Clone JMSF015F14 [sequences]

contigF:000680 contigR:000680

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
ref\|XP_009785778.1\|	1	279	6e-91	52-492	1-147	+1	1	335	2e-111	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylvestris]
ref\|XP_009605052.1\|	2	279	1e-90	52-492	1-147	+1	8	330	1e-109	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana tomentosiformis]
ref\|XP_004238992.1\|	3	274	6e-89	52-492	1-147	+1	9	330	1e-109	167-733	131-319	-2	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum lycopersicum]
ref\|XP_006348609.1\|	4	273	1e-88	52-492	1-147	+1	10	330	2e-109	167-733	131-319	-2	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum tuberosum]
ref\|XP_011092547.1\|	5	271	8e-88	52-495	1-148	+1	7	331	7e-110	167-733	131-319	-2	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Sesamum indicum]
ref\|XP_007042502.1\|	7	264	5e-85	52-495	1-147	+1	3	333	1e-110	167-733	131-318	-2	318	DNA-directed RNA polymerase family protein [Theobroma cacao] gb\|EOX98333.1\| DNA-directed RNA polymerase family protein [
gb\|KJB77656.1\|	12	261	9e-84	52-495	1-147	+1	6	331	7e-110	167-733	131-318	-2	318	hypothetical protein B456_012G149200 [Gossypium raimondii]
ref\|XP_002518700.1\|	6	267	5e-86	52-495	1-147	+1	14	325	2e-107	167-733	131-318	-2	318	DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gb\|EEF43625.1\| DNA-directed RNA polymerase II subuni
emb\|CAN60923.1\|	8	264	6e-85	52-495	1-147	+1	12	327	2e-108	167-733	131-318	-2	318	hypothetical protein VITISV_019338 [Vitis vinifera]
gb\|KHG20623.1\|	19	259	7e-83	52-495	1-147	+1	4	332	5e-110	167-733	131-318	-2	318	DNA-directed RNA polymerase II subunit RPB3-A -like protein [Gossypium arboreum]
ref\|XP_002285322.1\|	9	263	2e-84	52-495	1-147	+1	11	327	2e-108	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis vinifera] ref\|XP_010647901.1\| PREDICTED: DNA-dire
gb\|KHG04309.1\|	16	260	3e-83	52-495	1-147	+1	13	326	8e-108	167-733	131-318	-2	318	DNA-directed RNA polymerase II subunit RPB3-A -like protein [Gossypium arboreum] gb\|KJB47376.1\| hypothetical protein B4
ref\|XP_004505300.1\|	13	261	1e-83	52-477	1-143	+1	19	320	2e-105	167-733	131-319	-2	319	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer arietinum]
ref\|XP_007157771.1\|	25	258	2e-82	52-477	1-142	+1	16	323	1e-106	167-733	131-318	-2	318	hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris] gb\|ESW29765.1\| hypothetical protein PHAVU_002G097400g [Phase
ref\|XP_009350515.1\|	18	259	5e-83	52-495	1-147	+1	18	321	7e-106	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Pyrus x bretschneideri]
ref\|XP_006422955.1\|	21	258	9e-83	52-474	1-141	+1	20	318	1e-104	167-733	131-319	-2	319	hypothetical protein CICLE_v10028849mg [Citrus clementina] ref\|XP_006487022.1\| PREDICTED: DNA-directed RNA polymerases I
ref\|XP_009335010.1\|	23	258	1e-82	52-495	1-147	+1	21	318	1e-104	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Pyrus x bretschneideri]
emb\|CDO97209.1\|	27	257	3e-82	52-495	1-148	+1	22	317	2e-104	167-733	131-319	-2	319	unnamed protein product [Coffea canephora]
ref\|XP_003556247.1\|	35	251	7e-80	58-477	4-143	+1	15	323	8e-107	167-733	132-320	-2	320	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Glycine max] gb\|KHN08054.1\| DNA-directed RNA polym
ref\|XP_008373098.1\|	20	259	8e-83	52-495	1-147	+1	26	314	2e-103	167-733	131-318	-2	318	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Malus domestica]
gb\|KDP47129.1\|	26	257	3e-82	52-495	1-146	+1	23	316	7e-104	167-733	131-317	-2	317	hypothetical protein JCGZ_22125 [Jatropha curcas]
ref\|XP_008236569.1\|	24	258	2e-82	52-495	1-147	+1	27	314	3e-103	167-733	131-318	-2	318	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Prunus mume]
ref\|XP_003529425.1\|	34	251	6e-80	58-477	4-143	+1	17	321	6e-106	167-733	132-319	-2	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Glycine max] gb\|KHN42991.1\| DNA-directed RNA polymerase
ref\|XP_004138895.1\|	11	261	8e-84	52-492	1-147	+1	36	310	2e-101	167-733	131-320	-2	320	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cucumis sativus] gb\|KGN61343.1\| hypothetical protein Csa
ref\|XP_002313865.2\|	15	260	2e-83	52-474	1-141	+1	33	311	5e-102	167-730	132-323	-2	323	DNA-directed RNA polymerase II 36 kDa polypeptide B family protein [Populus trichocarpa] gb\|EEE87820.2\| DNA-directed RN
ref\|XP_004304034.1\|	28	256	6e-82	52-495	1-147	+1	24	315	1e-103	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Fragaria vesca subsp. vesca]
ref\|XP_007201816.1\|	22	258	1e-82	52-495	1-147	+1	30	312	2e-102	167-733	131-318	-2	318	hypothetical protein PRUPE_ppa008812mg [Prunus persica] gb\|EMJ03015.1\| hypothetical protein PRUPE_ppa008812mg [Prunus pe
ref\|XP_011000984.1\|	17	259	5e-83	52-474	1-141	+1	37	310	2e-101	167-730	132-323	-2	323	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Populus euphratica] ref\|XP_011000991.1\| PREDICTED:
ref\|XP_008441761.1\|	14	261	1e-83	52-492	1-147	+1	40	308	5e-101	167-733	131-320	-2	320	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo]
ref\|XP_010065975.1\|	31	253	2e-80	58-468	6-142	+1	25	315	1e-103	167-733	134-321	-2	321	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Eucalyptus grandis] gb\|KCW63722.1\| hypothetical pr
ref\|XP_008367672.1\|	10	261	7e-84	52-495	1-147	+1	48	303	4e-99	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Malus domestica]
gb\|AIA09926.1\|	30	253	1e-80	58-474	4-142	+1	39	309	4e-101	167-733	132-317	-2	317	RNA polymerase II [Quercus suber]
ref\|XP_003607895.1\|	32	252	3e-80	52-459	1-136	+1	42	307	2e-100	167-733	131-318	-2	318	DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] gb\|ABC75365.1\| RNA polymerase, dimerisation [Medicag
ref\|XP_010526970.1\|	37	246	4e-78	52-495	1-147	+1	38	309	4e-101	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Tarenaya hassleriana]
gb\|AFK41039.1\|	36	248	1e-78	52-459	1-136	+1	41	307	2e-100	167-733	131-318	-2	318	unknown [Medicago truncatula]
ref\|XP_010518168.1\|	45	242	3e-76	52-495	1-148	+1	29	312	2e-102	167-733	131-319	-2	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Camelina sativa]
ref\|XP_010691712.1\|	29	255	2e-81	52-468	1-139	+1	54	299	3e-97	167-733	131-318	-2	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Beta vulgaris subsp. vulgaris] ref\|XP_010691713.1\| PRED
ref\|XP_006409557.1\|	51	243	7e-76	7-495	36-198	+1	35	311	2e-101	167-733	181-369	-2	369	hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum] gb\|ESQ51010.1\| hypothetical protein EUTSA_v10022739mg [Eutr
ref\|XP_002883895.1\|	49	241	5e-76	52-495	1-148	+1	31	312	2e-102	167-733	131-319	-2	319	RBP36A [Arabidopsis lyrata subsp. lyrata] gb\|EFH60154.1\| RBP36A [Arabidopsis lyrata subsp. lyrata]
ref\|XP_010467299.1\|	53	240	2e-75	52-495	1-148	+1	28	313	1e-102	167-733	131-319	-2	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Camelina sativa]
ref\|XP_010488959.1\|	52	241	9e-76	52-495	1-148	+1	32	311	3e-102	167-733	131-319	-2	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Camelina sativa]
ref\|XP_006298158.1\|	48	241	5e-76	52-495	1-148	+1	34	310	2e-101	167-733	131-319	-2	319	hypothetical protein CARUB_v10014208mg [Capsella rubella] gb\|EOA31056.1\| hypothetical protein CARUB_v10014208mg [Capsell
gb\|KFK40018.1\|	44	244	5e-77	58-495	4-149	+1	46	305	1e-99	167-733	132-320	-2	320	hypothetical protein AALP_AA3G319300 [Arabis alpina]
ref\|XP_009119413.1\|	39	245	2e-77	58-495	4-148	+1	50	303	9e-99	167-733	132-319	-2	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Brassica rapa] emb\|CDY36631.1\| BnaA07g04260D [Brassica
ref\|NP_179145.1\|	47	241	4e-76	52-495	1-148	+1	45	305	1e-99	167-733	131-319	-2	319	DNA-directed RNA polymerase II subunit RPB3-A [Arabidopsis thaliana] sp\|Q39211.1\|NRPB3_ARATH RecName: Full=DNA-directed
ref\|XP_010275045.1\|	46	242	3e-76	52-495	1-150	+1	49	303	7e-99	167-733	131-321	-2	321	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Nelumbo nucifera]
ref\|XP_006393120.1\|	57	238	2e-74	58-477	4-144	+1	43	307	3e-100	167-733	132-320	-2	320	hypothetical protein EUTSA_v10011661mg [Eutrema salsugineum] gb\|ESQ30406.1\| hypothetical protein EUTSA_v10011661mg [Eutr
ref\|XP_010241296.1\|	54	239	3e-75	52-495	1-150	+1	47	305	1e-99	167-733	131-321	-2	321	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Nelumbo nucifera]
gb\|AAM65319.1\|	55	238	9e-75	52-495	1-148	+1	44	305	1e-99	167-733	131-319	-2	319	DNA-directed RNA polymerase II, third largest subunit [Arabidopsis thaliana]
emb\|CDY62312.1\|	41	245	2e-77	58-486	4-146	+1	55	297	1e-96	167-733	132-318	-2	318	BnaCnng39910D [Brassica napus]
ref\|XP_009123235.1\|	43	244	3e-77	58-492	4-148	+1	56	297	2e-96	167-733	132-321	-2	321	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Brassica rapa]
emb\|CDY37227.1\|	42	245	2e-77	58-492	4-148	+1	58	295	1e-95	167-733	132-321	-2	321	BnaA09g08480D [Brassica napus]
ref\|XP_006853170.1\|	56	238	1e-74	52-495	1-151	+1	51	301	7e-98	167-730	132-322	-2	324	hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda] gb\|ERN14637.1\| hypothetical protein AMTR_s00038p0019405
ref\|XP_002883894.1\|	58	229	2e-71	52-495	1-148	+1	53	300	2e-97	167-733	131-319	-2	319	RBP36A [Arabidopsis lyrata subsp. lyrata] gb\|EFH60153.1\| RBP36A [Arabidopsis lyrata subsp. lyrata]
ref\|XP_001765827.1\|	62	223	1e-68	52-495	1-148	+1	52	300	1e-97	167-733	131-322	-2	324	predicted protein [Physcomitrella patens] gb\|EDQ69418.1\| predicted protein [Physcomitrella patens]
gb\|EPS71627.1\|	59	228	6e-71	52-477	1-143	+1	60	290	7e-94	170-733	132-320	-2	320	hypothetical protein M569_03132 [Genlisea aurea]
ref\|XP_010943195.1\|	60	224	3e-69	55-477	3-150	+1	64	276	4e-88	167-733	132-322	-2	323	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Elaeis guineensis]
ref\|NP_179142.1\|	76	209	1e-63	52-462	1-137	+1	59	291	2e-94	167-733	131-319	-2	319	DNA-directed RNA polymerase II subunit RPB3-B [Arabidopsis thaliana] sp\|Q39212.2\|RPD3B_ARATH RecName: Full=DNA-directed
ref\|XP_009418294.1\|	61	223	8e-69	64-465	15-148	+1	66	273	7e-87	176-730	142-327	-2	330	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Musa acuminata subsp. malaccensis]
gb\|AAB03740.1\|	74	210	1e-63	52-462	1-137	+1	61	286	4e-92	167-733	131-319	-2	319	RNA polymerase II third largest subunit [Arabidopsis thaliana]
ref\|XP_002983424.1\|	64	216	3e-66	61-459	3-135	+1	62	278	7e-89	167-730	131-319	-2	320	hypothetical protein SELMODRAFT_180179 [Selaginella moellendorffii] gb\|EFJ15766.1\| hypothetical protein SELMODRAFT_18017
ref\|XP_002960614.1\|	63	216	3e-66	61-459	3-135	+1	65	275	4e-88	167-730	131-319	-2	320	hypothetical protein SELMODRAFT_75337 [Selaginella moellendorffii] gb\|EFJ38153.1\| hypothetical protein SELMODRAFT_75337
gb\|ADE77570.1\|	73	212	2e-64	61-495	9-156	+1	63	276	3e-88	167-730	140-327	-2	330	unknown [Picea sitchensis]
ref\|NP_001062572.1\|	67	215	1e-65	58-465	7-143	+1	67	270	6e-86	167-730	137-330	-2	330	Os09g0110400 [Oryza sativa Japonica Group] dbj\|BAD17541.1\| putative DNA-directed RNA polymerase II [Oryza sativa Japonic
ref\|XP_006660419.1\|	65	216	6e-66	58-495	7-154	+1	69	265	5e-84	167-730	137-330	-2	330	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Oryza brachyantha]
ref\|XP_003576823.1\|	77	209	4e-63	58-465	7-143	+1	72	255	4e-80	176-730	137-327	-2	330	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Brachypodium distachyon]
ref\|XP_002462055.1\|	71	213	5e-65	58-465	6-142	+1	73	249	1e-77	170-730	136-327	-2	328	hypothetical protein SORBIDRAFT_02g014460 [Sorghum bicolor] gb\|EER98576.1\| hypothetical protein SORBIDRAFT_02g014460 [So
ref\|NP_001149261.1\|	69	214	3e-65	58-465	6-142	+1	75	247	7e-77	170-730	136-327	-2	328	LOC100282883 [Zea mays] gb\|ACG34756.1\| DNA-directed RNA polymerase II 36 kDa polypeptide A [Zea mays] gb\|ACN31311.1\| unk
ref\|XP_004956290.1\|	70	213	5e-65	58-465	7-143	+1	76	246	2e-76	170-730	137-324	-2	325	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Setaria italica]
gb\|EYU42691.1\|	235	123	4e-31	295-495	1-67	+1	2	330	1e-110	167-733	50-238	-2	238	hypothetical protein MIMGU_mgv1a012844mg [Erythranthe guttata]
emb\|CDX71219.1\|	38	244	1e-77	58-495	4-148	+1	78	207	7e-62	323-733	132-267	-2	282	BnaC07g04980D [Brassica napus]
emb\|CDX71220.1\|	50	245	7e-76	58-495	4-148	+1	79	206	8e-60	323-733	132-267	-2	444	BnaC07g04990D [Brassica napus]
gb\|EMS46394.1\|	79	189	7e-56	58-474	7-135	+1	74	248	2e-77	230-730	126-298	-2	315	DNA-directed RNA polymerase II subunit RPB3-A [Triticum urartu]
ref\|XP_007200659.1\|	78	205	3e-62	52-495	1-136	+1	77	231	5e-71	167-733	120-290	-2	290	hypothetical protein PRUPE_ppa016873mg [Prunus persica] gb\|EMJ01858.1\| hypothetical protein PRUPE_ppa016873mg [Prunus pe
ref\|XP_010107867.1\|	33	259	4e-80	52-477	1-142	+1	87	162	1e-42	422-733	131-233	-2	588	DNA-directed RNA polymerase II subunit [Morus notabilis] gb\|EXC17267.1\| DNA-directed RNA polymerase II subunit [Morus no
tpg\|DAA39561.1\|	66	213	9e-66	58-459	6-140	+1	95	144	6e-38	440-730	136-242	-2	260	TPA: hypothetical protein ZEAMMB73_135001 [Zea mays]
ref\|NP_001077894.1\|	72	209	2e-64	52-462	1-137	+1	93	146	6e-39	434-733	131-230	-2	235	DNA-directed RNA polymerase II subunit RPB3-B [Arabidopsis thaliana] gb\|AEC06398.1\| DNA-directed RNA polymerase II subun
gb\|EMS66673.1\|	75	209	1e-63	58-459	7-142	+1	110	121	5e-29	167-445	217-305	-2	305	DNA-directed RNA polymerase II subunit RPB3-A [Triticum urartu]
emb\|CBI40277.3\|							5	327	5e-110	167-733	19-206	-2	206	unnamed protein product [Vitis vinifera]
ref\|XP_001767451.1\|	80	155	3e-42	58-459	17-152	+1	88	154	2e-40	221-730	148-330	-2	385	predicted protein [Physcomitrella patens] gb\|EDQ67775.1\| predicted protein [Physcomitrella patens]
ref\|XP_002504237.1\|	161	131	2e-33	55-492	5-151	+1	82	174	2e-48	206-733	135-324	-2	331	dna-directed RNA polymerase II polypeptide a [Micromonas sp. RCC299] gb\|ACO65495.1\| dna-directed RNA polymerase II poly
ref\|XP_005643055.1\|	139	132	7e-34	70-462	8-135	+1	84	164	4e-45	245-730	130-288	-2	303	DNA-directed RNA polymerase II, 36 kDa polypeptide [Coccomyxa subellipsoidea C-169] gb\|EIE18511.1\| DNA-directed RNA pol
ref\|XP_011397782.1\|	234	125	4e-31	79-477	12-142	+1	83	171	1e-47	245-730	132-291	-2	313	DNA-directed RNA polymerases II, IV and V subunit 3 [Auxenochlorella protothecoides] gb\|KFM24894.1\| DNA-directed RNA po
gb\|AFK49173.1\|							57	294	2e-96	167-733	50-237	-2	237	unknown [Lotus japonicus]
ref\|XP_629750.1\|	114	133	2e-34	73-495	10-144	+1	91	149	2e-39	245-730	131-290	-2	302	RNA polymerase II core subunit [Dictyostelium discoideum AX4] sp\|Q54DH7.1\|RPB3_DICDI RecName: Full=DNA-directed RNA poly
ref\|XP_004355278.1\|	85	140	6e-37	73-492	7-140	+1	97	139	2e-35	245-733	126-285	-2	296	RNA polymerase II core subunit [Dictyostelium fasciculatum] gb\|EGG16804.1\| RNA polymerase II core subunit [Dictyostelium
ref\|XP_003290595.1\|	155	131	1e-33	73-456	10-137	+1	96	143	3e-37	215-706	136-303	-2	303	RNA polymerase II core subunit [Dictyostelium purpureum] gb\|EGC32876.1\| RNA polymerase II core subunit [Dictyostelium pu
gb\|EFA85790.1\|	93	135	4e-35	73-468	7-134	+1	98	138	2e-35	215-730	127-294	-2	295	RNA polymerase II core subunit [Polysphondylium pallidum PN500]
gb\|EMT28290.1\|							68	265	1e-85	167-676	27-192	-2	192	DNA-directed RNA polymerase II subunit RPB3-A [Aegilops tauschii]
dbj\|BAN19962.1\|							70	263	7e-84	170-730	66-256	-2	257	RNA polymerase II, partial [Echinochloa phyllopogon]
ref\|XP_008907224.1\|	195	129	1e-32	67-465	3-136	+1	102	134	2e-33	200-724	132-309	-2	319	hypothetical protein PPTG_13362 [Phytophthora parasitica INRA-310] gb\|ETI44008.1\| hypothetical protein F443_11228 [Phyto
emb\|CCA16494.1\|	215	125	2e-31	73-495	5-145	+1	99	138	6e-35	200-724	132-309	-2	319	DNAdirected RNA polymerase II 36 kDa polypeptide A putative [Albugo laibachii Nc14]
emb\|CCI41220.1\|	236	125	4e-31	73-495	5-145	+1	101	136	3e-34	200-724	132-309	-2	319	unnamed protein product [Albugo candida]
ref\|XP_008869633.1\|	189	130	6e-33	70-465	4-136	+1	104	128	2e-31	233-724	132-298	-2	321	hypothetical protein H310_06366 [Aphanomyces invadans] gb\|ETW01785.1\| hypothetical protein H310_06366 [Aphanomyces invad
ref\|XP_009839409.1\|	196	129	1e-32	73-465	5-136	+1	103	128	2e-31	233-724	132-298	-2	321	hypothetical protein H257_13554 [Aphanomyces astaci] gb\|ETV71163.1\| hypothetical protein H257_13554 [Aphanomyces astaci]
gb\|EMT18475.1\|							71	256	2e-81	167-694	84-255	-2	255	DNA-directed RNA polymerase II subunit RPB3-A [Aegilops tauschii]
gb\|KDO29260.1\|	205	127	4e-32	67-465	3-136	+1	106	127	4e-31	233-730	130-298	-2	321	RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein [Saprolegnia parasitica CBS 223.65]
ref\|XP_008612909.1\|	231	125	3e-31	67-465	3-136	+1	105	127	4e-31	233-730	130-298	-2	321	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Saprolegnia diclina VS20] gb\|EQC33686.1\| RNA polymera
dbj\|GAM20367.1\|	81	144	2e-39	49-456	1-131	+1	147	94.4	2e-19	449-673	143-217	-2	227	hypothetical protein SAMD00019534_035420, partial [Acytostelium subglobosum LB1]
ref\|XP_009514985.1\|	113	132	2e-34	67-465	3-136	+1	148	94.4	2e-19	434-724	132-227	-2	242	hypothetical protein PHYSODRAFT_554134 [Phytophthora sojae] gb\|EGZ27710.1\| hypothetical protein PHYSODRAFT_554134 [Phyto
ref\|XP_002158521.1\|	89	137	5e-36	67-495	3-145	+1	187	88.2	3e-17	233-730	127-259	-2	273	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Hydra vulgaris]
ref\|XP_002997739.1\|	171	129	3e-33	67-465	3-136	+1	150	94.0	2e-19	434-724	132-227	-2	241	DNA-directed RNA polymerase II 36 kDa polypeptide A [Phytophthora infestans T30-4] gb\|EEY68040.1\| DNA-directed RNA poly
ref\|XP_008907225.1\|	159	129	2e-33	67-465	3-136	+1	156	92.4	7e-19	434-724	132-227	-2	240	hypothetical protein, variant [Phytophthora parasitica INRA-310] gb\|ETI44009.1\| hypothetical protein, variant [Phytophth
ref\|XP_002668960.1\|	180	130	4e-33	82-474	12-138	+1	211	87.0	1e-16	233-685	143-314	-2	324	predicted protein [Naegleria gruberi] gb\|EFC36216.1\| predicted protein [Naegleria gruberi]
gb\|EPZ35785.1\|	191	129	8e-33	79-480	8-147	+1	202	87.4	6e-17	194-676	146-277	-2	282	DNA-directed RNA polymerase, insert domain-containing protein [Rozella allomycis CSF55]
ref\|XP_007199459.1\|	68	211	3e-65	55-459	7-131	+1							253	hypothetical protein PRUPE_ppa026986mg [Prunus persica] gb\|EMJ00658.1\| hypothetical protein PRUPE_ppa026986mg [Prunus pe
ref\|XP_008236581.1\|							80	194	6e-58	167-664	48-204	-2	204	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Prunus mume]
ref\|XP_003060124.1\|							81	178	4e-50	212-673	168-324	-2	333	predicted protein [Micromonas pusilla CCMP1545] gb\|EEH56076.1\| predicted protein [Micromonas pusilla CCMP1545]
gb\|KIY95324.1\|							85	163	7e-44	212-676	142-300	-2	383	DNA-directed RNA polymerase II subunit RPB3-A [Monoraphidium neglectum]
ref\|XP_005848659.1\|							86	159	3e-43	206-697	108-273	-2	283	hypothetical protein CHLNCDRAFT_144215 [Chlorella variabilis] gb\|EFN56557.1\| hypothetical protein CHLNCDRAFT_144215 [Chl
ref\|XP_007509325.1\|							90	150	8e-40	212-727	124-295	-2	298	DNA-directed RNA polymerase II subunit RPB3 [Bathycoccus prasinos] emb\|CCO19782.1\| DNA-directed RNA polymerase II subuni
ref\|XP_001416207.1\|							92	148	6e-39	227-730	127-309	-2	318	DNA-directed RNA polymerase II subunit 3 [Ostreococcus lucimarinus CCE9901] gb\|ABO94500.1\| DNA-directed RNA polymerase
ref\|XP_003074839.1\|							94	148	6e-39	203-673	144-300	-2	301	Rpb3 DNA-directed RNA polymerase II subunit 3 (IC) [Ostreococcus tauri] emb\|CAL52099.2\| DNA-directed RNA polymerase, 30
gb\|KDD74543.1\|							89	147	4e-40	236-655	1-140	-2	156	hypothetical protein H632_c1241p1 [Helicosporidium sp. ATCC 50920]
gb\|ACO12911.1\|	83	141	1e-37	67-456	3-130	+1							279	DNA-directed RNA polymerase II subunit RPB3 [Lepeophtheirus salmonis]
ref\|XP_002741050.1\|	84	140	3e-37	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Saccoglossus kowalevskii]
gb\|EIE89120.1\|	82	139	7e-38	58-480	4-142	+1							201	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus delemar RA 99-880]
emb\|CEG69748.1\|	86	138	1e-36	58-456	4-134	+1							280	Putative RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus microsporus]
ref\|XP_011418634.1\|	88	137	4e-36	67-456	3-130	+1							273	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Crassostrea gigas]
ref\|XP_005102061.1\|	90	136	8e-36	67-456	3-130	+1							280	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Aplysia californica]
ref\|XP_002415909.1\|	91	136	1e-35	67-495	3-145	+1							274	RNA polymerase II, subunit POLR2C/RPB3, putative [Ixodes scapularis] gb\|EEC19576.1\| RNA polymerase II, subunit POLR2C/RP
ref\|XP_002594919.1\|	92	135	2e-35	67-495	3-146	+1							275	hypothetical protein BRAFLDRAFT_277672 [Branchiostoma floridae] gb\|EEN50930.1\| hypothetical protein BRAFLDRAFT_277672 [B
ref\|XP_002948375.1\|							100	135	2e-34	281-730	108-250	-2	272	hypothetical protein VOLCADRAFT_88650 [Volvox carteri f. nagariensis] gb\|EFJ50782.1\| hypothetical protein VOLCADRAFT_886
ref\|XP_006641241.1\|	94	134	4e-35	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Lepisosteus oculatus]
ref\|NP_001280231.1\|	95	134	5e-35	67-456	3-130	+1							275	DNA-directed RNA polymerase II subunit RPB3 [Gallus gallus]
ref\|NP_001232142.1\|	97	134	5e-35	67-456	3-130	+1							275	putative DNA directed RNA polymerase II polypeptide C [Taeniopygia guttata] ref\|XP_005052452.1\| PREDICTED: DNA-directed
ref\|XP_006035547.1\|	98	134	5e-35	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Alligator sinensis]
ref\|XP_005152356.1\|	99	134	5e-35	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Melopsittacus undulatus]
ref\|XP_006261724.1\|	100	134	5e-35	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Alligator mississippiensis]
ref\|XP_005796323.1\|	101	134	5e-35	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Xiphophorus maculatus] ref\|XP_007558553.1\| PREDICTED: DNA-
ref\|XP_004690587.1\|	102	134	8e-35	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Condylura cristata]
ref\|XP_002119306.2\|	105	134	1e-34	40-495	36-188	+1							319	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like isoform X1 [Ciona intestinalis] ref\|XP_009857626.1\| PREDICT
gb\|ELW66196.1\|	181	134	4e-33	67-456	435-562	+1							707	DNA-directed RNA polymerase II subunit RPB3 [Tupaia chinensis]
ref\|XP_004213207.1\|	87	133	4e-36	67-456	3-130	+1							131	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like, partial [Hydra vulgaris]
ref\|XP_003439459.1\|	103	133	9e-35	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Oreochromis niloticus] ref\|XP_004566178.1\| PREDICTED: DNA-
gb\|KFM80578.1\|	104	133	1e-34	67-456	3-130	+1							274	DNA-directed RNA polymerase II subunit RPB3, partial [Stegodyphus mimosarum]
ref\|NP_001161428.1\|	106	133	1e-34	67-456	3-130	+1							275	DNA-directed RNA polymerase II subunit RPB3 [Danio rerio] gb\|AAH46047.1\| Polymerase (RNA) II (DNA directed) polypeptide
ref\|XP_003228630.1\|	107	133	2e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Anolis carolinensis]
ref\|XP_006809168.1\|	96	132	5e-35	67-456	3-130	+1							185	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Neolamprologus brichardi]
ref\|XP_008295027.1\|	108	132	2e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Stegastes partitus]
gb\|EHJ78455.1\|	110	132	2e-34	67-456	3-130	+1							275	DNA-directed RNA polymerase II polypeptide [Danaus plexippus]
ref\|XP_003792622.1\|	111	132	2e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Otolemur garnettii]
ref\|XP_011190744.1\|	112	132	2e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Bactrocera cucurbitae] ref\|XP_011197774.1\| PREDICTED: DNA-direc
ref\|XP_004521442.1\|	115	132	2e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Ceratitis capitata]
ref\|XP_004069860.1\|	117	132	3e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Oryzias latipes]
gb\|EPB91568.1\|	119	132	3e-34	58-456	4-134	+1							280	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Mucor circinelloides f. circinelloides 1006PhL]
ref\|XP_004264975.1\|	121	132	4e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Orcinus orca] ref\|XP_004313267.1\| PREDICTED: DNA-directed RNA p
ref\|XP_003355849.1\|	122	132	4e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Sus scrofa] ref\|XP_004670779.1\| PREDICTED: DNA-directed RNA poly
ref\|NP_001029384.1\|	123	132	4e-34	67-456	3-130	+1							275	DNA-directed RNA polymerase II subunit RPB3 [Bos taurus] ref\|XP_535283.2\| PREDICTED: DNA-directed RNA polymerase II subu
ref\|XP_006098765.1\|	124	132	4e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Myotis lucifugus] ref\|XP_006105249.1\| PREDICTED: DNA-direc
ref\|NP_989124.1\|	125	132	4e-34	67-456	3-130	+1							275	polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Xenopus (Silurana) tropicalis] gb\|AAH61444.1\| polymerase (RNA)
ref\|XP_008309823.1\|	127	132	5e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Cynoglossus semilaevis]
dbj\|GAN11086.1\|	136	132	7e-34	58-456	28-158	+1							304	conserved hypothetical protein [Mucor ambiguus]
ref\|XP_006148487.1\|	154	132	1e-33	67-456	71-198	+1							343	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Tupaia chinensis]
ref\|XP_006692108.1\|	157	132	2e-33	79-447	17-136	+1							344	RNA polymerase II subunit 3-like protein [Chaetomium thermophilum var. thermophilum DSM 1495] gb\|EGS23116.1\| RNA polyme
ref\|NP_001084998.1\|	128	131	5e-34	67-456	3-130	+1							275	polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Xenopus laevis] gb\|AAH70601.1\| MGC81245 protein [Xenopus laevi
ref\|XP_007883969.1\|	129	131	6e-34	67-456	3-130	+1							275	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB3 [Callorhinchus milii]
emb\|CEP13513.1\|	130	131	6e-34	79-456	12-134	+1							280	hypothetical protein [Parasitella parasitica]
ref\|XP_005873579.1\|	131	131	6e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Myotis brandtii] gb\|EPQ12264.1\| DNA-directed RNA polymerase II
ref\|XP_002035764.1\|	132	131	7e-34	67-456	3-130	+1							275	GM15286 [Drosophila sechellia] gb\|EDW51687.1\| GM15286 [Drosophila sechellia]
ref\|XP_001365715.1\|	133	131	7e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Monodelphis domestica]
ref\|XP_002088649.1\|	134	131	7e-34	67-456	3-130	+1							275	GE18688 [Drosophila yakuba] gb\|EDW88361.1\| GE18688 [Drosophila yakuba]
ref\|XP_003757327.1\|	135	131	7e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 isoform 1 [Sarcophilus harrisii]
ref\|XP_002079394.1\|	137	131	7e-34	67-456	3-130	+1							275	GD23930 [Drosophila simulans] gb\|EDX04979.1\| GD23930 [Drosophila simulans]
ref\|XP_003967131.1\|	138	131	7e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Takifugu rubripes]
ref\|XP_001988351.1\|	140	131	7e-34	67-456	3-130	+1							275	GH11119 [Drosophila grimshawi] ref\|XP_002002474.1\| GI12561 [Drosophila mojavensis] ref\|XP_002057472.1\| GJ18149 [Drosophi
ref\|XP_003739027.1\|	141	131	7e-34	67-495	3-145	+1							277	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Metaseiulus occidentalis]
emb\|CAF98942.1\|	142	131	7e-34	67-456	3-130	+1							275	unnamed protein product, partial [Tetraodon nigroviridis]
ref\|NP_477419.1\|	143	131	8e-34	67-456	3-130	+1							275	RNA polymerase II 33kD subunit [Drosophila melanogaster] emb\|CAB38635.1\| RNA polymerase II p33 subunit [Drosophila melan
gb\|KDR14837.1\|	145	131	9e-34	67-495	3-146	+1							276	DNA-directed RNA polymerase II subunit RPB3 [Zootermopsis nevadensis]
ref\|XP_008066216.1\|	146	131	9e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Tarsius syrichta]
ref\|XP_010637190.1\|	148	131	9e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Fukomys damarensis]
ref\|XP_006680656.1\|	149	131	9e-34	64-483	6-146	+1							285	hypothetical protein BATDEDRAFT_20338 [Batrachochytrium dendrobatidis JAM81] gb\|EGF78507.1\| hypothetical protein BATDED
ref\|XP_006752933.1\|	150	131	9e-34	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Myotis davidii] gb\|ELK38451.1\| DNA-directed RNA polymerase II s
gb\|EDL87316.1\|	144	130	8e-34	67-456	3-130	+1							241	polymerase (RNA) II (DNA directed) polypeptide C, isoform CRA_a [Rattus norvegicus]
ref\|XP_005078725.1\|	147	130	9e-34	67-456	3-130	+1							249	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Mesocricetus auratus]
ref\|XP_002064793.1\|	151	130	9e-34	67-456	3-130	+1							275	GK15011 [Drosophila willistoni] gb\|EDW75779.1\| GK15011 [Drosophila willistoni]
ref\|XP_005181593.1\|	152	130	1e-33	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Musca domestica]
gb\|AIK22454.1\|	153	130	1e-33	67-456	3-130	+1							269	DNA-directed RNA polymerase II polypeptide C, partial [Mytilus edulis]
ref\|XP_001356237.1\|	156	130	2e-33	67-456	3-130	+1							275	GA20659 [Drosophila pseudoobscura pseudoobscura] ref\|XP_002023215.1\| GL21238 [Drosophila persimilis] gb\|EAL33299.1\| GA20
ref\|NP_033116.2\|	158	130	2e-33	67-456	3-130	+1							275	DNA-directed RNA polymerase II subunit RPB3 [Mus musculus] ref\|NP_001012491.1\| DNA-directed RNA polymerase II subunit RP
dbj\|BAB23943.1\|	160	130	2e-33	67-456	3-130	+1							275	unnamed protein product [Mus musculus]
ref\|NP_001040388.1\|	162	130	2e-33	67-456	3-130	+1							275	DNA-directed RNA polymerase II polypeptide [Bombyx mori] gb\|ABF51298.1\| DNA-directed RNA polymerase II polypeptide [Bomb
emb\|CDS03118.1\|	163	130	2e-33	58-471	4-142	+1							280	Putative RNA polymerase Rpb3/Rpb11 dimerizationdomain-containing protein [Absidia idahoensis var. thermophila]
gb\|AAA36586.1\|	164	130	2e-33	67-456	3-130	+1							275	RNA polymerase subunit hRPB 33 [Homo sapiens] emb\|CAA11842.1\| RNA polymerase II subunit [Homo sapiens] emb\|CAA11843.1\| R
emb\|CDH51848.1\|	165	130	2e-33	58-471	4-142	+1							280	rna polymerase rpb3 rpb11 dimerization domain-containing protein [Lichtheimia corymbifera JMRC:FSU:9682]
ref\|XP_004371607.1\|	166	130	2e-33	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Trichechus manatus latirostris]
ref\|NP_116558.1\|	167	130	2e-33	67-456	3-130	+1							275	DNA-directed RNA polymerase II subunit RPB3 [Homo sapiens] ref\|NP_001245048.1\| DNA-directed RNA polymerase II subunit RP
ref\|XP_003416333.1\|	168	130	2e-33	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Loxodonta africana]
dbj\|BAE23500.1\|	187	130	5e-33	64-456	2-130	+1							332	unnamed protein product [Mus musculus]
dbj\|BAH13217.1\|	192	130	9e-33	67-456	3-130	+1							424	unnamed protein product [Homo sapiens]
gb\|EDL87319.1\|	118	129	3e-34	67-456	3-130	+1							165	polymerase (RNA) II (DNA directed) polypeptide C, isoform CRA_d [Rattus norvegicus]
dbj\|BAH12113.1\|	120	129	3e-34	67-456	3-130	+1							155	unnamed protein product [Homo sapiens]
ref\|XP_008485524.1\|	126	129	4e-34	67-456	3-130	+1							191	PREDICTED: DNA-directed RNA polymerase II subunit RPB3, partial [Diaphorina citri]
ref\|XP_003384595.1\|	169	129	3e-33	67-456	3-130	+1							274	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Amphimedon queenslandica]
gb\|EFX86636.1\|	170	129	3e-33	67-456	3-130	+1							274	hypothetical protein DAPPUDRAFT_313021 [Daphnia pulex]
ref\|XP_002711589.1\|	172	129	3e-33	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Oryctolagus cuniculus] ref\|XP_004583942.1\| PREDICTED: DNA-direc
gb\|ACO09755.1\|	173	129	3e-33	67-456	3-130	+1							275	DNA-directed RNA polymerase II 33 kDa polypeptide [Osmerus mordax]
sp\|P97760.1\|RPB3_MOUSE	174	129	3e-33	67-456	3-130	+1							275	RecName: Full=DNA-directed RNA polymerase II subunit RPB3; Short=RNA polymerase II subunit 3; Short=RNA polymerase II s
ref\|XP_011498580.1\|	175	129	4e-33	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Ceratosolen solmsi marchali]
ref\|XP_007228370.1\|	176	129	4e-33	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Astyanax mexicanus]
ref\|NP_001291019.1\|	177	129	4e-33	67-456	3-130	+1							275	polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Esox lucius] gb\|ACO13863.1\| DNA-directed RNA polymerase II sub
ref\|NP_001135345.1\|	178	129	4e-33	67-456	3-130	+1							275	DNA-directed RNA polymerase II subunit RPB3 [Salmo salar] gb\|ACI68248.1\| DNA-directed RNA polymerase II subunit RPB3 [Sa
ref\|XP_006897193.1\|	179	129	4e-33	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Elephantulus edwardii]
ref\|XP_004704704.1\|	182	129	4e-33	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Echinops telfairi]
ref\|XP_009066251.1\|	183	129	4e-33	67-456	3-130	+1							275	hypothetical protein LOTGIDRAFT_197656 [Lottia gigantea] gb\|ESO83069.1\| hypothetical protein LOTGIDRAFT_197656 [Lottia g
ref\|XP_970635.1\|	184	129	4e-33	67-495	3-146	+1							274	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Tribolium castaneum] gb\|EFA03015.1\| hypothetical protein TcasGA
emb\|CEJ02675.1\|	185	129	5e-33	58-456	4-126	+1							272	Putative RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus microsporus] emb\|CEI98448.1\| Putati
ref\|XP_006088697.1\|	186	129	5e-33	67-456	3-129	+1							274	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Myotis lucifugus]
ref\|XP_001628658.1\|	188	129	5e-33	67-456	3-130	+1							274	predicted protein [Nematostella vectensis] gb\|EDO36595.1\| predicted protein [Nematostella vectensis]
ref\|XP_010747372.1\|	190	129	6e-33	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Larimichthys crocea]
ref\|XP_956964.1\|	204	129	2e-32	79-429	16-129	+1							337	DNA-directed RNA polymerase II polypeptide [Neurospora crassa OR74A] ref\|XP_009851939.1\| hypothetical protein NEUTE1DRA
ref\|XP_011260585.1\|	194	128	1e-32	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Camponotus floridanus] gb\|EFN65520.1\| DNA-directed RNA polymera
gb\|AEE63493.1\|	197	128	1e-32	67-495	3-146	+1							275	unknown [Dendroctonus ponderosae] gb\|ENN72896.1\| hypothetical protein YQE_10466, partial [Dendroctonus ponderosae] gb\|ER
ref\|XP_002181139.1\|							107	127	4e-31	242-685	155-308	-2	320	predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gb\|EEC47062.1\| predicted protein [Phaeodactylum tricornutum CC
dbj\|BAE01792.1\|	193	127	1e-32	67-456	3-130	+1							251	unnamed protein product [Macaca fascicularis]
ref\|XP_002426352.1\|	198	127	1e-32	67-495	3-146	+1							275	DNA-directed RNA polymerase II 33 kDa polypeptide, putative [Pediculus humanus corporis] gb\|EEB13614.1\| DNA-directed RN
ref\|XP_002111988.1\|	199	127	1e-32	67-495	3-145	+1							274	hypothetical protein TRIADDRAFT_24132 [Trichoplax adhaerens] gb\|EDV25955.1\| hypothetical protein TRIADDRAFT_24132 [Trich
gb\|ACI66208.1\|	200	127	2e-32	67-456	3-130	+1							275	DNA-directed RNA polymerase II subunit RPB3 [Salmo salar]
ref\|XP_007610346.1\|	201	127	2e-32	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Cricetulus griseus]
gb\|ELT93136.1\|	202	127	2e-32	67-456	3-130	+1							270	hypothetical protein CAPTEDRAFT_155833 [Capitella teleta]
ref\|XP_005345644.1\|	203	127	2e-32	67-456	3-130	+1							275	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB3 [Microtus ochrogaster]
ref\|XP_003667202.1\|	207	127	8e-32	79-438	16-132	+1							337	hypothetical protein MYCTH_2312782 [Myceliophthora thermophila ATCC 42464] gb\|AEO61957.1\| hypothetical protein MYCTH_23
ref\|XP_001702786.1\|							108	126	7e-31	281-730	132-274	-2	275	DNA-directed RNA polymerase II, 36 kDa polypeptide [Chlamydomonas reinhardtii] gb\|EDP06565.1\| DNA-directed RNA polymera
ref\|XP_006887722.1\|	206	126	4e-32	67-456	3-130	+1							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Elephantulus edwardii]
ref\|XP_001228344.1\|	214	126	2e-31	79-447	16-135	+1							338	hypothetical protein CHGG_10417 [Chaetomium globosum CBS 148.51] gb\|EAQ84013.1\| hypothetical protein CHGG_10417 [Chaetom
gb\|KIW11790.1\|	217	126	2e-31	79-426	18-130	+1							334	hypothetical protein PV08_09062 [Exophiala spinifera]
ref\|XP_001471367.1\|							109	125	2e-30	233-715	134-294	-2	310	DNA-directed rna polymerase II subunit [Tetrahymena thermophila] sp\|P16925.1\|CNJC_TETTH RecName: Full=Conjugation stage-
ref\|XP_318245.2\|	208	125	1e-31	67-456	3-130	+1							273	AGAP010321-PA [Anopheles gambiae str. PEST] gb\|EAA13388.2\| AGAP010321-PA [Anopheles gambiae str. PEST]
gb\|KFB45912.1\|	209	125	1e-31	67-456	3-130	+1							273	AGAP010321-PA-like protein [Anopheles sinensis]
gb\|KFH73292.1\|	210	125	1e-31	79-471	9-148	+1							282	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Mortierella verticillata NRRL 6337]
gb\|KFO26949.1\|	211	125	1e-31	67-456	3-128	+1							273	DNA-directed RNA polymerase II subunit RPB3 [Fukomys damarensis]
ref\|XP_003486021.1\|	212	125	1e-31	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Bombus impatiens]
gb\|ETN64477.1\|	213	125	1e-31	67-456	3-130	+1							273	DNA-directed RNA polymerase II subunit [Anopheles darlingi]
ref\|XP_001659470.1\|	216	125	2e-31	67-495	3-148	+1							275	AAEL008755-PA [Aedes aegypti] gb\|EAT39449.1\| AAEL008755-PA [Aedes aegypti]
ref\|XP_011161410.1\|	218	125	2e-31	67-495	3-146	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Solenopsis invicta]
ref\|XP_008205458.1\|	219	125	2e-31	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Nasonia vitripennis]
ref\|XP_001895623.1\|	220	125	2e-31	67-453	3-129	+1							275	DNA-directed RNA polymerase II 33 kDa polypeptide [Brugia malayi] emb\|CDQ03112.1\| Protein Bm2624 [Brugia malayi]
ref\|XP_624836.1\|	221	125	2e-31	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Apis mellifera] ref\|XP_003698555.1\| PREDICTED: DNA-directe
ref\|XP_003699728.1\|	222	125	2e-31	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Megachile rotundata]
gb\|KIW44098.1\|	223	125	2e-31	79-426	18-130	+1							334	hypothetical protein PV06_05135 [Exophiala oligosperma]
ref\|XP_003658070.1\|	224	125	2e-31	79-447	15-134	+1							337	hypothetical protein THITE_2124530 [Thielavia terrestris NRRL 8126] gb\|AEO71734.1\| hypothetical protein THITE_2124530 [
ref\|XP_003867217.1\|	225	125	2e-31	79-441	7-124	+1							317	RNA polymerase II subunit B44 [Candida orthopsilosis Co 90-125] emb\|CCG21779.1\| RNA polymerase II subunit B44 [Candida o
gb\|KFA68700.1\|	230	125	3e-31	52-441	11-135	+1							340	hypothetical protein S40285_02607 [Stachybotrys chlorohalonata IBT 40285]
ref\|XP_011351433.1\|	226	124	3e-31	67-495	3-146	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Cerapachys biroi] gb\|EZA61007.1\| DNA-directed RNA polymerase II
gb\|ESA10282.1\|	227	124	3e-31	79-480	10-141	+1							279	hypothetical protein GLOINDRAFT_348258 [Rhizophagus irregularis DAOM 181602]
ref\|XP_011306562.1\|	228	124	3e-31	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Fopius arisanus]
gb\|EXX68254.1\|	229	124	3e-31	79-480	10-141	+1							279	Rpb3p [Rhizophagus irregularis DAOM 197198w]
gb\|EJW84811.1\|	232	124	3e-31	67-453	3-129	+1							275	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Wuchereria bancrofti]
ref\|XP_003345560.1\|	237	124	4e-31	79-429	16-129	+1							311	hypothetical protein SMAC_06213 [Sordaria macrospora k-hell] emb\|CCC07270.1\| unnamed protein product [Sordaria macrospor
ref\|XP_003143992.1\|	238	124	5e-31	67-453	3-129	+1							275	DNA-directed RNA polymerase II polypeptide [Loa loa] gb\|EFO20079.1\| RNA polymerase Rpb3/Rpb11 dimerization domain-contai
gb\|EFZ17186.1\|	239	124	6e-31	67-495	3-146	+1							325	hypothetical protein SINV_07940 [Solenopsis invicta]
gb\|KEY70700.1\|	240	124	6e-31	52-441	11-135	+1							340	hypothetical protein S7711_07326 [Stachybotrys chartarum IBT 7711] gb\|KFA78418.1\| hypothetical protein S40288_06399 [St
gb\|KFA50347.1\|	241	124	6e-31	52-441	11-135	+1							340	hypothetical protein S40293_07541 [Stachybotrys chartarum IBT 40293]
gb\|KFY30970.1\|	244	124	8e-31	79-486	14-149	+1							342	hypothetical protein V493_01497 [Pseudogymnoascus pannorum VKM F-4281 (FW-2241)]
ref\|XP_001909748.1\|	246	124	1e-30	79-429	16-129	+1							334	hypothetical protein [Podospora anserina S mat+] emb\|CAP70881.1\| unnamed protein product [Podospora anserina S mat+] emb
ref\|XP_011065530.1\|	242	123	7e-31	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Acromyrmex echinatior]
gb\|KHN83513.1\|	243	123	7e-31	67-456	3-130	+1							275	DNA-directed RNA polymerase II subunit RPB3 [Toxocara canis]
gb\|KFH40313.1\|	250	123	3e-30										348	DNA-directed RNA polymerase II subunit-like protein [Acremonium chrysogenum ATCC 11550]
ref\|XP_008549234.1\|	247	122	1e-30	67-456	3-130	+1							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Microplitis demolitor]
gb\|EYC32185.1\|	248	122	2e-30	67-456	3-134	+1							288	hypothetical protein Y032_0003g1449 [Ancylostoma ceylanicum]
gb\|KIH62572.1\|	249	122	2e-30	67-456	3-134	+1							288	RNA polymerase Rpb3/Rpb11 dimerization domain protein [Ancylostoma duodenale]
ref\|XP_005855278.1\|	233	120	3e-31	73-384	5-110	+1							121	DNA-directed RNA polymerase II subunit RPB3, partial [Nannochloropsis gaditana CCMP526] gb\|EKU21079.1\| DNA-directed RNA
gb\|EWM29509.1\|	245	119	1e-30	73-381	5-109	+1							121	rna polymerase ii core subunit [Nannochloropsis gaditana]
gb\|EJK63419.1\|							111	117	3e-27	242-688	158-312	-2	323	hypothetical protein THAOC_15929 [Thalassiosira oceanica]
ref\|XP_002289111.1\|							112	116	4e-27	242-685	144-297	-2	297	RP3A,-like protein to dna-directed RNA polymerase II third largest subunit [Thalassiosira pseudonana CCMP1335] gb\|EED94
ref\|XP_001439135.1\|							113	114	1e-26	200-688	135-294	-2	297	hypothetical protein [Paramecium tetraurelia strain d4-2] emb\|CAK71738.1\| unnamed protein product [Paramecium tetraureli
ref\|XP_001450201.1\|							114	114	2e-26	200-688	146-305	-2	308	hypothetical protein [Paramecium tetraurelia strain d4-2] emb\|CAK82804.1\| unnamed protein product [Paramecium tetraureli
ref\|XP_009306510.1\|							115	111	4e-25	221-688	132-296	-2	337	DNA-directed RNA polymerase II subunit 3 [Trypanosoma grayi] gb\|KEG15249.1\| DNA-directed RNA polymerase II subunit 3 [Tr
ref\|XP_002773904.1\|							116	111	5e-25	191-727	141-318	-2	336	conjugation stage-specific protein, putative [Perkinsus marinus ATCC 50983] gb\|EER05720.1\| conjugation stage-specific p
gb\|ESS68208.1\|							117	110	6e-25	221-688	132-296	-2	337	DNA-directed RNA polymerase II subunit 3 [Trypanosoma cruzi Dm28c]
gb\|EKF33119.1\|							118	110	8e-25	221-688	132-296	-2	337	DNA-directed RNA polymerase II subunit 3, putative [Trypanosoma cruzi marinkellei]
gb\|EKF98383.1\|							119	110	9e-25	221-688	160-324	-2	365	DNA-directed RNA polymerase II subunit 3, putative [Trypanosoma cruzi]
ref\|XP_818836.1\|							120	108	6e-24	233-688	158-316	-2	363	DNA-directed RNA polymerase II subunit 3 [Trypanosoma cruzi strain CL Brener] gb\|EAN96985.1\| DNA-directed RNA polymeras
gb\|ESL08184.1\|							121	107	1e-23	233-688	132-290	-2	337	DNA-directed RNA polymerase II subunit 3 [Trypanosoma rangeli SC58]
gb\|EWM29508.1\|							122	105	3e-23	233-673	106-255	-2	267	rna polymerase ii core subunit, partial [Nannochloropsis gaditana]
ref\|XP_002142225.1\|							123	105	7e-23	245-718	139-307	-2	348	DNA-directed RNA polymerase II subunit RPB3 [Cryptosporidium muris RN66] gb\|EEA07876.1\| DNA-directed RNA polymerase II
ref\|XP_004035127.1\|							124	104	8e-23	245-715	139-295	-2	307	hypothetical protein IMG5_105540 [Ichthyophthirius multifiliis] gb\|EGR31641.1\| hypothetical protein IMG5_105540 [Ichthyo
emb\|CBK22749.2\|							125	104	1e-22	233-715	126-290	-2	312	unnamed protein product [Blastocystis hominis]
dbj\|BAN65959.1\|							126	103	4e-22	233-691	188-347	-2	382	DNA-directed RNA polymerase II, putative [Babesia bovis]
gb\|KFH02814.1\|							127	102	2e-21	245-682	296-446	-2	484	DNA-directed RNA polymerase II RPB3 [Toxoplasma gondii MAS]
gb\|EPR60376.1\|							128	102	2e-21	245-682	296-446	-2	484	DNA-directed RNA polymerase II RPB3 [Toxoplasma gondii GT1] gb\|KFG34038.1\| DNA-directed RNA polymerase II RPB3 [Toxoplas
gb\|KFG39349.1\|							129	102	2e-21	245-682	296-446	-2	484	DNA-directed RNA polymerase II RPB3 [Toxoplasma gondii p89] gb\|KFG99589.1\| DNA-directed RNA polymerase II RPB3 [Toxoplas
ref\|XP_001608910.1\|							130	100	3e-21	233-691	188-347	-2	382	DNA-directed RNA polymerase II [Babesia bovis T2Bo] gb\|EDO05342.1\| DNA-directed RNA polymerase II, putative [Babesia bov
ref\|XP_002366511.1\|							131	100	7e-21	245-682	296-446	-2	484	DNA-directed RNA polymerase II, putative [Toxoplasma gondii ME49] gb\|EPT30854.1\| DNA-directed RNA polymerase II RPB3 [To
ref\|XP_008887556.1\|							134	99.8	1e-20	245-682	296-446	-2	484	DNA-directed RNA polymerase II RPB3 [Hammondia hammondi] gb\|KEP61891.1\| DNA-directed RNA polymerase II RPB3 [Hammondia h
gb\|EPY40328.1\|							132	99.0	7e-21	221-688	96-260	-2	301	DNA-directed RNA polymerase II subunit RPB3 [Angomonas deanei] gb\|EPY41503.1\| DNA-directed RNA polymerase II subunit RPB
gb\|EPY29248.1\|							133	99.0	1e-20	221-688	133-297	-2	338	DNA-directed RNA polymerase II subunit RPB3 [Angomonas deanei] gb\|EPY35318.1\| DNA-directed RNA polymerase II subunit RPB
ref\|XP_003880837.1\|							135	98.2	2e-20	248-670	199-330	-2	346	rna polymerase II, related [Neospora caninum Liverpool] emb\|CBZ50804.1\| rna polymerase II, related [Neospora caninum Liv
ref\|XP_003881797.1\|							142	98.2	7e-20	245-682	309-459	-2	514	hypothetical protein NCLIV_015560 [Neospora caninum Liverpool] emb\|CBZ51764.1\| hypothetical protein NCLIV_015560 [Neospo
emb\|CCW67473.1\|							136	97.1	4e-20	221-688	133-297	-2	338	unnamed protein product [Phytomonas sp. isolate Hart1]
ref\|XP_008887664.1\|							137	97.1	5e-20	248-670	199-330	-2	346	DNA-directed RNA polymerase I RPAC1 [Hammondia hammondi] gb\|KEP61675.1\| DNA-directed RNA polymerase I RPAC1 [Hammondia h
emb\|CCC89910.1\|							138	97.1	5e-20	206-688	192-356	-2	392	unnamed protein product [Trypanosoma congolense IL3000]
ref\|XP_001348113.1\|							139	96.7	6e-20	233-676	185-324	-2	333	DNA-directed RNA polymerase I, putative [Plasmodium falciparum 3D7] gb\|AAN36026.1\|AE014842_48 DNA-directed RNA polymera
ref\|XP_002368807.1\|							140	96.7	6e-20	248-670	199-330	-2	346	DNA-directed RNA polymerases I and III subunit RPAC1, putative [Toxoplasma gondii ME49] gb\|EPR57260.1\| DNA-directed RNA
gb\|EUR70396.1\|							141	96.7	6e-20	233-676	185-324	-2	333	hypothetical protein PFBG_03623 [Plasmodium falciparum 7G8]
emb\|CDR95474.1\|							145	95.9	1e-19	233-718	207-370	-2	402	DNA-directed RNA polymerase II, putative [Babesia bigemina]
emb\|CDO65232.1\|							144	95.5	1e-19	233-676	185-324	-2	333	DNA-directed RNA polymerase I, putative [Plasmodium reichenowi]
gb\|EUR54704.1\|							146	95.5	1e-19	248-676	185-319	-2	319	hypothetical protein PFBG_06059, partial [Plasmodium falciparum 7G8]
ref\|XP_001612274.1\|							149	95.1	2e-19	248-676	170-303	-2	319	DNA-directed RNA polymerase, alpha subunit, N terminal domain containing protein [Babesia bovis] gb\|EDO08706.1\| DNA-dir
ref\|XP_765556.1\|							151	95.1	2e-19	149-688	150-346	-2	354	DNA-directed RNA polymerase II [Theileria parva strain Muguga] gb\|EAN33273.1\| DNA-directed RNA polymerase II, putative [
emb\|CCW59538.1\|							152	95.1	2e-19	221-688	133-297	-2	338	unnamed protein product [Phytomonas sp. isolate EM1]
gb\|KDO59170.1\|							153	94.4	5e-19	236-670	236-377	-2	382	hypothetical protein CISIN_1g016805mg [Citrus sinensis] gb\|KDO59171.1\| hypothetical protein CISIN_1g016805mg [Citrus sin
ref\|XP_006474843.1\|							154	94.4	5e-19	236-670	236-377	-2	382	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Citrus sinensis]
ref\|XP_954676.1\|							155	93.6	6e-19	149-688	150-346	-2	354	DNA-directed RNA polymerase ii [Theileria annulata] emb\|CAI73996.1\| DNA-directed RNA polymerase ii, putative [Theileria
ref\|XP_006452630.1\|							158	93.6	1e-18	236-670	275-416	-2	421	hypothetical protein CICLE_v10008413mg [Citrus clementina] gb\|ESR65870.1\| hypothetical protein CICLE_v10008413mg [Citrus
ref\|XP_009412082.1\|							157	93.2	1e-18	236-670	224-363	-2	368	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Musa acuminata subsp. malaccensis]
ref\|XP_011038839.1\|							159	92.4	2e-18	236-670	244-385	-2	390	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Populus euphratica] ref\|XP_011038840.1\| PREDICTED: DNA
ref\|XP_003600393.1\|							160	92.4	2e-18	236-670	244-394	-2	399	DNA-directed RNA polymerase subunit D [Medicago truncatula] gb\|AES70644.1\| DNA-directed RNA polymerase [Medicago truncat
ref\|XP_008349337.1\|							161	92.4	2e-18	236-679	245-389	-2	394	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Malus domestica]
ref\|XP_002300385.1\|							163	92.4	3e-18	236-670	244-385	-2	390	DNA-directed RNA polymerase family protein [Populus trichocarpa] gb\|EEE85190.1\| DNA-directed RNA polymerase family prote
ref\|XP_009791015.1\|							164	92.4	3e-18	236-670	253-393	-2	398	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 isoform X1 [Nicotiana sylvestris] ref\|XP_009791016.1\| P
ref\|XP_009367231.1\|							165	92.0	3e-18	236-679	245-389	-2	394	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like isoform X2 [Pyrus x bretschneideri] ref\|XP_0093794
ref\|XP_004498147.1\|							166	92.0	4e-18	236-670	242-383	-2	388	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Cicer arietinum]
ref\|XP_005840731.1\|							162	91.7	2e-18	212-670	155-318	-2	319	hypothetical protein GUITHDRAFT_100722 [Guillardia theta CCMP2712] gb\|EKX53751.1\| hypothetical protein GUITHDRAFT_100722
ref\|XP_009367230.1\|							168	91.7	4e-18	236-679	245-390	-2	395	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like isoform X1 [Pyrus x bretschneideri] ref\|XP_0093794
ref\|XP_668386.1\|							167	91.3	4e-18	236-679	146-317	-2	355	conjugation stage-specific protein [Cryptosporidium hominis TU502]
ref\|XP_009349148.1\|							173	91.3	7e-18	236-679	245-389	-2	394	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases I and III subunit rpac1-like [Pyrus x bretschneideri]
emb\|CDW73871.1\|							169	90.9	4e-18	245-730	152-310	-2	325	rna polymerase ii core subunit [Stylonychia lemnae]
ref\|XP_844140.1\|							170	90.9	6e-18	206-688	132-301	-2	337	DNA-directed RNA polymerase II subunit 3 [Trypanosoma brucei brucei TREU927] gb\|AAX81059.1\| DNA-directed RNA polymerase
emb\|CDR11955.1\|							171	90.9	6e-18	218-673	189-334	-2	336	DNA-directed RNA polymerase I, putative [Plasmodium chabaudi chabaudi]
ref\|XP_001444646.1\|							172	90.5	6e-18	245-673	176-310	-2	316	hypothetical protein [Paramecium tetraurelia strain d4-2] emb\|CAK77249.1\| unnamed protein product [Paramecium tetraureli
ref\|XP_004251939.1\|							174	90.5	1e-17	236-670	248-388	-2	393	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 [Solanum lycopersicum] ref\|XP_010313951.1\| PREDICTED: D
gb\|EUD73052.1\|							175	90.1	1e-17	218-673	189-334	-2	336	DNA-directed RNA polymerase I and III subunit RPAC1 [Plasmodium vinckei petteri]
ref\|XP_628094.1\|							176	90.1	1e-17	236-679	146-317	-2	355	RNA polymerase II B3 subunit [Cryptosporidium parvum Iowa II] gb\|EAK88359.1\| RNA polymerase II B3 subunit [Cryptosporidi
ref\|XP_004488284.1\|							179	90.1	1e-17	236-670	242-383	-2	388	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Cicer arietinum]
gb\|EJY68358.1\|							177	89.7	1e-17	236-733	155-317	-2	329	RNA polymerase II core subunit [Oxytricha trifallax]
gb\|EAR92630.3\|							178	89.7	1e-17	227-673	198-338	-2	339	DNA-directed RNA polymerase I and III subunit RPAC1 [Tetrahymena thermophila SB210]
gb\|KDP39298.1\|							181	89.7	2e-17	236-670	230-371	-2	376	hypothetical protein JCGZ_01055 [Jatropha curcas]
ref\|XP_009597355.1\|							184	89.7	2e-17	236-670	248-388	-2	393	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 [Nicotiana tomentosiformis]
ref\|XP_008384583.1\|							182	89.4	2e-17	236-709	205-352	-2	357	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Malus domestica]
ref\|XP_009407931.1\|							183	89.4	2e-17	236-670	226-365	-2	370	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Musa acuminata subsp. malaccensis]
gb\|EPY23512.1\|							180	89.0	2e-17	206-709	89-265	-2	301	DNA-directed RNA polymerase II subunit RPB3 [Strigomonas culicis]
gb\|EPY33857.1\|							185	89.0	2e-17	206-709	126-302	-2	338	DNA-directed RNA polymerase II subunit RPB3 [Strigomonas culicis]
ref\|XP_002139766.1\|							186	88.6	3e-17	221-670	206-347	-2	351	DNA-directed RNA polymerases I and III subunit RPAC1 [Cryptosporidium muris RN66] gb\|EEA05417.1\| DNA-directed RNA polym
ref\|XP_006344900.1\|							201	88.6	5e-17	236-670	248-388	-2	393	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Solanum tuberosum]
ref\|XP_011130152.1\|							188	88.2	4e-17	236-673	100-267	-2	300	putative DNA-directed RNA polymerase II, partial [Gregarina niphandrodes] gb\|EZG67819.1\| putative DNA-directed RNA polym
ref\|XP_001466520.1\|							189	88.2	4e-17	224-688	133-292	-2	337	DNA-directed RNA polymerase I-like protein [Leishmania infantum JPCM5] ref\|XP_003862432.1\| DNA-directed RNA polymerase
gb\|KDE02207.1\|							190	88.2	4e-17	233-694	187-335	-2	342	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Microbotryum violaceum p1A1 Lamole]
ref\|XP_001445184.1\|							191	88.2	4e-17	245-673	176-310	-2	316	hypothetical protein [Paramecium tetraurelia strain d4-2] emb\|CAK77787.1\| unnamed protein product [Paramecium tetraureli
ref\|XP_002547167.1\|							193	88.2	4e-17	233-673	192-331	-2	337	DNA-directed RNA polymerases I and III 40 kDa polypeptide [Candida tropicalis MYA-3404] gb\|EER34612.1\| DNA-directed RNA
ref\|XP_008624975.1\|							198	88.2	5e-17	218-673	187-332	-2	334	DNA-directed RNA polymerase I and III subunit RPAC1 [Plasmodium vinckei vinckei] gb\|KEG02362.1\| DNA-directed RNA polyme
ref\|WP_004030361.1\|							192	87.8	4e-17	236-670	122-257	-2	266	DNA-directed RNA polymerase subunit D [Methanobacterium formicicum] gb\|EKF85921.1\| DNA-directed RNA polymerase subunit D
gb\|EMD49037.1\|							194	87.8	4e-17	245-730	119-272	-2	283	DNA-directed RNA polymerase II subunit, putative [Entamoeba histolytica KU27] gb\|EMS14826.1\| DNA-directed RNA polymeras
gb\|KJB12014.1\|							195	87.8	4e-17	236-670	158-298	-2	303	hypothetical protein B456_002G1021002, partial [Gossypium raimondii]
ref\|XP_008857990.1\|							199	87.8	5e-17	245-730	119-272	-2	283	DNA-directed RNA polymerase, alpha subunit, N-terminal domain containing protein [Entamoeba nuttalli P19] gb\|EKE39676.1
emb\|CCC47320.1\|							200	87.8	5e-17	233-688	132-290	-2	337	putative DNA-directed RNA polymerase II subunit 3 [Trypanosoma vivax Y486]
gb\|KFH65202.1\|							203	87.8	7e-17	188-670	202-354	-2	357	DNA-directed RNA Polymerase III subunit C5 [Mortierella verticillata NRRL 6337]
ref\|XP_010676084.1\|							204	87.8	7e-17	236-688	207-352	-2	357	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Beta vulgaris subsp. vulgaris]
ref\|XP_001773900.1\|							205	87.8	7e-17	236-706	205-355	-2	360	predicted protein [Physcomitrella patens] gb\|EDQ61248.1\| predicted protein [Physcomitrella patens]
gb\|KFG29789.1\|							222	87.8	2e-16	311-682	296-424	-2	463	DNA-directed RNA polymerase II RPB3 [Toxoplasma gondii GAB2-2007-GAL-DOM2]
ref\|XP_007020446.1\|							197	87.4	5e-17	236-670	125-265	-2	270	DNA-directed RNA polymerases I and III subunit rpac1 isoform 3 [Theobroma cacao] gb\|EOY11971.1\| DNA-directed RNA polyme
ref\|XP_003866410.1\|							207	87.4	8e-17	233-673	192-330	-2	336	Rpc40 RNA polymerase [Candida orthopsilosis Co 90-125] emb\|CCG20970.1\| Rpc40 RNA polymerase [Candida orthopsilosis Co 90
ref\|WP_011751955.1\|							206	87.0	8e-17	242-706	117-261	-2	283	RNA polymerase, insert [Thermofilum pendens] ref\|YP_919693.1\| RNA polymerase, insert [Thermofilum pendens Hrk 5] gb\|ABL7
ref\|XP_001737769.1\|							208	87.0	9e-17	245-730	119-272	-2	283	DNA-directed RNA polymerase subunit D [Entamoeba dispar SAW760] gb\|EDR25860.1\| DNA-directed RNA polymerase subunit D, pu
ref\|XP_007020445.1\|							210	87.0	9e-17	236-670	166-306	-2	311	RNA polymerase I subunit 43 isoform 2 [Theobroma cacao] gb\|EOY11970.1\| RNA polymerase I subunit 43 isoform 2 [Theobroma
emb\|CDS12355.1\|							213	87.0	1e-16	200-670	199-350	-2	352	hypothetical protein LRAMOSA04550 [Absidia idahoensis var. thermophila]
gb\|ETL99722.1\|							214	87.0	1e-16	242-670	179-316	-2	344	hypothetical protein L917_03475 [Phytophthora parasitica]
ref\|XP_007020447.1\|							215	87.0	1e-16	236-670	178-318	-2	323	RNA polymerase I subunit 43 isoform 4 [Theobroma cacao] gb\|EOY11972.1\| RNA polymerase I subunit 43 isoform 4 [Theobroma
ref\|XP_676509.1\|							217	87.0	1e-16	218-673	189-334	-2	334	DNA-directed RNA polymerase I [Plasmodium berghei strain ANKA] emb\|CAH97452.1\| DNA-directed RNA polymerase I, putative [
ref\|XP_008915724.1\|							218	87.0	1e-16	242-670	179-316	-2	344	hypothetical protein PPTG_19124 [Phytophthora parasitica INRA-310] gb\|ETI55259.1\| hypothetical protein F443_02053 [Phyto
ref\|XP_007020444.1\|							219	87.0	2e-16	236-670	238-378	-2	383	RNA polymerase I subunit 43 isoform 1 [Theobroma cacao] gb\|EOY11969.1\| RNA polymerase I subunit 43 isoform 1 [Theobroma
ref\|XP_002270559.1\|							221	87.0	2e-16	236-718	214-367	-2	372	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Vitis vinifera] ref\|XP_010644604.1\| PREDICTED: DNA-dir
ref\|XP_651491.1\|							212	86.7	1e-16	245-730	119-272	-2	283	DNA-directed RNA polymerase II subunit [Entamoeba histolytica HM-1:IMSS] gb\|EAL46103.1\| DNA-directed RNA polymerase II
ref\|XP_003722088.1\|							220	86.7	2e-16	224-688	133-292	-2	337	DNA-directed RNA polymerase I-like protein [Leishmania major strain Friedlin] emb\|CBZ12345.1\| DNA-directed RNA polymera
ref\|XP_010248371.1\|							224	86.7	2e-16	236-670	227-367	-2	372	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Nelumbo nucifera]
ref\|XP_008384587.1\|							229	86.7	3e-16	236-679	245-389	-2	394	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like isoform X2 [Malus domestica]
emb\|CEA12664.1\|							216	86.3	1e-16	236-670	122-257	-2	266	DNA-directed RNA polymerase subunit D [Methanobacterium formicicum] gb\|AIS31200.1\| DNA-directed RNA polymerase subunit D
gb\|KJB74905.1\|							226	86.3	2e-16	254-670	203-336	-2	340	hypothetical protein B456_012G013700 [Gossypium raimondii]
ref\|XP_010942580.1\|							228	86.3	2e-16	236-670	223-362	-2	367	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 [Elaeis guineensis]
ref\|XP_008218433.1\|							235	86.3	4e-16	236-670	248-389	-2	394	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Prunus mume]
ref\|XP_008384586.1\|							239	86.3	4e-16	236-679	245-390	-2	395	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like isoform X1 [Malus domestica]
ref\|XP_007205309.1\|							240	86.3	4e-16	236-670	248-389	-2	394	hypothetical protein PRUPE_ppa006811mg [Prunus persica] gb\|EMJ06508.1\| hypothetical protein PRUPE_ppa006811mg [Prunus pe
ref\|WP_008514834.1\|							223	85.9	2e-16	236-670	122-257	-2	266	DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Methanobacterium sp. Maddingley MBC34] gb\|EKQ53003.1\| DNA-dir
ref\|XP_002896889.1\|							225	85.9	2e-16	242-670	140-277	-2	304	DNA-directed RNA polymerases I and III 40 kDa polypeptide [Phytophthora infestans T30-4] gb\|EEY66588.1\| DNA-directed RN
ref\|XP_001615546.1\|							227	85.9	2e-16	209-673	186-333	-2	333	DNA-directed RNA polymerase I [Plasmodium vivax Sal-1] gb\|EDL45819.1\| DNA-directed RNA polymerase I, putative [Plasmodiu
ref\|XP_003872549.1\|							230	85.9	3e-16	224-688	133-292	-2	337	DNA-directed RNA polymerase I-like protein [Leishmania mexicana MHOM/GT/2001/U1103] emb\|CBZ24020.1\| DNA-directed RNA po
ref\|XP_002896890.1\|							231	85.9	3e-16	242-670	175-312	-2	339	DNA-directed RNA polymerase I and III subunit RPAC1, putative [Phytophthora infestans T30-4] gb\|EEY66589.1\| DNA-directe
ref\|XP_002997258.1\|							232	85.9	3e-16	242-670	179-316	-2	343	DNA-directed RNA polymerase I and III subunit RPAC1, putative [Phytophthora infestans T30-4] gb\|EEY69491.1\| DNA-directe
ref\|XP_010534813.1\|							238	85.9	4e-16	236-670	234-374	-2	379	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Tarenaya hassleriana]
ref\|XP_011461865.1\|							245	85.9	5e-16	242-670	252-391	-2	398	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Fragaria vesca subsp. vesca]
emb\|CCF73618.1\|							233	85.5	3e-16	227-673	138-287	-2	324	unnamed protein product [Babesia microti strain RI]
ref\|XP_006686591.1\|							234	85.5	3e-16	233-724	185-330	-2	336	hypothetical protein CANTEDRAFT_113900 [Candida tenuis ATCC 10573] ref\|XP_006686592.1\| hypothetical protein CANTEDRAFT_1
emb\|CDJ38198.1\|							237	85.5	4e-16	233-670	177-313	-2	322	DNA-directed RNA polymerases I and III subunit RPAC1, putative [Eimeria tenella]
ref\|XP_009688856.1\|							242	85.5	4e-16	245-727	139-314	-2	354	DNA-directed RNA polymerase II [Theileria orientalis strain Shintoku] dbj\|BAM38555.1\| DNA-directed RNA polymerase II [Th
gb\|KDQ33637.1\|							243	85.5	4e-16	203-679	184-339	-2	344	hypothetical protein PLEOSDRAFT_1032563 [Pleurotus ostreatus PC15]
emb\|CEG64285.1\|							236	85.1	4e-16	203-670	117-267	-2	269	Putative DNA-directed RNA polymerase I and III subunit RPAC1 [Rhizopus microsporus]
ref\|XP_009539529.1\|							244	85.1	5e-16	242-670	179-316	-2	343	hypothetical protein PHYSODRAFT_356217 [Phytophthora sojae] gb\|EGZ05020.1\| hypothetical protein PHYSODRAFT_356217 [Phyto
gb\|ETK93167.1\|							246	85.1	5e-16	242-670	179-316	-2	344	hypothetical protein L915_03611 [Phytophthora parasitica] gb\|ETL46584.1\| hypothetical protein L916_03556 [Phytophthora p
ref\|XP_004222652.1\|							247	85.1	6e-16	233-673	186-324	-2	333	DNA-directed RNA polymerase I, partial [Plasmodium cynomolgi strain B] dbj\|GAB66705.1\| DNA-directed RNA polymerase I, p
ref\|XP_002259436.1\|							248	85.1	6e-16	233-673	186-324	-2	333	DNA-diDNA-directed RNA polymerase I [Plasmodium knowlesi strain H] emb\|CAQ40209.1\| DNA-diDNA-directed RNA polymerase I,
emb\|CEG64286.1\|							241	84.7	4e-16	203-670	110-260	-2	262	Putative DNA-directed RNA polymerase I and III subunit RPAC1 [Rhizopus microsporus]
ref\|XP_002774720.1\|							249	84.7	6e-16	179-670	144-294	-2	310	DNA-directed RNA polymerase I, putative [Perkinsus marinus ATCC 50983] gb\|EER06536.1\| DNA-directed RNA polymerase I, pu
dbj\|GAA27309.2\|							250	84.3	6e-16				266	DNA-directed RNA polymerase II subunit RPB3 [Clonorchis sinensis]
gb\|KHG01265.1\|							196	1	88.6				380	DNA-directed RNA polymerases I and III subunit RPAC1 [Gossypium arboreum]
emb\|CDH56512.1\|							209	1	87.4				352	dna-directed rna polymerases i and iii subunitrpac1 [Lichtheimia corymbifera JMRC:FSU:9682]
ref\|NP_001156090.1\|	109	e	132										273	DNA-directed RNA polymerase II polypeptide-like [Acyrthosiphon pisum] dbj\|BAH71223.1\| ACYPI001769 [Acyrthosiphon pisum]
dbj\|BAD06460.1\|	116	t	132										275	homologue of DNA-directed RNA polymerase II subunit [Antheraea pernyi] dbj\|BAD06461.1\| homologue of DNA-directed RNA po
gb\|AAZ32911.1\|	40	t	240				143	t	94.0				184	DNA-directed RNA polymerase II third largest subunit [Medicago sativa]