Clone JMSF003K05 [sequences]

contigF:003550 contigR:007021

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
emb\|CDO97975.1\|							1	290	3e-89	131-718	510-706	-3	706	unnamed protein product [Coffea canephora]
ref\|XP_006343037.1\|							2	284	4e-87	131-718	503-700	-3	700	PREDICTED: RNA polymerase II-associated factor 1 homolog [Solanum tuberosum]
ref\|XP_009608739.1\|							3	282	8e-87	131-718	459-656	-3	656	PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana tomentosiformis]
ref\|XP_009786773.1\|							4	282	8e-87	131-718	459-656	-3	656	PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana sylvestris]
ref\|XP_004235642.1\|							5	280	1e-85	131-718	501-698	-3	698	PREDICTED: RNA polymerase II-associated factor 1 homolog [Solanum lycopersicum]
emb\|CBI36059.3\|							6	249	7e-77	131-718	225-420	-3	420	unnamed protein product [Vitis vinifera]
ref\|XP_002278075.3\|							7	249	6e-74	131-718	507-702	-3	702	PREDICTED: RNA polymerase II-associated factor 1 homolog [Vitis vinifera]
ref\|XP_007135633.1\|							8	248	6e-74	131-718	467-661	-3	661	hypothetical protein PHAVU_010G145300g [Phaseolus vulgaris] gb\|ESW07627.1\| hypothetical protein PHAVU_010G145300g [Phase
ref\|XP_010256861.1\|							9	248	2e-73	131-718	537-734	-3	734	PREDICTED: RNA polymerase II-associated factor 1 homolog [Nelumbo nucifera] ref\|XP_010256862.1\| PREDICTED: RNA polymera
ref\|XP_010098144.1\|							11	246	5e-73	134-718	501-696	-3	697	hypothetical protein L484_026278 [Morus notabilis] gb\|EXB74581.1\| hypothetical protein L484_026278 [Morus notabilis]
ref\|XP_006583048.1\|							12	243	7e-72	131-718	465-659	-3	659	PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1 [Glycine max] ref\|XP_006583049.1\| PREDICTED: RNA po
gb\|KHN39254.1\|							10	242	3e-73	131-718	288-482	-3	482	RNA polymerase II-associated factor 1 like [Glycine soja]
ref\|XP_004155995.1\|							17	239	5e-70	131-718	518-706	-3	706	PREDICTED: uncharacterized LOC101203806 [Cucumis sativus]
ref\|XP_007024308.1\|							15	238	1e-70	131-718	366-562	-3	562	Hydroxyproline-rich glycoprotein family protein isoform 2 [Theobroma cacao] gb\|EOY26930.1\| Hydroxyproline-rich glycopro
ref\|XP_003531647.1\|							16	238	5e-70	131-718	472-666	-3	666	PREDICTED: bromodomain-containing protein 4-like isoform X1 [Glycine max] ref\|XP_006585570.1\| PREDICTED: bromodomain-co
ref\|XP_007024309.1\|							18	238	5e-70	131-718	466-662	-3	662	Hydroxyproline-rich glycoprotein family protein isoform 3 [Theobroma cacao] gb\|EOY26931.1\| Hydroxyproline-rich glycopro
gb\|KJB35043.1\|							19	238	8e-70	131-718	480-676	-3	676	hypothetical protein B456_006G096900 [Gossypium raimondii] gb\|KJB35044.1\| hypothetical protein B456_006G096900 [Gossypiu
ref\|XP_007024307.1\|							20	238	9e-70	131-718	489-685	-3	685	Hydroxyproline-rich glycoprotein family protein isoform 1 [Theobroma cacao] gb\|EOY26929.1\| Hydroxyproline-rich glycopro
gb\|KHN05332.1\|							14	237	2e-71	131-718	287-481	-3	481	RNA polymerase II-associated factor 1 like [Glycine soja]
ref\|XP_008462415.1\|							23	236	4e-69	131-718	516-705	-3	705	PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog [Cucumis melo]
ref\|XP_006465693.1\|							22	234	2e-69	131-718	380-570	-3	570	PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X2 [Citrus sinensis]
gb\|KDO51788.1\|							25	234	1e-68	131-718	481-671	-3	671	hypothetical protein CISIN_1g005794mg [Citrus sinensis]
ref\|XP_006465692.1\|							24	233	9e-69	131-718	380-576	-3	576	PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1 [Citrus sinensis]
ref\|XP_006426877.1\|							26	233	4e-68	131-718	481-677	-3	677	hypothetical protein CICLE_v10025066mg [Citrus clementina] gb\|ESR40117.1\| hypothetical protein CICLE_v10025066mg [Citrus
gb\|AET01517.2\|							28	230	5e-67	131-718	468-660	-3	660	Paf1 complex component [Medicago truncatula]
ref\|XP_003627043.1\|							13	229	1e-71	131-718	23-215	-3	215	hypothetical protein MTR_8g014480 [Medicago truncatula]
ref\|XP_002887861.1\|							27	229	2e-67	149-718	380-569	-3	576	hypothetical protein ARALYDRAFT_477298 [Arabidopsis lyrata subsp. lyrata] gb\|EFH64120.1\| hypothetical protein ARALYDRAF
ref\|XP_004510311.1\|							30	229	1e-66	152-718	466-651	-3	657	PREDICTED: RNA polymerase II-associated factor 1 homolog [Cicer arietinum]
ref\|XP_011080439.1\|							31	229	2e-66	131-718	503-698	-3	698	PREDICTED: RNA polymerase II-associated factor 1 homolog [Sesamum indicum]
ref\|XP_008228451.1\|							32	228	4e-66	131-718	464-658	-3	658	PREDICTED: bromodomain-containing protein 4 [Prunus mume]
ref\|XP_007217663.1\|							37	228	8e-66	131-718	515-709	-3	709	hypothetical protein PRUPE_ppa002145mg [Prunus persica] gb\|EMJ18862.1\| hypothetical protein PRUPE_ppa002145mg [Prunus pe
ref\|XP_010548643.1\|							29	227	9e-67	146-718	371-559	-3	565	PREDICTED: RNA polymerase II-associated factor 1 homolog [Tarenaya hassleriana]
ref\|XP_007225143.1\|							34	227	5e-66	131-718	474-668	-3	668	hypothetical protein PRUPE_ppa002485mg [Prunus persica] gb\|EMJ26342.1\| hypothetical protein PRUPE_ppa002485mg [Prunus pe
ref\|XP_008222683.1\|							36	227	7e-66	131-718	490-684	-3	684	PREDICTED: RNA polymerase II-associated factor 1 homolog [Prunus mume]
ref\|XP_010417804.1\|							33	226	5e-66	200-718	392-561	-3	585	PREDICTED: RNA polymerase II-associated factor 1 homolog [Camelina sativa]
ref\|XP_004302858.1\|							39	226	2e-65	131-718	499-693	-3	693	PREDICTED: RNA polymerase II-associated factor 1 homolog [Fragaria vesca subsp. vesca]
gb\|KHF99389.1\|							42	226	3e-65	131-718	481-673	-3	673	RNA polymerase II-associated factor 1 [Gossypium arboreum]
ref\|XP_002303312.2\|							35	225	5e-66	131-718	375-569	-3	569	hydroxyproline-rich glycoprotein [Populus trichocarpa] gb\|EEE78291.2\| hydroxyproline-rich glycoprotein [Populus trichoca
ref\|XP_008796955.1\|							38	225	1e-65	146-718	386-579	-3	583	PREDICTED: RNA polymerase II-associated factor 1 homolog [Phoenix dactylifera]
ref\|XP_010473041.1\|							40	224	2e-65	200-718	391-560	-3	584	PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X2 [Camelina sativa]
ref\|XP_010473040.1\|							41	224	3e-65	200-718	397-566	-3	590	PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1 [Camelina sativa]
ref\|XP_006426878.1\|							44	223	2e-64	269-718	481-630	-3	632	hypothetical protein CICLE_v10025066mg [Citrus clementina] gb\|ESR40118.1\| hypothetical protein CICLE_v10025066mg [Citrus
ref\|XP_008367453.1\|							45	223	4e-64	131-718	516-710	-3	710	PREDICTED: RNA polymerase II-associated factor 1 homolog [Malus domestica]
ref\|XP_010510890.1\|							43	222	1e-64	200-718	391-560	-3	585	PREDICTED: RNA polymerase II-associated factor 1 homolog [Camelina sativa]
gb\|KJB18584.1\|							46	222	7e-64	164-718	479-667	-3	671	hypothetical protein B456_003G061700 [Gossypium raimondii]
ref\|XP_009342534.1\|							47	222	8e-64	131-718	516-710	-3	710	PREDICTED: RNA polymerase II-associated factor 1 homolog [Pyrus x bretschneideri]
ref\|XP_008348493.1\|							48	222	9e-64	131-718	515-709	-3	709	PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog [Malus domestica]
ref\|XP_009353546.1\|							49	221	1e-63	131-718	516-710	-3	710	PREDICTED: RNA polymerase II-associated factor 1 homolog [Pyrus x bretschneideri]
ref\|XP_010934933.1\|							52	215	2e-61	269-718	536-685	-3	692	PREDICTED: LOW QUALITY PROTEIN: SH3 domain-containing protein C23A1.17-like [Elaeis guineensis]
gb\|KDP40860.1\|							50	214	2e-62	131-718	320-515	-3	515	hypothetical protein JCGZ_24859 [Jatropha curcas]
ref\|XP_002515964.1\|							53	214	3e-61	131-718	476-672	-3	672	conserved hypothetical protein [Ricinus communis] gb\|EEF46384.1\| conserved hypothetical protein [Ricinus communis]
gb\|KJB18585.1\|							54	214	3e-61	275-718	479-626	-3	646	hypothetical protein B456_003G061700 [Gossypium raimondii]
ref\|XP_010941164.1\|							55	213	2e-60	131-718	535-732	-3	732	PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4-like [Elaeis guineensis]
ref\|XP_006389738.1\|							51	212	4e-62	200-718	245-417	-3	443	hypothetical protein EUTSA_v10018561mg [Eutrema salsugineum] gb\|ESQ27024.1\| hypothetical protein EUTSA_v10018561mg [Eutr
ref\|XP_008794837.1\|							56	211	4e-60	260-718	507-659	-3	663	PREDICTED: bromodomain-containing protein 4-like [Phoenix dactylifera]
ref\|XP_011008105.1\|							57	211	5e-60	131-718	477-672	-3	672	PREDICTED: RNA polymerase II-associated factor 1 homolog [Populus euphratica]
gb\|KFK42379.1\|							59	210	2e-58	149-718	880-1067	-3	1075	hypothetical protein AALP_AA2G248600 [Arabis alpina]
ref\|XP_009391055.1\|							60	207	2e-58	131-718	533-730	-3	730	PREDICTED: RNA polymerase II-associated factor 1 homolog [Musa acuminata subsp. malaccensis]
ref\|XP_002298244.2\|							61	206	3e-58	131-718	494-689	-3	689	hydroxyproline-rich glycoprotein [Populus trichocarpa] gb\|EEE83049.2\| hydroxyproline-rich glycoprotein [Populus trichoca
gb\|EYU45831.1\|							58	204	2e-59	146-718	206-390	-3	396	hypothetical protein MIMGU_mgv1a007756mg [Erythranthe guttata]
ref\|NP_178091.2\|							62	204	6e-58	149-718	394-582	-3	589	protein early flowering 7 [Arabidopsis thaliana] gb\|AEE36292.1\| protein early flowering 7 [Arabidopsis thaliana]
gb\|AAM10397.1\|							63	204	7e-58	149-718	394-582	-3	589	At1g79730/F19K16_29 [Arabidopsis thaliana] gb\|AAO11627.1\| At1g79730/F19K16_29 [Arabidopsis thaliana]
emb\|CDY10443.1\|							66	198	1e-55	200-718	382-554	-3	578	BnaCnng03440D [Brassica napus]
ref\|XP_009122771.1\|							67	198	1e-55	200-718	380-552	-3	576	PREDICTED: RNA polymerase II-associated factor 1 homolog [Brassica rapa]
emb\|CDY40363.1\|							68	197	2e-55	200-718	381-553	-3	577	BnaA10g27050D [Brassica napus]
ref\|XP_011015860.1\|							65	194	4e-56	314-718	223-357	-3	359	PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog, partial [Populus euphratica]
ref\|NP_001061029.1\|							69	192	1e-54	143-718	263-449	-3	451	Os08g0157100 [Oryza sativa Japonica Group] dbj\|BAC99509.1\| proline-rich protein-like [Oryza sativa Japonica Group] dbj\|B
gb\|EEE68075.1\|							72	192	8e-54	143-718	357-543	-3	545	hypothetical protein OsJ_26103 [Oryza sativa Japonica Group]
gb\|EEC82925.1\|							73	192	2e-53	143-718	445-631	-3	633	hypothetical protein OsI_27878 [Oryza sativa Indica Group]
ref\|XP_006659135.1\|							71	191	7e-54	143-718	263-449	-3	451	PREDICTED: RNA polymerase II-associated factor 1 homolog [Oryza brachyantha]
gb\|AFK35982.1\|							64	189	2e-56	206-634	1-141	-3	163	unknown [Lotus japonicus]
ref\|XP_006829032.1\|							75	189	8e-52	146-718	488-685	-3	689	hypothetical protein AMTR_s00001p00252660 [Amborella trichopoda] gb\|ERM96448.1\| hypothetical protein AMTR_s00001p0025266
emb\|CBI75547.1\|							74	187	1e-52	140-718	266-453	-3	453	Paf1 domain containing protein, expressed [Triticum aestivum] emb\|CDM80198.1\| unnamed protein product [Triticum aestivum
ref\|XP_003573471.1\|							76	187	1e-51	131-718	427-614	-3	614	PREDICTED: RNA polymerase II-associated factor 1 homolog [Brachypodium distachyon]
dbj\|BAK06278.1\|							77	187	2e-51	131-718	429-617	-3	617	predicted protein [Hordeum vulgare subsp. vulgare]
ref\|XP_008661635.1\|							78	186	4e-51	143-718	434-621	-3	623	PREDICTED: uncharacterized protein LOC100273854 isoform X1 [Zea mays]
ref\|NP_001141723.1\|							70	184	6e-54	143-718	25-212	-3	214	uncharacterized protein LOC100273854 [Zea mays] gb\|ACF86934.1\| unknown [Zea mays] gb\|AFW57301.1\| hypothetical protein ZE
dbj\|BAJ92943.1\|							80	184	3e-50	200-718	440-606	-3	627	predicted protein [Hordeum vulgare subsp. vulgare]
dbj\|BAJ94696.1\|							81	184	4e-50	200-718	440-606	-3	627	predicted protein [Hordeum vulgare subsp. vulgare] dbj\|BAK01232.1\| predicted protein [Hordeum vulgare subsp. vulgare]
ref\|XP_008677077.1\|							79	183	6e-51	314-718	265-400	-3	453	PREDICTED: hypothetical protein isoform X1 [Zea mays] gb\|AFW61197.1\| hypothetical protein ZEAMMB73_933462 [Zea mays]
gb\|AAF68118.1\|AC010793_13							83	182	1e-49	149-718	400-586	-3	593	F20B17.16 [Arabidopsis thaliana]
ref\|XP_004972802.1\|							82	181	5e-50	143-718	264-450	-3	452	PREDICTED: RNA polymerase II-associated factor 1 homolog [Setaria italica]
ref\|XP_010062533.1\|							86	180	2e-48	131-718	522-720	-3	720	PREDICTED: dynactin, 150 kDa isoform [Eucalyptus grandis] gb\|KCW69680.1\| hypothetical protein EUGRSUZ_F03078 [Eucalyptus
gb\|EMS59209.1\|							84	175	3e-49	293-718	148-294	-3	318	hypothetical protein TRIUR3_01010 [Triticum urartu]
gb\|EMT13177.1\|							85	175	1e-48	314-718	240-376	-3	395	hypothetical protein F775_10350 [Aegilops tauschii]
gb\|EMS49068.1\|							87	174	5e-47	215-718	300-490	-3	557	hypothetical protein TRIUR3_29381 [Triticum urartu]
ref\|XP_010665896.1\|							88	172	5e-46	206-718	503-672	-3	700	PREDICTED: RNA polymerase II-associated factor 1 homolog [Beta vulgaris subsp. vulgaris]
ref\|XP_002445079.1\|							89	169	7e-45	143-718	452-638	-3	640	hypothetical protein SORBIDRAFT_07g003820 [Sorghum bicolor] gb\|EES14574.1\| hypothetical protein SORBIDRAFT_07g003820 [So
ref\|XP_006300363.1\|							91	148	3e-38	149-667	260-403	-3	410	hypothetical protein CARUB_v10022183mg [Capsella rubella] gb\|EOA33261.1\| hypothetical protein CARUB_v10022183mg [Capsell
ref\|XP_008380883.1\|							92	148	1e-37	131-556	497-637	-3	637	PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 1.1 [Malus domestica]
ref\|NP_001145766.1\|							93	134	9e-35	407-718	91-195	-3	202	hypothetical protein [Zea mays] gb\|ACL52549.1\| unknown [Zea mays] gb\|AFW61198.1\| hypothetical protein ZEAMMB73_933462 [Z
ref\|XP_002969835.1\|							95	126	8e-30	305-718	398-529	-3	599	hypothetical protein SELMODRAFT_441016 [Selaginella moellendorffii] gb\|EFJ28959.1\| hypothetical protein SELMODRAFT_44101
ref\|XP_002985172.1\|							96	126	9e-30	305-718	400-531	-3	601	hypothetical protein SELMODRAFT_446192 [Selaginella moellendorffii] gb\|EFJ13666.1\| hypothetical protein SELMODRAFT_44619
gb\|AAG52243.1\|AC011717_11							97	123	6e-29	413-718	400-500	-3	547	unknown protein; 100211-103437 [Arabidopsis thaliana]
ref\|XP_011011446.1\|							94	122	1e-30	482-718	82-160	-3	165	PREDICTED: RNA polymerase II-associated factor 1 homolog [Populus euphratica]
ref\|XP_001759615.1\|							99	97.1	2e-19	221-718	415-558	-3	588	Paf1 complex protein [Physcomitrella patens] gb\|EDQ75527.1\| Paf1 complex protein [Physcomitrella patens]
ref\|XP_006343038.1\|							101	75.1	1e-12	266-718	209-303	-3	308	PREDICTED: zinc finger CCCH domain-containing protein 4-like [Solanum tuberosum]
ref\|XP_007515630.1\|							102	63.2	3e-08	359-718	235-359	-3	389	predicted protein [Bathycoccus prasinos] emb\|CCO14509.1\| predicted protein [Bathycoccus prasinos]
gb\|EPS73458.1\|							103	62.8	4e-08	551-718	413-468	-3	470	hypothetical protein M569_01298, partial [Genlisea aurea]
ref\|XP_005650500.1\|							104	62.4	6e-08	302-718	222-360	-3	385	hypothetical protein COCSUDRAFT_64915 [Coccomyxa subellipsoidea C-169] gb\|EIE25956.1\| hypothetical protein COCSUDRAFT_6
ref\|XP_011400472.1\|							105	54.3	3e-05				387	RNA polymerase II-associated factor 1-like protein [Auxenochlorella protothecoides] gb\|KFM27495.1\| RNA polymerase II-as
ref\|XP_010262891.1\|							100	8	79.7				279	PREDICTED: uncharacterized protein LOC104601298 [Nelumbo nucifera]
ref\|XP_004141783.1\|							21	6	238				706	PREDICTED: uncharacterized protein LOC101203806 [Cucumis sativus] gb\|KGN45581.1\| hypothetical protein Csa_7G452360 [Cucu
ref\|XP_011011447.1\|							98	4	99.4				122	PREDICTED: uncharacterized protein LOC105116014 [Populus euphratica]
ref\|XP_010510889.1\|							90	3	152				147	PREDICTED: uncharacterized protein LOC104787083 [Camelina sativa]