name | 5'-sequence | 3'-sequence | length | description |
rank | score | Evalue | region1 | region2 | frame | rank | score | Evalue | region1 | region2 | frame |
emb|CAE05450.3| | | | | | | | 1 | 69.3 | 3e-11 | 295-642 | 302-423 | -3 | 1131 | OSJNBa0073E02.10 [Oryza sativa Japonica Group]
|
emb|CAH67225.1| | | | | | | | 2 | 68.9 | 4e-11 | 295-642 | 302-423 | -3 | 1087 | OSIGBa0145M07.7 [Oryza sativa Indica Group]
|
gb|AAU10682.1| | | | | | | | 4 | 68.9 | 6e-10 | 295-645 | 306-428 | -3 | 1210 | putative polyprotein [Oryza sativa Japonica Group]
|
emb|CAN81140.1| | | | | | | | 6 | 65.9 | 6e-09 | 295-618 | 80-193 | -3 | 791 | hypothetical protein VITISV_007978 [Vitis vinifera]
|
gb|ACY72569.1| | | | | | | | 8 | 63.9 | 3e-08 | 295-621 | 321-435 | -3 | 1436 | unknown [Oryza sativa Japonica Group]
|
gb|AAB82754.1| | | | | | | | 10 | 63.5 | 5e-08 | 283-621 | 320-438 | -3 | 1445 | retrofit [Oryza longistaminata]
|
gb|ACV42639.1| | | | | | | | 12 | 62.8 | 9e-08 | 295-621 | 324-438 | -3 | 1448 | gag/pol [Oryza sativa Japonica Group]
|
dbj|BAB90546.1| | | | | | | | 13 | 62.8 | 9e-08 | 295-621 | 324-438 | -3 | 1448 | putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa Japonica Group]
|
gb|ABG00000.1| | | | | | | | 15 | 62.0 | 1e-07 | 295-645 | 1272-1394 | -3 | 2074 | retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
|
gb|AAT85031.1| | | | | | | | 5 | 61.6 | 1e-09 | 295-621 | 318-432 | -3 | 1437 | putative polyprotein [Oryza sativa Japonica Group] gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass
|
emb|CCH50966.1| | | | | | | | 17 | 60.1 | 2e-07 | 262-702 | 566-713 | -3 | 1670 | T4.5 [Malus x robusta]
|
emb|CAN74695.1| | | | | | | | 3 | 58.9 | 3e-10 | 301-621 | 352-467 | -3 | 1424 | hypothetical protein VITISV_024648 [Vitis vinifera]
|
emb|CAN83409.1| | | | | | | | 24 | 58.9 | 1e-06 | 295-618 | 248-361 | -3 | 403 | hypothetical protein VITISV_034065 [Vitis vinifera]
|
emb|CDH30699.1| | | | | | | | 9 | 58.5 | 4e-08 | 295-630 | 363-480 | -3 | 646 | putative Ty1-copia-like retrotransposon [Cercis chinensis]
|
emb|CAN77680.1| | | | | | | | 19 | 58.5 | 3e-07 | 295-633 | 292-410 | -3 | 590 | hypothetical protein VITISV_040762 [Vitis vinifera]
|
emb|CAN78270.1| | | | | | | | 25 | 58.2 | 2e-06 | 295-657 | 168-294 | -3 | 334 | hypothetical protein VITISV_006712 [Vitis vinifera]
|
emb|CBI31290.3| | | | | | | | 26 | 58.2 | 2e-06 | 244-621 | 445-576 | -3 | 1201 | unnamed protein product [Vitis vinifera]
|
emb|CAN73349.1| | | | | | | | 27 | 57.8 | 3e-06 | 301-621 | 288-400 | -3 | 424 | hypothetical protein VITISV_009748 [Vitis vinifera]
|
emb|CDY58610.1| | | | | | | | 29 | 57.4 | 4e-06 | 259-693 | 96-233 | -3 | 856 | BnaCnng33390D [Brassica napus]
|
emb|CAN61322.1| | | | | | | | 30 | 57.4 | 5e-06 | 286-621 | 344-461 | -3 | 1432 | hypothetical protein VITISV_012106 [Vitis vinifera]
|
pir||T02087 | | | | | | | 31 | 57.4 | 5e-06 | 295-618 | 323-436 | -3 | 1439 | gag/pol polyprotein - maize retrotransposon Hopscotch gb|AAA57005.1| copia-like retrotransposon Hopscotch polyprotein [Z
|
gb|ABA95065.1| | | | | | | | 32 | 57.0 | 5e-06 | 295-621 | 305-419 | -3 | 825 | retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
|
gb|AAU43956.1| | | | | | | | 33 | 57.0 | 7e-06 | 295-621 | 318-432 | -3 | 1447 | unknown protein [Oryza sativa Japonica Group] gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group]
|
emb|CAN83798.1| | | | | | | | 23 | 56.6 | 1e-06 | 295-642 | 239-360 | -3 | 787 | hypothetical protein VITISV_039072 [Vitis vinifera]
|
emb|CAN64418.1| | | | | | | | 38 | 56.2 | 1e-05 | 295-618 | 189-302 | -3 | 1429 | hypothetical protein VITISV_030041 [Vitis vinifera]
|
emb|CAN66863.1| | | | | | | | 35 | 55.8 | 8e-06 | 301-621 | 155-267 | -3 | 1112 | hypothetical protein VITISV_013500 [Vitis vinifera]
|
ref|XP_008356829.1| | | | | | | | 21 | 55.5 | 7e-07 | 301-621 | 863-975 | -3 | 1390 | PREDICTED: cation/H(+) antiporter 15-like [Malus domestica]
|
emb|CAN63649.1| | | | | | | | 40 | 55.5 | 2e-05 | 295-639 | 293-413 | -3 | 1131 | hypothetical protein VITISV_037657 [Vitis vinifera]
|
emb|CAN75700.1| | | | | | | | 18 | 55.1 | 3e-07 | 274-621 | 391-508 | -3 | 1099 | hypothetical protein VITISV_035987 [Vitis vinifera]
|
gb|KDP42327.1| | | | | | | | 28 | 55.1 | 4e-06 | 295-624 | 46-161 | -3 | 162 | hypothetical protein JCGZ_02800 [Jatropha curcas]
|
gb|AAT07563.1| | | | | | | | 42 | 55.1 | 3e-05 | 295-621 | 312-426 | -3 | 1431 | putative polyprotein [Oryza sativa Japonica Group] gb|AAT07631.1| putative polyprotein [Oryza sativa Japonica Group]
|
gb|AAN04167.1| | | | | | | | 43 | 55.1 | 3e-05 | 295-645 | 208-332 | -3 | 1042 | Putative copia-like retrotransposon polyprotein [Oryza sativa Japonica Group] gb|AAP53032.1| retrotransposon protein, p
|
emb|CAN81099.1| | | | | | | | 45 | 55.1 | 3e-05 | 298-687 | 352-483 | -3 | 1455 | hypothetical protein VITISV_017741 [Vitis vinifera]
|
gb|AAD14478.1| | | | | | | | 46 | 55.1 | 3e-05 | 301-621 | 287-399 | -3 | 1194 | Strong similarity to gb|AF039376 Evelknievel retrotransposon polyprotein from Arabidopsis arenosa [Arabidopsis thaliana
|
gb|EEC80484.1| | | | | | | | 44 | 54.7 | 3e-05 | 295-621 | 309-423 | -3 | 506 | hypothetical protein OsI_22718 [Oryza sativa Indica Group]
|
emb|CAN66496.1| | | | | | | | 50 | 54.7 | 4e-05 | 301-696 | 175-311 | -3 | 1092 | hypothetical protein VITISV_036886 [Vitis vinifera]
|
emb|CAN59952.1| | | | | | | | 51 | 54.7 | 4e-05 | 289-621 | 341-457 | -3 | 1365 | hypothetical protein VITISV_006720 [Vitis vinifera]
|
gb|AAR88589.1| | | | | | | | 56 | 53.5 | 8e-05 | 295-621 | 287-401 | -3 | 1399 | putative copia-like retrotransposon protein [Oryza sativa Japonica Group]
|
gb|ABA95367.1| | | | | | | | 57 | 53.5 | 8e-05 | 301-621 | 289-402 | -3 | 807 | retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
|
gb|AAK55460.1|AC069300_15 | | | | | | | 58 | 53.5 | 8e-05 | 295-621 | 321-435 | -3 | 1031 | putative gag-pol polyprotein [Oryza sativa Japonica Group] gb|AAP54977.1| retrotransposon protein, putative, Ty1-copia s
|
emb|CAN69367.1| | | | | | | | 60 | 53.5 | 1e-04 | 286-621 | 239-356 | -3 | 1083 | hypothetical protein VITISV_035520 [Vitis vinifera]
|
gb|ABA97279.2| | | | | | | | 54 | 53.1 | 7e-05 | 295-642 | 156-277 | -3 | 297 | retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
|
gb|ABA97008.1| | | | | | | | 62 | 53.1 | 1e-04 | 295-654 | 308-435 | -3 | 1202 | retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
|
gb|AAK43485.1|AC084807_10 | | | | | | | 63 | 53.1 | 1e-04 | 301-618 | 337-448 | -3 | 1459 | polyprotein, putative [Arabidopsis thaliana] dbj|BAH30336.1| hypothetical protein [Arabidopsis thaliana]
|
emb|CAN79733.1| | | | | | | | 59 | 52.4 | 9e-05 | 301-633 | 73-189 | -3 | 807 | hypothetical protein VITISV_016615 [Vitis vinifera]
|
emb|CAN82452.1| | | | | | | | 69 | 52.4 | 2e-04 | 286-621 | 315-432 | -3 | 1139 | hypothetical protein VITISV_003326 [Vitis vinifera]
|
emb|CAN83506.1| | | | | | | | 34 | 52.0 | 7e-06 | 289-645 | 224-348 | -3 | 1172 | hypothetical protein VITISV_027576 [Vitis vinifera]
|
dbj|BAB10876.1| | | | | | | | 72 | 52.0 | 3e-04 | 301-618 | 314-425 | -3 | 1429 | polyprotein [Arabidopsis thaliana]
|
gb|ABF95616.1| | | | | | | | 74 | 52.0 | 3e-04 | 295-621 | 309-423 | -3 | 1241 | retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
|
emb|CAH67640.1| | | | | | | | 75 | 52.0 | 3e-04 | 301-621 | 450-562 | -3 | 1825 | H0102C09.1 [Oryza sativa Indica Group]
|
emb|CDP06210.1| | | | | | | | 73 | 51.6 | 3e-04 | 196-618 | 221-369 | -3 | 406 | unnamed protein product [Coffea canephora]
|
emb|CAN60100.1| | | | | | | | 78 | 51.2 | 3e-04 | 298-621 | 243-358 | -3 | 411 | hypothetical protein VITISV_021668 [Vitis vinifera]
|
emb|CAN63683.1| | | | | | | | 82 | 51.2 | 5e-04 | 301-621 | 345-457 | -3 | 1272 | hypothetical protein VITISV_030301 [Vitis vinifera]
|
gb|ACP30598.1| | | | | | | | 83 | 51.2 | 5e-04 | 295-633 | 326-444 | -3 | 2301 | disease resistance protein [Brassica rapa subsp. pekinensis]
|
emb|CAA19715.1| | | | | | | | 86 | 50.8 | 7e-04 | 295-627 | 174-290 | -3 | 1318 | putative protein [Arabidopsis thaliana] emb|CAB79576.1| putative protein [Arabidopsis thaliana]
|
ref|XP_008374275.1| | | | | | | | 88 | 50.8 | 7e-04 | 295-618 | 37-150 | -3 | 740 | PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Malus domestica]
|
ref|XP_008356072.1| | | | | | | | 90 | 50.8 | 7e-04 | 301-621 | 354-467 | -3 | 779 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103419758 [Malus domestica]
|
emb|CAN81355.1| | | | | | | | 92 | 50.4 | 9e-04 | 289-621 | 341-457 | -3 | 1402 | hypothetical protein VITISV_039158 [Vitis vinifera]
|
gb|AAF99727.1|AC004557_6 | | | | | | | 93 | 50.4 | 0.001 | | | | 1534 | F17L21.7 [Arabidopsis thaliana]
|
gb|AAC67200.1| | | | | | | | 11 | 49.3 | 6e-08 | 295-627 | 329-445 | -3 | 1402 | putative retroelement pol polyprotein [Arabidopsis thaliana]
|
gb|ABA98049.1| | | | | | | | 36 | 48.5 | 8e-06 | 295-621 | 319-434 | -3 | 1460 | retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
|
emb|CAN61376.1| | | | | | | | 61 | 48.5 | 1e-04 | 292-630 | 9-127 | -3 | 675 | hypothetical protein VITISV_011846 [Vitis vinifera]
|
emb|CAN74166.1| | | | | | | | 53 | 47.0 | 5e-05 | 304-621 | 13-124 | -3 | 631 | hypothetical protein VITISV_007721 [Vitis vinifera]
|
emb|CAN76151.1| | | | | | | | 87 | 43.1 | 7e-04 | 295-630 | 154-227 | -3 | 979 | hypothetical protein VITISV_012673 [Vitis vinifera]
|
ref|XP_008360435.1| | | | | | | | 65 | 9 | 52.4 | | | | 513 | PREDICTED: uncharacterized protein LOC103424139 [Malus domestica]
|
ref|XP_009597451.1| | | | | | | | 16 | 8 | 60.8 | | | | 313 | PREDICTED: uncharacterized protein LOC104093418 [Nicotiana tomentosiformis] ref|XP_009605373.1| PREDICTED: uncharacteriz
|
ref|XP_004971816.1| | | | | | | | 20 | 8 | 60.8 | | | | 1281 | PREDICTED: uncharacterized protein LOC101779238, partial [Setaria italica]
|
ref|XP_010645247.1| | | | | | | | 66 | 8 | 52.4 | | | | 414 | PREDICTED: uncharacterized protein LOC104877828 [Vitis vinifera]
|
ref|XP_010263949.1| | | | | | | | 89 | 8 | 50.1 | | | | 320 | PREDICTED: uncharacterized protein LOC104602078 [Nelumbo nucifera]
|
ref|XP_009597228.1| | | | | | | | 22 | 7 | 58.9 | | | | 313 | PREDICTED: uncharacterized protein LOC104093207 [Nicotiana tomentosiformis] ref|XP_009605337.1| PREDICTED: uncharacteriz
|
ref|XP_008366645.1| | | | | | | | 39 | 7 | 55.5 | | | | 603 | PREDICTED: uncharacterized protein LOC103430287 [Malus domestica]
|
ref|XP_010243147.1| | | | | | | | 47 | 7 | 54.3 | | | | 297 | PREDICTED: uncharacterized protein LOC104587297 [Nelumbo nucifera]
|
ref|XP_008362575.1| | | | | | | | 55 | 7 | 53.9 | | | | 759 | PREDICTED: uncharacterized protein LOC103426257 [Malus domestica]
|
ref|XP_009785398.1| | | | | | | | 77 | 7 | 50.8 | | | | 238 | PREDICTED: uncharacterized protein LOC104233667 [Nicotiana sylvestris]
|
ref|XP_010655804.1| | | | | | | | 84 | 6 | 51.2 | | | | 1045 | PREDICTED: uncharacterized protein LOC104880556 [Vitis vinifera]
|
ref|XP_010264130.1| | | | | | | | 41 | 5 | 54.7 | | | | 347 | PREDICTED: uncharacterized protein LOC104602215 [Nelumbo nucifera]
|
ref|XP_010242057.1| | | | | | | | 48 | 5 | 54.3 | | | | 344 | PREDICTED: uncharacterized protein LOC104586495 [Nelumbo nucifera]
|
ref|XP_010252418.1| | | | | | | | 7 | 3 | 63.5 | | | | 440 | PREDICTED: uncharacterized protein LOC104593993 [Nelumbo nucifera]
|
ref|XP_009373187.1| | | | | | | | 71 | 3 | 52.0 | | | | 878 | PREDICTED: uncharacterized protein LOC103962233 [Pyrus x bretschneideri]
|
ref|XP_008390959.1| | | | | | | | 80 | 3 | 51.6 | | | | 656 | PREDICTED: uncharacterized protein LOC103453183 [Malus domestica]
|
ref|XP_010431048.1| | | | | | | | 37 | 2 | 55.5 | | | | 266 | PREDICTED: uncharacterized protein LOC104715332 [Camelina sativa]
|
ref|XP_010248464.1| | | | | | | | 49 | 2 | 53.9 | | | | 266 | PREDICTED: uncharacterized protein LOC104591372 [Nelumbo nucifera]
|
ref|XP_009786936.1| | | | | | | | 52 | 2 | 53.9 | | | | 291 | PREDICTED: uncharacterized protein LOC104234972 [Nicotiana sylvestris]
|
ref|XP_009620599.1| | | | | | | | 70 | 2 | 49.7 | | | | 142 | PREDICTED: uncharacterized protein LOC104112402 [Nicotiana tomentosiformis]
|
ref|XP_008355539.1| | | | | | | | 81 | 2 | 51.2 | | | | 637 | PREDICTED: uncharacterized protein LOC103419202 [Malus domestica]
|
ref|XP_008390627.1| | | | | | | | 64 | 1 | 44.3 | | | | 1159 | PREDICTED: uncharacterized protein LOC103452871 [Malus domestica]
|
ref|XP_004967136.1| | | | | | | | 68 | 1 | 52.4 | | | | 866 | PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
|
ref|XP_010265572.1| | | | | | | | 79 | 1 | 50.8 | | | | 257 | PREDICTED: uncharacterized protein LOC104603271 [Nelumbo nucifera]
|
ref|XP_008374297.1| | | | | | | | 91 | 1 | 50.4 | | | | 1210 | PREDICTED: uncharacterized protein LOC103437591 [Malus domestica]
|
ref|XP_009145096.1| | | | | | | | 14 | 0 | 61.6 | | | | 2690 | PREDICTED: uncharacterized protein LOC103868780 [Brassica rapa]
|
ref|XP_009344802.1| | | | | | | | 67 | 0 | 52.4 | | | | 613 | PREDICTED: uncharacterized protein LOC103936680 [Pyrus x bretschneideri]
|
ref|XP_008387175.1| | | | | | | | 76 | 0 | 51.6 | | | | 647 | PREDICTED: uncharacterized protein LOC103449620 [Malus domestica]
|
ref|XP_011016404.1| | | | | | | | 85 | 0 | 50.8 | | | | 987 | PREDICTED: uncharacterized protein LOC105119910 [Populus euphratica]
|