Clone JMSF028F20 [sequences]

contigF:007904 contigR:007904
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb|EYU19240.1|12532e-81117-54836-180+311457e-40101-53236-180-3180hypothetical protein MIMGU_mgv1a014729mg [Erythranthe guttata]
emb|CDP05774.1|52474e-79114-54839-187+3111407e-38101-46067-187-3187unnamed protein product [Coffea canephora]
ref|XP_010062990.1|142431e-77126-54839-178+321424e-39101-46059-178-3178PREDICTED: protein LHCP TRANSLOCATION DEFECT [Eucalyptus grandis] gb|KCW70157.1| hypothetical protein EUGRSUZ_F03446 [Eu
ref|XP_008226815.1|32494e-80114-54828-171+3191361e-36101-46051-171-3171PREDICTED: protein LHCP TRANSLOCATION DEFECT [Prunus mume]
ref|XP_004294361.1|22503e-80114-54832-175+3231352e-36101-46055-175-3175PREDICTED: protein LHCP TRANSLOCATION DEFECT [Fragaria vesca subsp. vesca]
ref|XP_007212156.1|42496e-80114-54830-173+3211362e-36101-46053-173-3173hypothetical protein PRUPE_ppa012342mg [Prunus persica] gb|EMJ13355.1| hypothetical protein PRUPE_ppa012342mg [Prunus pe
ref|XP_004493199.1|152414e-77114-54832-177+351428e-39101-46058-177-3177PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cicer arietinum]
ref|XP_003598690.1|172418e-77114-54833-179+341425e-39101-46060-179-3179hypothetical protein MTR_3g019320 [Medicago truncatula] gb|AES68941.1| LHCP translocation defect protein, putative [Medi
ref|XP_002281441.1|122431e-77138-54835-172+3131391e-37101-46052-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera] emb|CBI23956.3| unnamed protein product [Vitis vinifera]
emb|CAN65357.1|132431e-77138-54835-172+3121391e-37101-46052-172-3172hypothetical protein VITISV_041274 [Vitis vinifera]
ref|XP_011009295.1|112437e-78129-54832-171+3141381e-37101-46052-171-3171PREDICTED: protein LHCP TRANSLOCATION DEFECT [Populus euphratica]
gb|KJB13634.1|72451e-78114-54829-172+3221362e-36101-46052-172-3172hypothetical protein B456_002G085700 [Gossypium raimondii]
ref|XP_011095364.1|192401e-76114-54836-180+3101404e-38101-46060-180-3180PREDICTED: protein LHCP TRANSLOCATION DEFECT [Sesamum indicum]
ref|XP_009799951.1|62469e-79117-54836-178+3381341e-35101-46061-178-3178PREDICTED: protein LHCP TRANSLOCATION DEFECT [Nicotiana sylvestris]
ref|NP_001236074.1|262367e-75114-54837-181+331424e-39101-46062-181-3181uncharacterized protein LOC100500557 [Glycine max] gb|ACU15672.1| unknown [Glycine max]
gb|AFK46964.1|232381e-75126-54835-175+381402e-38101-46056-175-3175unknown [Lotus japonicus]
ref|NP_001238318.1|242372e-75114-54833-177+371411e-38101-46058-177-3177uncharacterized protein LOC100499940 [Glycine max] gb|ACU14277.1| unknown [Glycine max] gb|KHN19655.1| Protein LHCP TRAN
ref|XP_002522996.1|222381e-75141-54840-175+391402e-38101-46056-175-3175conserved hypothetical protein [Ricinus communis] gb|EEF39426.1| conserved hypothetical protein [Ricinus communis]
gb|KDP39089.1|282368e-75144-54840-174+361429e-39101-46055-174-3174hypothetical protein JCGZ_00846 [Jatropha curcas]
gb|KHG23632.1|102437e-78114-54829-172+3241353e-36101-46052-172-3172lhcp translocation defect -like protein [Gossypium arboreum]
ref|XP_006370666.1|182419e-77144-54837-171+3181369e-37101-46052-171-3171hypothetical protein POPTR_0001s44690g [Populus trichocarpa] gb|ERP67235.1| hypothetical protein POPTR_0001s44690g [Popu
ref|XP_006452238.1|252373e-75156-54842-173+3151383e-37101-46053-173-3173hypothetical protein CICLE_v10009689mg [Citrus clementina] ref|XP_006493957.1| PREDICTED: protein LHCP TRANSLOCATION DEF
gb|KHG24756.1|202386e-7621-5481-173+3201361e-36101-46053-173-3173lhcp translocation defect -like protein [Gossypium arboreum]
ref|XP_010519276.1|272367e-75156-54847-178+3171375e-37101-46058-178-3178PREDICTED: protein LHCP TRANSLOCATION DEFECT [Tarenaya hassleriana]
ref|XP_009607225.1|162416e-77120-54837-178+3481325e-35101-46061-178-3178PREDICTED: protein LHCP TRANSLOCATION DEFECT [Nicotiana tomentosiformis]
ref|XP_006352499.1|82451e-78117-54831-172+3591281e-33101-46055-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Solanum tuberosum]
gb|ABK94006.1|212381e-75144-54837-171+3341348e-36101-46052-171-3171unknown [Populus trichocarpa]
gb|KJB62598.1|292362e-74114-54853-196+3251353e-36101-46076-196-3196hypothetical protein B456_009G425200 [Gossypium raimondii]
ref|XP_010327169.1|92442e-78117-54831-172+3611273e-33101-46055-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT [Solanum lycopersicum]
ref|XP_008775505.1|402301e-72138-54529-170+3161374e-37104-46051-170-3171PREDICTED: protein LHCP TRANSLOCATION DEFECT [Phoenix dactylifera]
gb|EPS57502.1|312334e-74126-5485-147+3281344e-36101-46027-147-3147hypothetical protein M569_17316, partial [Genlisea aurea]
ref|XP_007146415.1|342339e-74114-54829-172+3361341e-35101-46053-172-3172hypothetical protein PHAVU_006G038600g [Phaseolus vulgaris] gb|ESW18409.1| hypothetical protein PHAVU_006G038600g [Phase
ref|XP_009144936.1|362322e-73114-54833-176+3371341e-35101-46056-176-3176PREDICTED: protein LHCP TRANSLOCATION DEFECT [Brassica rapa] emb|CDY29612.1| BnaA05g15580D [Brassica napus]
ref|XP_009145616.1|412293e-72165-54849-177+3271354e-36152-46057-159-3177PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Brassica rapa] emb|CDY19631.1| BnaA05g20390D [Brassica napus]
ref|NP_564580.1|432293e-72156-54844-175+3331348e-36101-46055-175-3175protein GRANA DEFICIENT CHLOROPLAST 1 [Arabidopsis thaliana] sp|Q8VY88.1|LTD_ARATH RecName: Full=Protein LHCP TRANSLOCAT
ref|XP_002864707.1|392301e-72114-54834-177+3391332e-35101-46057-177-3177hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata] gb|EFH40966.1| hypothetical protein ARALYDRAF
emb|CDY29435.1|482272e-71168-54851-178+3261354e-36152-46058-160-3178BnaC05g32350D [Brassica napus]
ref|XP_006406371.1|492273e-71168-54847-174+3291354e-36152-46054-156-3174hypothetical protein EUTSA_v10021639mg [Eutrema salsugineum] gb|ESQ47824.1| hypothetical protein EUTSA_v10021639mg [Eutr
ref|XP_009417232.1|442295e-72135-54835-178+3401332e-35101-46058-178-3178PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Musa acuminata subsp. malaccensis]
emb|CDY07336.1|382301e-72114-54823-166+3471325e-35101-46046-166-3166BnaC05g26980D [Brassica napus]
ref|XP_009358134.1|332337e-74114-54829-172+3561298e-34101-46052-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri]
ref|XP_009378658.1|322345e-74114-54829-172+3581281e-33101-46052-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri] ref|XP_009368455.1| PREDICTED: protein LHCP T
ref|XP_009342580.1|352339e-74114-54829-172+3571298e-34101-46052-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri]
ref|XP_006393099.1|472281e-71153-54844-176+3441333e-35101-46056-176-3176hypothetical protein EUTSA_v10011819mg [Eutrema salsugineum] gb|ESQ30385.1| hypothetical protein EUTSA_v10011819mg [Eutr
gb|AAG50930.1|AC079284_5562282e-70156-548126-257+3531331e-34101-460137-257-3257unknown protein [Arabidopsis thaliana]
ref|XP_010488039.1|502263e-71168-54847-174+3311346e-36152-46054-156-3174PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_010509075.1|512264e-71168-54845-172+3301346e-36152-46052-154-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_010466254.1|532265e-71168-54845-172+3321346e-36152-46052-154-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_009147796.1|422293e-72114-54833-176+3511319e-35101-46056-176-3176PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Brassica rapa] emb|CDY25188.1| BnaC06g04130D [Brassica napus]
ref|XP_006298590.1|592253e-70168-54873-200+3351358e-36152-46080-182-3200hypothetical protein CARUB_v10014674mg [Capsella rubella] gb|EOA31488.1| hypothetical protein CARUB_v10014674mg [Capsell
ref|XP_006305698.1|452287e-72126-54837-177+3491326e-35101-46057-177-3177hypothetical protein CARUB_v10010432mg [Capsella rubella] gb|EOA38596.1| hypothetical protein CARUB_v10010432mg [Capsell
ref|XP_007020933.1|302353e-74114-54829-190+3651254e-32101-46052-190-3190Ankyrin repeat family protein [Theobroma cacao] gb|EOY12458.1| Ankyrin repeat family protein [Theobroma cacao]
ref|XP_008365459.1|372322e-73114-54829-172+3621273e-33101-46052-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT [Malus domestica]
emb|CDY25178.1|462281e-71156-54846-177+3541311e-34101-46057-177-3177BnaC06g04030D [Brassica napus]
ref|XP_010479551.1|542251e-70114-54834-177+3411332e-35101-46057-177-3177PREDICTED: protein LHCP TRANSLOCATION DEFECT [Camelina sativa]
ref|XP_009406499.1|522265e-71135-54830-173+3451323e-35101-46053-173-3173PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Musa acuminata subsp. malaccensis]
ref|XP_010461933.1|572242e-70156-54846-177+3421332e-35101-46057-177-3177PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_010923930.1|552242e-70138-54830-172+3431323e-35101-46052-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT [Elaeis guineensis]
ref|XP_010092116.1|602236e-70114-54832-180+3461324e-35101-46060-180-3180hypothetical protein L484_017804 [Morus notabilis] ref|XP_010102311.1| hypothetical protein L484_000390 [Morus notabilis
gb|KFK39362.1|622216e-69168-54847-174+3521311e-34152-46054-156-3174hypothetical protein AALP_AA3G234800 [Arabis alpina]
ref|XP_010500665.1|642186e-68156-54846-179+3501326e-35101-46059-179-3179PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_008385995.1|582243e-70114-54829-172+3671231e-31101-46052-172-3172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Malus domestica]
ref|XP_010267697.1|612214e-69126-54835-178+3661247e-32101-46059-178-3178PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Nelumbo nucifera]
ref|XP_010267698.1|632194e-6821-5481-175+3631251e-32101-46055-175-3175PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Nelumbo nucifera]
ref|XP_004152919.1|652171e-67144-54836-168+3641244e-32101-46051-168-3168PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cucumis sativus] ref|XP_004164338.1| PREDICTED: protein LHCP TRANSLOC
gb|KHM99596.1|692106e-65168-50055-165+3551295e-34152-46062-164-3168Protein LHCP TRANSLOCATION DEFECT [Glycine soja]
ref|XP_008463435.1|662151e-66144-54836-168+3681223e-31101-46051-168-3168PREDICTED: protein LHCP TRANSLOCATION DEFECT [Cucumis melo]
ref|XP_006858083.1|702081e-63138-54250-190+3601282e-33110-46072-189-3192hypothetical protein AMTR_s00062p00076280 [Amborella trichopoda] gb|ERN19550.1| hypothetical protein AMTR_s00062p0007628
ref|XP_010694198.1|672142e-66117-54832-170+3691201e-30101-46056-170-3170PREDICTED: protein LHCP TRANSLOCATION DEFECT [Beta vulgaris subsp. vulgaris]
gb|KJB62599.1|682162e-66144-54861-236+3761162e-28101-46076-236-3236hypothetical protein B456_009G425200 [Gossypium raimondii]
ref|XP_004957877.1|712064e-63117-54838-186+3701202e-30101-45471-186-3186PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Setaria italica]
ref|XP_002460789.1|722021e-61144-54546-183+3711181e-29104-45469-183-3184hypothetical protein SORBIDRAFT_02g034910 [Sorghum bicolor] gb|EER97310.1| hypothetical protein SORBIDRAFT_02g034910 [So
ref|NP_001144531.1|732022e-61144-54848-186+3721181e-29101-45471-186-3186hypothetical protein [Zea mays] gb|ACG41222.1| hypothetical protein [Zea mays] gb|ACN27552.1| unknown [Zea mays] tpg|DAA
dbj|BAJ89531.1|751942e-58123-54529-174+3731173e-29104-42169-174-3176predicted protein [Hordeum vulgare subsp. vulgare]
ref|XP_006657768.1|741971e-59120-53621-164+3781122e-27113-42162-164-3168PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Oryza brachyantha]
ref|XP_002972400.1|761933e-58132-53928-158+3751158e-29107-46041-160-3162hypothetical protein SELMODRAFT_228130 [Selaginella moellendorffii] gb|EFJ26486.1| hypothetical protein SELMODRAFT_22813
ref|XP_002971877.1|781912e-57132-53928-158+3741166e-29107-46041-160-3162hypothetical protein SELMODRAFT_228083 [Selaginella moellendorffii] gb|EFJ26794.1| hypothetical protein SELMODRAFT_22808
sp|A2YLX7.1|LTD_ORYSI771934e-58144-54833-171+3771131e-27101-42165-171-3172RecName: Full=Protein LHCP TRANSLOCATION DEFECT; Flags: Precursor [Oryza sativa Indica Group] sp|A3BKF2.1|LTD_ORYSJ Rec
ref|XP_003560142.1|791778e-52126-53634-169+3801036e-24152-42166-155-3174PREDICTED: protein LHCP TRANSLOCATION DEFECT [Brachypodium distachyon]
ref|XP_001769565.1|801604e-46168-5241-120+38289.05e-19155-4608-109-3120predicted protein [Physcomitrella patens] gb|EDQ65558.1| predicted protein, partial [Physcomitrella patens]
ref|XP_001694135.1|821392e-37192-50044-146+38191.71e-19167-45744-140-3167predicted protein [Chlamydomonas reinhardtii] gb|EDP03071.1| predicted protein [Chlamydomonas reinhardtii]
ref|XP_003083273.1|851354e-36126-53317-151+38386.76e-18155-42147-135-3153unnamed protein product [Ostreococcus tauri] emb|CAL57548.1| unnamed product [Ostreococcus tauri]
ref|XP_002956452.1|841371e-36162-50610-125+38482.81e-16167-45721-117-3144hypothetical protein VOLCADRAFT_121531 [Volvox carteri f. nagariensis] gb|EFJ42596.1| hypothetical protein VOLCADRAFT_12
gb|EMS68093.1|831377e-3721-5451-151+39170.93e-12104-42169-151-3153hypothetical protein TRIUR3_10983 [Triticum urartu]
ref|XP_001419268.1|861292e-33171-53330-151+38778.28e-15155-42147-135-3153predicted protein [Ostreococcus lucimarinus CCE9901] gb|ABO97561.1| predicted protein [Ostreococcus lucimarinus CCE9901]
ref|XP_005645073.1|881223e-31240-5309-105+38580.17e-16155-4099-93-3113hypothetical protein COCSUDRAFT_18502 [Coccomyxa subellipsoidea C-169] gb|EIE20529.1| hypothetical protein COCSUDRAFT_1
ref|NP_001059804.2|871255e-33309-5481-80+38677.06e-15101-3401-80-381Os07g0520800 [Oryza sativa Japonica Group] dbj|BAC79654.1| unknown protein [Oryza sativa Japonica Group] dbj|BAD30420.1|
dbj|BAF63496.1|891205e-31300-5481-84+38974.36e-14101-3491-84-384hypothetical protein [Potamogeton distinctus]
ref|XP_007513555.1|921156e-28228-54560-168+38877.03e-14155-42160-148-3169predicted protein [Bathycoccus prasinos] emb|CCO16080.1| predicted protein [Bathycoccus prasinos]
ref|XP_002503004.1|901183e-29186-53338-153+39072.01e-12155-40953-137-3158predicted protein [Micromonas sp. RCC299] gb|ACO64262.1| predicted protein [Micromonas sp. RCC299]
ref|XP_003058743.1|911161e-28153-49127-138+39270.16e-12170-42151-134-3159predicted protein [Micromonas pusilla CCMP1545] gb|EEH57198.1| predicted protein [Micromonas pusilla CCMP1545]
ref|XP_005849507.1|931051e-24183-53337-159+39360.81e-08162hypothetical protein CHLNCDRAFT_142839 [Chlorella variabilis] gb|EFN57405.1| hypothetical protein CHLNCDRAFT_142839 [Chl
gb|AAP44675.1|9655.58e-06297-377144-170+3271hypothetical protein [Oryza sativa Japonica Group]
gb|KIY98612.1|9755.51e-05360-512345-395+3410hypothetical protein MNEG_9350 [Monoraphidium neglectum]
gb|ABF99352.1|9454.77e-06297-37717-43+3219hypothetical protein LOC_Os03g58280 [Oryza sativa Japonica Group]
ref|XP_001780054.1|9552.07e-06309-4701-54+355predicted protein [Physcomitrella patens] gb|EDQ55157.1| predicted protein, partial [Physcomitrella patens]
ref|XP_004294362.1|9851.21e-04141-29640-88+3200PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12-like isoform X1 [Fragaria vesca subsp. vesca]
ref|XP_011396291.1|9947.00.00198hypothetical protein F751_1117 [Auxenochlorella protothecoides] gb|KFM23421.1| hypothetical protein F751_1117 [Auxenochl
ref|XP_009419639.1|818166798107343PREDICTED: uncharacterized protein LOC103999578 [Musa acuminata subsp. malaccensis]