Clone JMSF010N19 [sequences]

contigF:002128 contigR:011233
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_009771507.1|31012e-22145-3181-58+141653e-55167-622461-599-3609PREDICTED: THO complex subunit 1 isoform X1 [Nicotiana sylvestris]
ref|XP_011086264.1|61006e-22133-3182-63+1101642e-54167-622466-604-3614PREDICTED: THO complex subunit 1 [Sesamum indicum]
ref|XP_004230044.1|797.45e-21145-3181-58+151653e-55167-622461-599-3608PREDICTED: THO complex subunit 1 isoform X3 [Solanum lycopersicum]
ref|XP_006347676.1|897.45e-21145-3181-58+1121606e-54242-622461-591-3609PREDICTED: THO complex subunit 1-like [Solanum tuberosum]
ref|XP_007010828.1|3488.21e-17145-3182-59+111693e-56242-622461-591-3602Nuclear matrix protein-related isoform 1 [Theobroma cacao] gb|EOY19638.1| Nuclear matrix protein-related isoform 1 [Theo
ref|XP_009608815.1|41003e-22145-3181-58+1231579e-53254-622461-587-3605PREDICTED: THO complex subunit 1 isoform X1 [Nicotiana tomentosiformis]
ref|XP_010659077.1|2191.38e-19145-3181-58+1131621e-53167-622461-591-3601PREDICTED: THO complex subunit 1-like isoform X1 [Vitis vinifera] ref|XP_010659078.1| PREDICTED: THO complex subunit 1-l
ref|XP_010659079.1|2091.38e-19145-3181-58+1141621e-53167-622447-577-3587PREDICTED: THO complex subunit 1-like isoform X2 [Vitis vinifera]
ref|XP_010659074.1|1991.38e-19145-3181-58+1191622e-53167-622447-577-3587PREDICTED: THO complex subunit 1-like isoform X2 [Vitis vinifera]
ref|XP_002264619.2|2291.38e-19145-3181-58+1181622e-53167-622461-591-3601PREDICTED: THO complex subunit 1-like isoform X1 [Vitis vinifera] ref|XP_010659073.1| PREDICTED: THO complex subunit 1-l
emb|CBI35079.3|2590.51e-18106-3181-70+1171622e-53167-622473-603-3613unnamed protein product [Vitis vinifera]
ref|XP_011034701.1|3685.57e-17145-3181-58+191679e-55167-622460-598-3608PREDICTED: THO complex subunit 1-like [Populus euphratica]
emb|CBI35093.3|2689.72e-18109-3183-70+1151611e-53167-622473-603-3613unnamed protein product [Vitis vinifera]
ref|XP_002299188.1|3785.57e-17145-3181-58+1111654e-54167-622460-598-3608hypothetical protein POPTR_0001s06900g [Populus trichocarpa] gb|EEE83993.1| hypothetical protein POPTR_0001s06900g [Popu
ref|XP_007204592.1|1792.04e-19145-3121-56+1251589e-52242-622456-586-3604hypothetical protein PRUPE_ppa003099mg [Prunus persica] gb|EMJ05791.1| hypothetical protein PRUPE_ppa003099mg [Prunus pe
ref|XP_006432406.1|1194.47e-20145-3181-58+1271554e-51248-622460-588-3608hypothetical protein CICLE_v10000631mg [Citrus clementina] gb|ESR45646.1| hypothetical protein CICLE_v10000631mg [Citrus
gb|KHG00278.1|2989.44e-18145-3182-59+1201603e-53167-622461-601-3611THO complex subunit 1 [Gossypium arboreum] gb|KHG03477.1| THO complex subunit 1 [Gossypium arboreum] gb|KHG16973.1| THO
gb|KJB75025.1|3089.04e-18145-3182-59+1211596e-53167-622461-601-3611hypothetical protein B456_012G019300 [Gossypium raimondii]
ref|XP_006465778.1|2390.91e-18145-3181-58+1261574e-51248-622459-587-3607PREDICTED: THO complex subunit 1-like isoform X2 [Citrus sinensis]
ref|XP_006465777.1|2490.91e-18145-3181-58+1281574e-51248-622460-588-3608PREDICTED: THO complex subunit 1-like isoform X1 [Citrus sinensis]
ref|XP_010057860.1|1392.82e-19145-3181-58+1321523e-49167-622461-598-3608PREDICTED: THO complex subunit 1 [Eucalyptus grandis] gb|KCW75199.1| hypothetical protein EUGRSUZ_E03954 [Eucalyptus gra
ref|XP_009353122.1|1492.82e-19145-3181-58+1371511e-48242-622461-584-3603PREDICTED: THO complex subunit 1 [Pyrus x bretschneideri] ref|XP_009353123.1| PREDICTED: THO complex subunit 1 [Pyrus x
ref|XP_011020432.1|4582.01e-15145-3181-58+1291596e-51167-619461-598-3608PREDICTED: THO complex subunit 1-like [Populus euphratica]
gb|KDP40562.1|1592.43e-19145-3181-58+1341475e-49248-622461-588-3608hypothetical protein JCGZ_24561 [Jatropha curcas]
ref|XP_002529986.1|2889.73e-18145-3181-58+1331474e-49167-622461-598-3608nuclear matrix protein, putative [Ricinus communis] gb|EEF32391.1| nuclear matrix protein, putative [Ricinus communis]
ref|XP_002303943.2|4282.41e-15145-3181-58+1301542e-49167-619480-619-3629hypothetical protein POPTR_0003s19340g [Populus trichocarpa] gb|EEE78922.2| hypothetical protein POPTR_0003s19340g [Popu
ref|XP_008460496.1|4084.32e-16154-31810-64+1381442e-48167-622467-604-3614PREDICTED: THO complex subunit 1 [Cucumis melo]
ref|XP_007148665.1|2789.72e-18145-3181-58+1411376e-45167-622460-594-3604hypothetical protein PHAVU_005G004500g [Phaseolus vulgaris] gb|ESW20659.1| hypothetical protein PHAVU_005G004500g [Phase
ref|XP_004140313.1|4882.01e-15154-31810-64+1361441e-48167-622460-597-3607PREDICTED: THO complex subunit 1-like [Cucumis sativus]
gb|KGN51016.1|4981.62e-15154-31810-64+1351441e-48167-622467-604-3614hypothetical protein Csa_5G407100 [Cucumis sativus]
ref|XP_003522894.1|3189.04e-18145-3181-58+1441304e-43167-622461-595-3605PREDICTED: THO complex subunit 1 isoform X1 [Glycine max] ref|XP_006578423.1| PREDICTED: THO complex subunit 1 isoform X
ref|XP_010684229.1|3587.81e-17145-3181-58+1451308e-43167-622459-597-3607PREDICTED: THO complex subunit 1 isoform X1 [Beta vulgaris subsp. vulgaris]
ref|XP_010684230.1|3387.89e-18145-3181-58+1471299e-43167-622397-535-3545PREDICTED: THO complex subunit 1 isoform X2 [Beta vulgaris subsp. vulgaris]
ref|XP_004307195.1|1892.04e-19145-3181-58+1531215e-41245-622460-588-3611PREDICTED: THO complex subunit 1 isoform X1 [Fragaria vesca subsp. vesca]
ref|XP_010557907.1|4682.01e-15145-3181-58+1431312e-44242-622460-590-3600PREDICTED: THO complex subunit 1 isoform X2 [Tarenaya hassleriana]
ref|XP_010557906.1|4782.01e-15145-3181-58+1421312e-44242-622461-591-3601PREDICTED: THO complex subunit 1 isoform X1 [Tarenaya hassleriana]
ref|XP_004498672.1|3984.72e-16145-3181-58+1511257e-42242-622450-576-3595PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 1-like [Cicer arietinum]
ref|XP_010266403.1|4183.64e-16145-31834-91+1521255e-41263-622494-613-3635PREDICTED: THO complex subunit 1-like [Nelumbo nucifera]
gb|EYU26934.1|21033e-23145-3181-58+1611036e-36251-622461-595-3616hypothetical protein MIMGU_mgv1a003005mg [Erythranthe guttata]
ref|XP_010271740.1|5080.15e-15145-31834-91+1561122e-37167-622494-633-3638PREDICTED: THO complex subunit 1-like [Nelumbo nucifera]
ref|XP_006847924.1|5777.45e-14145-31836-93+1571104e-37242-622497-626-3667hypothetical protein AMTR_s00029p00122290 [Amborella trichopoda] gb|ERN09505.1| hypothetical protein AMTR_s00029p0012229
ref|XP_009385659.1|5280.17e-15145-31835-92+1591055e-36242-622497-614-3653PREDICTED: THO complex subunit 1 isoform X1 [Musa acuminata subsp. malaccensis]
ref|XP_009385660.1|5180.16e-15145-31835-92+1601056e-36242-622407-524-3563PREDICTED: THO complex subunit 1 isoform X2 [Musa acuminata subsp. malaccensis]
ref|XP_010933275.1|5379.78e-15145-31834-91+1671031e-35266-622494-604-3652PREDICTED: THO complex subunit 1 [Elaeis guineensis]
ref|XP_002871388.1|5976.69e-14145-3181-58+1581064e-36239-622462-581-3597hypothetical protein ARALYDRAFT_908935 [Arabidopsis lyrata subsp. lyrata] gb|EFH47647.1| hypothetical protein ARALYDRAF
ref|XP_010452987.1|5678.23e-14133-31820-81+1721027e-35239-622484-605-3621PREDICTED: THO complex subunit 1-like isoform X1 [Camelina sativa]
gb|AAN33204.1|6774.74e-13145-3181-58+1621058e-36239-622464-583-3599At5g09860/MYH9_7 [Arabidopsis thaliana]
ref|NP_001190269.1|6674.74e-13145-3181-58+1641059e-36239-622463-582-3598THO complex subunit 1 [Arabidopsis thaliana] gb|AED91457.1| THO complex subunit 1 [Arabidopsis thaliana]
dbj|BAB09407.1|6574.74e-13145-3181-58+1661051e-35239-622453-572-3588unnamed protein product [Arabidopsis thaliana]
ref|NP_568219.1|6874.75e-13145-3181-58+1631058e-36239-622464-583-3599THO complex subunit 1 [Arabidopsis thaliana] sp|Q93VM9.1|THOC1_ARATH RecName: Full=THO complex subunit 1; Short=AtTHO1;
ref|XP_006399469.1|5478.62e-14145-3181-58+1741012e-34239-622452-570-3586hypothetical protein EUTSA_v10013059mg [Eutrema salsugineum] gb|ESQ40922.1| hypothetical protein EUTSA_v10013059mg [Eutr
ref|XP_006399470.1|5578.62e-14145-3181-58+1761012e-34239-622453-571-3587hypothetical protein EUTSA_v10013059mg [Eutrema salsugineum] gb|ESQ40923.1| hypothetical protein EUTSA_v10013059mg [Eutr
ref|XP_010452988.1|5877.46e-14145-3181-58+1711026e-35239-622461-582-3598PREDICTED: THO complex subunit 1-like isoform X2 [Camelina sativa]
ref|XP_010491629.1|6176.31e-13145-3181-58+1731011e-34239-622465-586-3602PREDICTED: THO complex subunit 1 [Camelina sativa]
ref|XP_006287317.1|7174.36e-13145-3181-58+1691033e-35239-622462-581-3597hypothetical protein CARUB_v10000519mg [Capsella rubella] gb|EOA20215.1| hypothetical protein CARUB_v10000519mg [Capsell
ref|XP_006287318.1|7274.36e-13145-3181-58+1701033e-35239-622463-582-3598hypothetical protein CARUB_v10000519mg [Capsella rubella] gb|EOA20216.1| hypothetical protein CARUB_v10000519mg [Capsell
ref|XP_010422932.1|6076.31e-13145-3181-58+1751002e-34239-622464-585-3601PREDICTED: THO complex subunit 1-like isoform X2 [Camelina sativa]
ref|XP_010422931.1|7074.36e-13133-31820-81+1771003e-34239-622487-608-3624PREDICTED: THO complex subunit 1-like isoform X1 [Camelina sativa]
ref|XP_008797926.1|7469.72e-11145-31834-90+1651049e-36266-622493-603-3651PREDICTED: THO complex subunit 1 isoform X2 [Phoenix dactylifera]
ref|XP_007010829.1|21694e-56242-622431-561-3572Nuclear matrix protein-related isoform 2 [Theobroma cacao] gb|EOY19639.1| Nuclear matrix protein-related isoform 2 [Theo
ref|XP_007010830.1|31688e-56242-622316-446-3457Nuclear matrix protein-related isoform 3 [Theobroma cacao] ref|XP_007010832.1| Nuclear matrix protein-related isoform 3
ref|XP_011469469.1|1691.73e-19145-3181-58+18973.93e-24621-719428-460-2525PREDICTED: THO complex subunit 1 isoform X2 [Fragaria vesca subsp. vesca]
ref|XP_010327387.1|61655e-55167-622361-499-3508PREDICTED: THO complex subunit 1 isoform X2 [Solanum lycopersicum]
ref|XP_009771508.1|71656e-55167-622385-523-3533PREDICTED: THO complex subunit 1 isoform X2 [Nicotiana sylvestris]
ref|XP_010327384.1|81647e-55167-622397-535-3544PREDICTED: THO complex subunit 1 isoform X1 [Solanum lycopersicum]
emb|CDX85792.1|6475.14e-13121-31810-75+17988.25e-30239-622479-596-3612BnaA02g00210D [Brassica napus]
emb|CAN81713.1|491631e-42167-622525-655-3665hypothetical protein VITISV_038974 [Vitis vinifera]
emb|CDY40064.1|6974.75e-13142-31816-74+18087.86e-30239-622495-612-3628BnaC02g00660D [Brassica napus]
ref|XP_009125342.1|6276.31e-13145-3181-58+18285.14e-29239-622464-590-3606PREDICTED: THO complex subunit 1 isoform X2 [Brassica rapa]
ref|XP_009125341.1|6376.31e-13145-3181-58+18185.14e-29239-622465-591-3607PREDICTED: THO complex subunit 1 isoform X1 [Brassica rapa]
ref|XP_010659080.1|161612e-53167-622397-527-3537PREDICTED: THO complex subunit 1-like isoform X3 [Vitis vinifera]
gb|KJB75026.1|221599e-53167-622416-556-3566hypothetical protein B456_012G019300 [Gossypium raimondii]
ref|XP_009608816.1|241571e-52254-622385-511-3529PREDICTED: THO complex subunit 1 isoform X2 [Nicotiana tomentosiformis]
ref|XP_006649251.1|8167.81e-10145-31849-106+17886.34e-30248-622509-625-3644PREDICTED: THO complex subunit 1-like [Oryza brachyantha]
ref|XP_008240508.1|461548e-43242-62211-141-3159PREDICTED: THO complex subunit 1-like [Prunus mume]
gb|EPS68583.1|4481.61e-15148-3182-58+18872.04e-25621-719428-460-2510hypothetical protein M569_06184, partial [Genlisea aurea]
ref|XP_008360535.1|401522e-45242-62226-149-3168PREDICTED: THO complex subunit 1-like [Malus domestica]
emb|CAN77205.1|311492e-49167-622345-497-3507hypothetical protein VITISV_014783 [Vitis vinifera]
gb|AAN61477.1|8665.57e-10145-31849-106+18382.46e-29248-622521-637-3653Unknown protein [Oryza sativa Japonica Group]
gb|EEE58188.1|8565.96e-10151-31860-115+18582.08e-29248-622511-627-3643hypothetical protein OsJ_09127 [Oryza sativa Japonica Group]
ref|NP_001048715.1|8765.57e-10145-31849-106+18482.46e-29248-622506-622-3638Os03g0110400 [Oryza sativa Japonica Group] gb|ABF93587.1| THO complex subunit 1, putative, expressed [Oryza sativa Japon
ref|XP_008240536.1|1094.72e-20145-3181-58+110350.46e-04452PREDICTED: THO complex subunit 1, partial [Prunus mume]
ref|XP_003558999.1|8367.41e-10145-31844-101+18677.05e-27254-622502-615-3630PREDICTED: THO complex subunit 1 isoform X2 [Brachypodium distachyon]
ref|XP_010229325.1|8267.41e-10145-31844-101+18777.06e-27254-622510-623-3638PREDICTED: THO complex subunit 1 isoform X1 [Brachypodium distachyon]
ref|XP_004986033.1|7370.12e-11145-31844-101+19671.66e-11582-719472-519-2638PREDICTED: THO complex subunit 1-like [Setaria italica]
ref|NP_001159168.1|7968.67e-11145-31843-100+19771.66e-11582-719471-518-2638hypothetical protein [Zea mays] gb|ACN25299.1| unknown [Zea mays] tpg|DAA42878.1| TPA: hypothetical protein ZEAMMB73_799
ref|XP_008681264.1|7868.66e-11139-3187-66+19971.67e-11582-719437-484-2604PREDICTED: hypothetical protein isoform X1 [Zea mays] tpg|DAA42877.1| TPA: hypothetical protein ZEAMMB73_799316 [Zea may
ref|XP_002468664.1|8068.28e-11145-31843-100+19871.67e-11582-719471-518-2637hypothetical protein SORBIDRAFT_01g049910 [Sorghum bicolor] gb|EER95662.1| hypothetical protein SORBIDRAFT_01g049910 [So
ref|XP_004162641.1|4381.61e-15154-31814-68+110155.51e-05645-719439-463-2483PREDICTED: THO complex subunit 1-like [Cucumis sativus]
emb|CDP18815.1|391346e-46167-622317-453-3463unnamed protein product [Coffea canephora]
ref|XP_001753133.1|8465.95e-10145-31819-76+19567.04e-13621-719446-478-2566predicted protein [Physcomitrella patens] gb|EDQ82174.1| predicted protein [Physcomitrella patens]
gb|KHN12335.1|481291e-42167-622295-429-3439THO complex subunit 1 [Glycine soja]
ref|XP_010684231.1|501292e-42167-622338-476-3486PREDICTED: THO complex subunit 1 isoform X3 [Beta vulgaris subsp. vulgaris] ref|XP_010684233.1| PREDICTED: THO complex
gb|EMS55911.1|7668.95e-11145-31846-103+19352.41e-13627-719451-480-2593hypothetical protein TRIUR3_26611 [Triticum urartu]
gb|EMT12508.1|7768.95e-11145-31845-102+19452.41e-13627-719524-553-2666hypothetical protein F775_14078 [Aegilops tauschii]
gb|AFK47582.1|541195e-40167-62236-169-3179unknown [Lotus japonicus]
ref|XP_002992565.1|8850.48e-05148-31849-105+19160.52e-16621-719474-506-2583hypothetical protein SELMODRAFT_135550 [Selaginella moellendorffii] gb|EFJ06371.1| hypothetical protein SELMODRAFT_13555
ref|XP_002972508.1|8950.11e-049260.82e-16621-719474-506-2583hypothetical protein SELMODRAFT_96989 [Selaginella moellendorffii] gb|EFJ26594.1| hypothetical protein SELMODRAFT_96989
ref|XP_008797925.1|681041e-35266-622425-535-3583PREDICTED: THO complex subunit 1 isoform X1 [Phoenix dactylifera]
emb|CDP18816.1|198.63e-23148-31812-68+1158unnamed protein product [Coffea canephora]
gb|KDO38373.1|593.64e-22145-3181-58+185hypothetical protein CISIN_1g043208mg, partial [Citrus sinensis]
ref|XP_008391776.1|1292.87e-20145-3181-58+1423PREDICTED: THO complex subunit 1, partial [Malus domestica]
ref|XP_008367274.1|992.48e-21145-3181-58+1176PREDICTED: THO complex subunit 1-like [Malus domestica]
ref|XP_007010831.1|3287.85e-18145-3182-59+1423Nuclear matrix protein-related isoform 4, partial [Theobroma cacao] gb|EOY19641.1| Nuclear matrix protein-related isofo
gb|KDO44607.1|9084.72e-17248-4391-67-387hypothetical protein CISIN_1g040840mg, partial [Citrus sinensis]
emb|CAN77893.1|3883.28e-17139-315186-244+1327hypothetical protein VITISV_030448 [Vitis vinifera]
dbj|BAK02227.1|7568.64e-11145-31843-100+1470predicted protein [Hordeum vulgare subsp. vulgare]
emb|CBI35083.3|10058.51e-07167-37362-108-3118unnamed protein product [Vitis vinifera]
gb|KDO37418.1|10250.49e-05645-719108-132-2136hypothetical protein CISIN_1g032647mg [Citrus sinensis]
ref|XP_004155746.1|558146191PREDICTED: uncharacterized protein LOC101232578 [Cucumis sativus]