Clone JMSF027O10 [sequences]

contigF:007904 contigR:007904

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
gb\|EYU19240.1\|	1	253	1e-81	117-548	36-180	+3	1	200	9e-61	236-649	40-180	-2	180	hypothetical protein MIMGU_mgv1a014729mg [Erythranthe guttata]
ref\|XP_004294361.1\|	2	250	2e-80	114-548	32-175	+3	2	197	1e-59	236-643	39-175	-2	175	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Fragaria vesca subsp. vesca]
ref\|XP_008226815.1\|	3	249	3e-80	114-548	28-171	+3	4	195	6e-59	236-643	35-171	-2	171	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Prunus mume]
ref\|XP_007212156.1\|	4	249	4e-80	114-548	30-173	+3	5	194	7e-59	236-643	37-173	-2	173	hypothetical protein PRUPE_ppa012342mg [Prunus persica] gb\|EMJ13355.1\| hypothetical protein PRUPE_ppa012342mg [Prunus pe
ref\|XP_006352499.1\|	8	245	1e-78	117-548	31-172	+3	3	195	4e-59	236-652	36-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Solanum tuberosum]
ref\|XP_009799951.1\|	6	246	6e-79	117-548	36-178	+3	9	194	2e-58	236-652	41-178	-2	178	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Nicotiana sylvestris]
ref\|XP_010327169.1\|	9	244	2e-78	117-548	31-172	+3	8	194	1e-58	236-652	36-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Solanum lycopersicum]
gb\|KJB13634.1\|	7	245	8e-79	114-548	29-172	+3	11	193	3e-58	236-646	35-172	-2	172	hypothetical protein B456_002G085700 [Gossypium raimondii]
emb\|CDP05774.1\|	5	247	3e-79	114-548	39-187	+3	16	191	2e-57	236-649	48-187	-2	187	unnamed protein product [Coffea canephora]
ref\|XP_002281441.1\|	12	243	8e-78	138-548	35-172	+3	6	194	1e-58	236-646	35-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera] emb\|CBI23956.3\| unnamed protein product [Vitis vinifera]
emb\|CAN65357.1\|	13	243	1e-77	138-548	35-172	+3	7	194	1e-58	236-646	35-172	-2	172	hypothetical protein VITISV_041274 [Vitis vinifera]
ref\|XP_011009295.1\|	11	243	5e-78	129-548	32-171	+3	10	193	2e-58	236-655	32-171	-2	171	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Populus euphratica]
ref\|XP_010062990.1\|	14	243	1e-77	126-548	39-178	+3	13	193	4e-58	236-643	43-178	-2	178	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Eucalyptus grandis] gb\|KCW70157.1\| hypothetical protein EUGRSUZ_F03446 [Eu
gb\|KHG23632.1\|	10	243	5e-78	114-548	29-172	+3	15	191	2e-57	236-646	35-172	-2	172	lhcp translocation defect -like protein [Gossypium arboreum]
ref\|XP_009607225.1\|	16	241	4e-77	120-548	37-178	+3	12	193	4e-58	236-652	41-178	-2	178	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Nicotiana tomentosiformis]
ref\|XP_003598690.1\|	17	241	5e-77	114-548	33-179	+3	14	192	5e-58	236-655	37-179	-2	179	hypothetical protein MTR_3g019320 [Medicago truncatula] gb\|AES68941.1\| LHCP translocation defect protein, putative [Medi
ref\|XP_006370666.1\|	18	241	6e-77	144-548	37-171	+3	17	191	3e-57	236-640	37-171	-2	171	hypothetical protein POPTR_0001s44690g [Populus trichocarpa] gb\|ERP67235.1\| hypothetical protein POPTR_0001s44690g [Popu
ref\|XP_004493199.1\|	15	241	3e-77	114-548	32-177	+3	21	189	2e-56	236-655	36-177	-2	177	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cicer arietinum]
gb\|AFK46964.1\|	23	238	1e-75	126-548	35-175	+3	18	189	1e-56	236-646	38-175	-2	175	unknown [Lotus japonicus]
ref\|XP_002522996.1\|	22	238	1e-75	141-548	40-175	+3	19	189	1e-56	236-643	40-175	-2	175	conserved hypothetical protein [Ricinus communis] gb\|EEF39426.1\| conserved hypothetical protein [Ricinus communis]
ref\|XP_011095364.1\|	19	240	1e-76	114-548	36-180	+3	24	187	7e-56	236-649	41-180	-2	180	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Sesamum indicum]
gb\|ABK94006.1\|	21	238	8e-76	144-548	37-171	+3	22	188	2e-56	236-640	37-171	-2	171	unknown [Populus trichocarpa]
gb\|KHG24756.1\|	20	238	4e-76	21-548	1-173	+3	23	187	5e-56	236-640	38-173	-2	173	lhcp translocation defect -like protein [Gossypium arboreum]
gb\|KDP39089.1\|	28	236	5e-75	144-548	40-174	+3	20	189	2e-56	236-640	40-174	-2	174	hypothetical protein JCGZ_00846 [Jatropha curcas]
ref\|XP_010519276.1\|	27	236	5e-75	156-548	47-178	+3	25	187	8e-56	236-628	47-178	-2	178	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Tarenaya hassleriana]
ref\|NP_001238318.1\|	24	237	2e-75	114-548	33-177	+3	27	185	4e-55	236-646	39-177	-2	177	uncharacterized protein LOC100499940 [Glycine max] gb\|ACU14277.1\| unknown [Glycine max] gb\|KHN19655.1\| Protein LHCP TRAN
ref\|NP_001236074.1\|	26	236	5e-75	114-548	37-181	+3	26	186	3e-55	236-616	55-181	-2	181	uncharacterized protein LOC100500557 [Glycine max] gb\|ACU15672.1\| unknown [Glycine max]
ref\|XP_006452238.1\|	25	237	2e-75	156-548	42-173	+3	28	185	5e-55	236-628	42-173	-2	173	hypothetical protein CICLE_v10009689mg [Citrus clementina] ref\|XP_006493957.1\| PREDICTED: protein LHCP TRANSLOCATION DEF
gb\|KJB62598.1\|	29	236	1e-74	114-548	53-196	+3	29	185	6e-55	236-640	61-196	-2	196	hypothetical protein B456_009G425200 [Gossypium raimondii]
ref\|XP_007020933.1\|	30	235	2e-74	114-548	29-190	+3	32	184	2e-54	236-646	35-190	-2	190	Ankyrin repeat family protein [Theobroma cacao] gb\|EOY12458.1\| Ankyrin repeat family protein [Theobroma cacao]
gb\|EPS57502.1\|	31	233	3e-74	126-548	5-147	+3	31	183	1e-54	236-652	7-147	-2	147	hypothetical protein M569_17316, partial [Genlisea aurea]
ref\|XP_009358134.1\|	33	233	5e-74	114-548	29-172	+3	33	183	2e-54	236-643	36-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri]
ref\|XP_009378658.1\|	32	234	3e-74	114-548	29-172	+3	35	182	3e-54	236-643	36-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri] ref\|XP_009368455.1\| PREDICTED: protein LHCP T
ref\|XP_009342580.1\|	35	233	6e-74	114-548	29-172	+3	34	183	2e-54	236-643	36-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri]
ref\|XP_007146415.1\|	34	233	6e-74	114-548	29-172	+3	36	182	3e-54	236-646	35-172	-2	172	hypothetical protein PHAVU_006G038600g [Phaseolus vulgaris] gb\|ESW18409.1\| hypothetical protein PHAVU_006G038600g [Phase
ref\|XP_008775505.1\|	40	230	9e-73	138-545	29-170	+3	30	184	7e-55	239-646	29-170	-2	171	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Phoenix dactylifera]
ref\|XP_008365459.1\|	37	232	2e-73	114-548	29-172	+3	37	182	7e-54	236-643	36-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Malus domestica]
ref\|XP_009144936.1\|	36	232	2e-73	114-548	33-176	+3	42	180	4e-53	236-631	44-176	-2	176	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Brassica rapa] emb\|CDY29612.1\| BnaA05g15580D [Brassica napus]
ref\|XP_002864707.1\|	39	230	9e-73	114-548	34-177	+3	39	181	1e-53	236-628	46-177	-2	177	hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata] gb\|EFH40966.1\| hypothetical protein ARALYDRAF
ref\|XP_009417232.1\|	44	229	3e-72	135-548	35-178	+3	38	182	8e-54	236-649	35-178	-2	178	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Musa acuminata subsp. malaccensis]
ref\|NP_564580.1\|	43	229	2e-72	156-548	44-175	+3	40	181	1e-53	236-631	43-175	-2	175	protein GRANA DEFICIENT CHLOROPLAST 1 [Arabidopsis thaliana] sp\|Q8VY88.1\|LTD_ARATH RecName: Full=Protein LHCP TRANSLOCAT
ref\|XP_009145616.1\|	41	229	2e-72	165-548	49-177	+3	44	179	1e-52	275-619	49-163	-2	177	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Brassica rapa] emb\|CDY19631.1\| BnaA05g20390D [Brassica napus]
gb\|AAG50930.1\|AC079284_5	56	228	1e-70	156-548	126-257	+3	47	180	4e-52	236-631	125-257	-2	257	unknown protein [Arabidopsis thaliana]
emb\|CDY07336.1\|	38	230	8e-73	114-548	23-166	+3	46	177	2e-52	236-631	34-166	-2	166	BnaC05g26980D [Brassica napus]
ref\|XP_006393099.1\|	47	228	8e-72	153-548	44-176	+3	43	179	9e-53	236-631	44-176	-2	176	hypothetical protein EUTSA_v10011819mg [Eutrema salsugineum] gb\|ESQ30385.1\| hypothetical protein EUTSA_v10011819mg [Eutr
ref\|XP_009406499.1\|	52	226	3e-71	135-548	30-173	+3	41	181	2e-53	236-649	30-173	-2	173	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Musa acuminata subsp. malaccensis]
ref\|XP_009147796.1\|	42	229	2e-72	114-548	33-176	+3	48	177	4e-52	236-628	45-176	-2	176	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Brassica rapa] emb\|CDY25188.1\| BnaC06g04130D [Brassica napus]
ref\|XP_006305698.1\|	45	228	5e-72	126-548	37-177	+3	50	177	7e-52	236-631	45-177	-2	177	hypothetical protein CARUB_v10010432mg [Capsella rubella] gb\|EOA38596.1\| hypothetical protein CARUB_v10010432mg [Capsell
emb\|CDY25178.1\|	46	228	7e-72	156-548	46-177	+3	49	177	5e-52	236-631	45-177	-2	177	BnaC06g04030D [Brassica napus]
emb\|CDY29435.1\|	48	227	2e-71	168-548	51-178	+3	52	177	9e-52	275-616	51-164	-2	178	BnaC05g32350D [Brassica napus]
ref\|XP_010923930.1\|	55	224	1e-70	138-548	30-172	+3	45	179	1e-52	236-646	30-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Elaeis guineensis]
ref\|XP_010488039.1\|	50	226	2e-71	168-548	47-174	+3	51	177	8e-52	275-616	47-160	-2	174	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref\|XP_006406371.1\|	49	227	2e-71	168-548	47-174	+3	53	176	9e-52	275-616	47-160	-2	174	hypothetical protein EUTSA_v10021639mg [Eutrema salsugineum] gb\|ESQ47824.1\| hypothetical protein EUTSA_v10021639mg [Eutr
ref\|XP_010509075.1\|	51	226	3e-71	168-548	45-172	+3	54	176	1e-51	275-616	45-158	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref\|XP_010466254.1\|	53	226	3e-71	168-548	45-172	+3	55	176	1e-51	275-616	45-158	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref\|XP_010479551.1\|	54	225	8e-71	114-548	34-177	+3	56	176	2e-51	236-628	46-177	-2	177	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Camelina sativa]
ref\|XP_010461933.1\|	57	224	1e-70	156-548	46-177	+3	57	176	2e-51	236-628	46-177	-2	177	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref\|XP_006298590.1\|	59	225	2e-70	168-548	73-200	+3	58	175	7e-51	275-616	73-186	-2	200	hypothetical protein CARUB_v10014674mg [Capsella rubella] gb\|EOA31488.1\| hypothetical protein CARUB_v10014674mg [Capsell
ref\|XP_008385995.1\|	58	224	2e-70	114-548	29-172	+3	60	172	4e-50	236-643	36-172	-2	172	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Malus domestica]
ref\|XP_010092116.1\|	60	223	4e-70	114-548	32-180	+3	61	172	5e-50	236-652	37-180	-2	180	hypothetical protein L484_017804 [Morus notabilis] ref\|XP_010102311.1\| hypothetical protein L484_000390 [Morus notabilis
gb\|KFK39362.1\|	62	221	4e-69	168-548	47-174	+3	59	172	3e-50	275-616	47-160	-2	174	hypothetical protein AALP_AA3G234800 [Arabis alpina]
ref\|XP_010267697.1\|	61	221	3e-69	126-548	35-178	+3	62	171	1e-49	236-646	38-178	-2	178	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Nelumbo nucifera]
ref\|XP_010267698.1\|	63	219	3e-68	21-548	1-175	+3	66	169	1e-48	236-640	36-175	-2	175	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Nelumbo nucifera]
ref\|XP_010500665.1\|	64	218	4e-68	156-548	46-179	+3	65	169	8e-49	236-628	46-179	-2	179	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref\|XP_004152919.1\|	65	217	9e-68	144-548	36-168	+3	64	169	5e-49	236-640	36-168	-2	168	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cucumis sativus] ref\|XP_004164338.1\| PREDICTED: protein LHCP TRANSLOC
ref\|XP_008463435.1\|	66	215	7e-67	144-548	36-168	+3	67	167	5e-48	236-640	36-168	-2	168	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Cucumis melo]
gb\|KJB62599.1\|	68	216	2e-66	144-548	61-236	+3	70	166	6e-47	236-640	61-236	-2	236	hypothetical protein B456_009G425200 [Gossypium raimondii]
gb\|KHM99596.1\|	69	210	4e-65	168-500	55-165	+3	63	170	2e-49	284-616	55-165	-2	168	Protein LHCP TRANSLOCATION DEFECT [Glycine soja]
ref\|XP_010694198.1\|	67	214	1e-66	117-548	32-170	+3	69	164	3e-47	236-628	45-170	-2	170	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Beta vulgaris subsp. vulgaris]
ref\|XP_006858083.1\|	70	208	9e-64	138-542	50-190	+3	68	166	2e-47	245-646	50-189	-2	192	hypothetical protein AMTR_s00062p00076280 [Amborella trichopoda] gb\|ERN19550.1\| hypothetical protein AMTR_s00062p0007628
ref\|XP_004957877.1\|	71	206	3e-63	117-548	38-186	+3	71	161	9e-46	236-640	48-186	-2	186	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Setaria italica]
ref\|XP_002460789.1\|	72	202	8e-62	144-545	46-183	+3	72	158	1e-44	239-640	46-183	-2	184	hypothetical protein SORBIDRAFT_02g034910 [Sorghum bicolor] gb\|EER97310.1\| hypothetical protein SORBIDRAFT_02g034910 [So
ref\|NP_001144531.1\|	73	202	1e-61	144-548	48-186	+3	73	158	2e-44	236-640	48-186	-2	186	hypothetical protein [Zea mays] gb\|ACG41222.1\| hypothetical protein [Zea mays] gb\|ACN27552.1\| unknown [Zea mays] tpg\|DAA
dbj\|BAJ89531.1\|	75	194	1e-58	123-545	29-174	+3	74	154	7e-43	239-655	31-174	-2	176	predicted protein [Hordeum vulgare subsp. vulgare]
ref\|XP_006657768.1\|	74	197	9e-60	120-536	21-164	+3	78	148	7e-41	248-643	29-164	-2	168	PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Oryza brachyantha]
ref\|XP_002972400.1\|	76	193	2e-58	132-539	28-158	+3	75	151	4e-42	245-652	28-158	-2	162	hypothetical protein SELMODRAFT_228130 [Selaginella moellendorffii] gb\|EFJ26486.1\| hypothetical protein SELMODRAFT_22813
sp\|A2YLX7.1\|LTD_ORYSI	77	193	3e-58	144-548	33-171	+3	76	150	2e-41	236-640	33-171	-2	172	RecName: Full=Protein LHCP TRANSLOCATION DEFECT; Flags: Precursor [Oryza sativa Indica Group] sp\|A3BKF2.1\|LTD_ORYSJ Rec
ref\|XP_002971877.1\|	78	191	1e-57	132-539	28-158	+3	77	149	2e-41	245-652	28-158	-2	162	hypothetical protein SELMODRAFT_228083 [Selaginella moellendorffii] gb\|EFJ26794.1\| hypothetical protein SELMODRAFT_22808
ref\|XP_003560142.1\|	79	177	5e-52	126-536	34-169	+3	79	135	1e-35	275-637	41-159	-2	174	PREDICTED: protein LHCP TRANSLOCATION DEFECT [Brachypodium distachyon]
ref\|XP_001769565.1\|	80	160	3e-46	168-524	1-120	+3	80	131	9e-35	272-616	1-115	-2	120	predicted protein [Physcomitrella patens] gb\|EDQ65558.1\| predicted protein, partial [Physcomitrella patens]
gb\|EMS68093.1\|	83	137	6e-37	21-545	1-151	+3	82	109	3e-26	239-655	31-151	-2	153	hypothetical protein TRIUR3_10983 [Triticum urartu]
ref\|XP_001694135.1\|	82	139	1e-37	192-500	44-146	+3	84	107	4e-25	284-592	44-146	-2	167	predicted protein [Chlamydomonas reinhardtii] gb\|EDP03071.1\| predicted protein [Chlamydomonas reinhardtii]
ref\|XP_003083273.1\|	85	135	3e-36	126-533	17-151	+3	83	108	1e-25	284-655	18-137	-2	153	unnamed protein product [Ostreococcus tauri] emb\|CAL57548.1\| unnamed product [Ostreococcus tauri]
ref\|XP_002956452.1\|	84	137	1e-36	162-506	10-125	+3	85	103	6e-24	281-592	21-124	-2	144	hypothetical protein VOLCADRAFT_121531 [Volvox carteri f. nagariensis] gb\|EFJ42596.1\| hypothetical protein VOLCADRAFT_12
ref\|XP_001419268.1\|	86	129	1e-33	171-533	30-151	+3	86	102	3e-23	284-613	30-137	-2	153	predicted protein [Ostreococcus lucimarinus CCE9901] gb\|ABO97561.1\| predicted protein [Ostreococcus lucimarinus CCE9901]
ref\|XP_005645073.1\|	88	122	2e-31	240-530	9-105	+3	87	98.6	2e-22	272-544	9-99	-2	113	hypothetical protein COCSUDRAFT_18502 [Coccomyxa subellipsoidea C-169] gb\|EIE20529.1\| hypothetical protein COCSUDRAFT_1
ref\|XP_002503004.1\|	90	118	2e-29	186-533	38-153	+3	88	94.7	2e-20	284-598	38-139	-2	158	predicted protein [Micromonas sp. RCC299] gb\|ACO64262.1\| predicted protein [Micromonas sp. RCC299]
ref\|NP_001059804.2\|	87	125	4e-33	309-548	1-80	+3	91	87.4	1e-18	236-475	1-80	-2	81	Os07g0520800 [Oryza sativa Japonica Group] dbj\|BAC79654.1\| unknown protein [Oryza sativa Japonica Group] dbj\|BAD30420.1\|
ref\|XP_003058743.1\|	91	116	8e-29	153-491	27-138	+3	89	93.2	7e-20	299-631	27-136	-2	159	predicted protein [Micromonas pusilla CCMP1545] gb\|EEH57198.1\| predicted protein [Micromonas pusilla CCMP1545]
ref\|XP_007513555.1\|	92	115	4e-28	228-545	60-168	+3	90	90.5	9e-19	284-556	60-150	-2	169	predicted protein [Bathycoccus prasinos] emb\|CCO16080.1\| predicted protein [Bathycoccus prasinos]
dbj\|BAF63496.1\|	89	120	3e-31	300-548	1-84	+3	92	84.0	3e-17	236-484	1-84	-2	84	hypothetical protein [Potamogeton distinctus]
ref\|XP_005849507.1\|	93	105	1e-24	183-533	37-159	+3	93	80.9	2e-15				162	hypothetical protein CHLNCDRAFT_142839 [Chlorella variabilis] gb\|EFN57405.1\| hypothetical protein CHLNCDRAFT_142839 [Chl
gb\|AAP44675.1\|	96	55.5	6e-06	297-377	144-170	+3							271	hypothetical protein [Oryza sativa Japonica Group]
gb\|KIY98612.1\|	97	55.5	9e-06	360-512	345-395	+3							410	hypothetical protein MNEG_9350 [Monoraphidium neglectum]
gb\|ABF99352.1\|	94	54.7	6e-06	297-377	17-43	+3							219	hypothetical protein LOC_Os03g58280 [Oryza sativa Japonica Group]
ref\|XP_001780054.1\|	95	52.0	6e-06	309-470	1-54	+3							55	predicted protein [Physcomitrella patens] gb\|EDQ55157.1\| predicted protein, partial [Physcomitrella patens]
ref\|XP_004294362.1\|	98	51.2	1e-04	141-296	40-88	+3							200	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12-like isoform X1 [Fragaria vesca subsp. vesca]
ref\|XP_011396291.1\|	99	47.0	8e-04										98	hypothetical protein F751_1117 [Auxenochlorella protothecoides] gb\|KFM23421.1\| hypothetical protein F751_1117 [Auxenochl
ref\|XP_009419639.1\|	81	8	166				81	8	130				343	PREDICTED: uncharacterized protein LOC103999578 [Musa acuminata subsp. malaccensis]