng03210D [Brassica napus]
ref\|XP_006398740.1\|	50	100	2e-20	257-691	78-223	+2	31	129	5e-30	194-667	705-861	-2	863	hypothetical protein EUTSA_v10012661mg [Eutrema salsugineum] gb\|ESQ40193.1\| hypothetical protein EUTSA_v10012661mg [Eutr
ref\|XP_006398739.1\|	51	100	2e-20	257-691	78-223	+2	32	129	5e-30	194-667	700-856	-2	858	hypothetical protein EUTSA_v10012661mg [Eutrema salsugineum] gb\|ESQ40192.1\| hypothetical protein EUTSA_v10012661mg [Eutr
ref\|XP_010423813.1\|	58	96.7	5e-19	257-691	80-225	+2	27	131	6e-31	194-667	703-856	-2	858	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Camelina sativa] ref\|XP_010423814
ref\|XP_010490749.1\|	59	95.9	9e-19	257-691	83-228	+2	38	127	2e-29	194-667	706-859	-2	861	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Camelina sativa]
ref\|XP_010558288.1\|	42	103	2e-21	224-691	81-232	+2	53	119	8e-27	194-667	709-863	-2	868	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Tarenaya hassleriana]
ref\|XP_010558287.1\|	43	103	2e-21	224-691	81-232	+2	54	119	8e-27	194-667	713-867	-2	872	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Tarenaya hassleriana]
ref\|XP_010452144.1\|	60	95.1	1e-18	257-691	81-226	+2	42	126	4e-29	194-667	704-857	-2	859	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Camelina sativa]
ref\|XP_010920950.1\|	41	105	7e-22	233-700	61-216	+2	58	110	1e-23	194-730	642-819	-2	827	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Elaeis guineensis
ref\|XP_002525196.1\|	62	90.5	5e-17	404-700	52-150	+2	48	124	2e-28	194-667	625-779	-2	786	pentatricopeptide repeat-containing protein, putative [Ricinus communis] gb\|EEF37162.1\| pentatricopeptide repeat-contai
ref\|XP_008792463.1\|	38	106	2e-22	251-700	63-212	+2	61	102	8e-21	176-730	660-843	-2	846	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Phoenix dactylifera]
ref\|XP_010260149.1\|	11	142	6e-35	248-697	69-218	+2	73	63.2	4e-08	530-730	670-740	-2	748	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Nelumbo nucifera]
gb\|KDO51903.1\|	29	120	3e-27	266-697	73-216	+2	64	82.8	2e-14	482-730	670-750	-2	750	hypothetical protein CISIN_1g003082mg [Citrus sinensis]
ref\|XP_006828302.1\|	61	94.7	2e-18	257-700	67-214	+2	60	106	3e-22	173-667	695-855	-2	855	hypothetical protein AMTR_s00023p00232870 [Amborella trichopoda] gb\|ERM95718.1\| hypothetical protein AMTR_s00023p0023287
ref\|XP_009409549.1\|	35	108	4e-23	251-700	76-228	+2	62	90.9	4e-17	194-667	705-845	-2	854	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Musa acuminata subsp. malaccensis]
ref\|XP_007162713.1\|	69	74.3	1e-11	284-691	53-179	+2	49	123	5e-28	194-730	629-808	-2	809	hypothetical protein PHAVU_001G174000g [Phaseolus vulgaris] gb\|ESW34707.1\| hypothetical protein PHAVU_001G174000g [Phase
ref\|XP_003554352.1\|	73	69.3	4e-10	272-691	55-185	+2	47	125	1e-28	194-730	635-810	-2	811	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Glycine max]
gb\|KHN02376.1\|	74	69.3	4e-10	272-691	55-185	+2	46	125	1e-28	194-730	608-783	-2	784	Pentatricopeptide repeat-containing protein, chloroplastic [Glycine soja]
ref\|XP_008447199.1\|	39	105	4e-22	251-700	75-224	+2	63	83.2	1e-14	512-730	675-748	-2	748	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Cucumis melo]
ref\|XP_004493936.1\|	77	59.3	7e-07	332-700	59-178	+2	41	126	4e-29	194-730	626-794	-2	799	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Cicer arietinum]
gb\|AES81784.2\|	79	55.1	2e-05	380-700	72-176	+2	55	117	4e-26	194-730	623-803	-2	808	PPR containing plant-like protein [Medicago truncatula]
gb\|KDO51904.1\|	30	120	3e-27	266-697	73-216	+2	81	50.4	7e-04				723	hypothetical protein CISIN_1g003082mg [Citrus sinensis]
ref\|XP_003625566.1\|	80	55.1	2e-05	380-700	72-176	+2	59	108	5e-23	194-730	623-824	-2	829	Pentatricopeptide repeat-containing protein [Medicago truncatula]
ref\|XP_002465430.1\|	63	83.2	1e-14	257-700	59-206	+2	65	73.6	2e-11	194-679	659-814	-2	821	hypothetical protein SORBIDRAFT_01g038770 [Sorghum bicolor] gb\|EER92428.1\| hypothetical protein SORBIDRAFT_01g038770 [So
ref\|XP_004984815.1\|	67	79.3	2e-13	257-700	57-204	+2	67	69.7	3e-10	194-691	648-811	-2	818	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Setaria italica]
ref\|XP_008660262.1\|	65	79.3	2e-13	257-700	59-206	+2	74	62.8	6e-08	194-679	659-818	-2	825	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Zea mays]
ref\|XP_008660263.1\|	66	79.3	2e-13	257-700	59-206	+2	75	62.4	7e-08	194-679	623-782	-2	789	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Zea mays]
ref\|NP_001049766.1\|	71	71.6	8e-11	257-700	62-208	+2	69	68.2	9e-10	194-658	670-812	-2	819	Os03g0284900 [Oryza sativa Japonica Group] gb\|ABF95346.1\| pentatricopeptide, putative, expressed [Oryza sativa Japonica
ref\|XP_008660264.1\|	64	79.3	2e-13	257-700	59-206	+2	76	60.1	4e-07	194-679	496-655	-2	662	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X3 [Zea mays]
ref\|XP_006651267.1\|	76	64.7	1e-08	266-700	57-200	+2	66	71.2	1e-10	194-658	662-804	-2	811	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Oryza brachyantha]
dbj\|BAJ93534.1\|	68	77.8	8e-13	257-700	87-233	+2	79	57.0	5e-06	386-661	698-790	-2	837	predicted protein [Hordeum vulgare subsp. vulgare] dbj\|BAJ89545.1\| predicted protein [Hordeum vulgare subsp. vulgare]
ref\|XP_003558181.1\|	75	68.9	4e-10	257-700	87-233	+2	72	65.1	1e-08	194-682	686-842	-2	849	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Brachypodium distachyon]
ref\|XP_006388159.1\|	21	127	6e-32	260-682	71-211	+2							211	hypothetical protein POPTR_0308s00210g, partial [Populus trichocarpa] gb\|ERP47073.1\| hypothetical protein POPTR_0308s002
gb\|KCW49699.1\|							39	125	2e-29	194-730	414-570	-2	570	hypothetical protein EUGRSUZ_K03203 [Eucalyptus grandis]
ref\|XP_006577707.1\|							40	125	3e-29	194-730	421-596	-2	597	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Glycine max]
ref\|XP_007162712.1\|							50	121	9e-28	194-730	414-593	-2	594	hypothetical protein PHAVU_001G174000g [Phaseolus vulgaris] gb\|ESW34706.1\| hypothetical protein PHAVU_001G174000g [Phase
gb\|KDO51906.1\|	27	120	2e-27	266-697	73-216	+2							572	hypothetical protein CISIN_1g003082mg [Citrus sinensis]
gb\|KDO51905.1\|	28	120	2e-27	266-697	73-216	+2							651	hypothetical protein CISIN_1g003082mg [Citrus sinensis]
ref\|XP_008792469.1\|	36	106	2e-22	251-700	63-212	+2							721	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Phoenix dactylifera]
ref\|XP_010452143.1\|	57	95.1	2e-19	257-691	81-226	+2							329	PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like [Camelina sativa] ref\|XP_010456367
gb\|AAO17004.1\|	70	71.6	6e-11	257-700	62-208	+2							572	Hypothetical protein [Oryza sativa Japonica Group]
gb\|EEC75003.1\|	72	71.2	8e-11	257-700	62-208	+2							668	hypothetical protein OsI_11066 [Oryza sativa Indica Group]
gb\|EEE58831.1\|							68	65.9	9e-10	194-658	58-200	-2	207	hypothetical protein OsJ_10403 [Oryza sativa Japonica Group]
gb\|ABF95347.1\|							70	65.5	6e-09	194-658	302-444	-2	451	pentatricopeptide, putative, expressed [Oryza sativa Japonica Group] dbj\|BAG87554.1\| unnamed protein product [Oryza sat
gb\|AAO17007.1\|							71	65.5	9e-09	194-658	853-995	-2	1002	Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gb\|AFW88748.1\|							77	60.1	4e-07	194-679	321-480	-2	487	hypothetical protein ZEAMMB73_433087 [Zea mays] gb\|AFW88749.1\| hypothetical protein ZEAMMB73_433087 [Zea mays]
gb\|EMT08174.1\|							78	57.4	4e-06	194-661	800-934	-2	941	hypothetical protein F775_52230 [Aegilops tauschii]
ref\|XP_002965952.1\|	78	55.1	2e-05	266-700	26-173	+2							533	hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii] gb\|EFJ33372.1\| hypothetical protein SELMODRAFT_84012
gb\|EMS66958.1\|							80	53.9	5e-05	194-661	530-662	-2	669	hypothetical protein TRIUR3_24096 [Triticum urartu]
ref\|XP_002968383.1\|	81	53.1	7e-05										532	hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii] gb\|EFJ30637.1\| hypothetical protein SELMODRAFT_16966