Clone JMSF002K21 [sequences]

contigF:000680 contigR:011236
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_009785778.1|11726e-5050-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylvestris]
ref|XP_009605052.1|21716e-5050-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana tomentosiformis]
ref|XP_004238992.1|31703e-4950-3131-88+2319PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum lycopersicum]
ref|XP_002518700.1|41703e-4950-3131-88+2318DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gb|EEF43625.1| DNA-directed RNA polymerase II subuni
ref|XP_006422955.1|51703e-4950-3131-88+2319hypothetical protein CICLE_v10028849mg [Citrus clementina] ref|XP_006487022.1| PREDICTED: DNA-directed RNA polymerases I
emb|CAN60923.1|61695e-4950-3131-88+2318hypothetical protein VITISV_019338 [Vitis vinifera]
ref|XP_007042502.1|71696e-4950-3131-88+2318DNA-directed RNA polymerase family protein [Theobroma cacao] gb|EOX98333.1| DNA-directed RNA polymerase family protein [
ref|XP_011092547.1|81697e-4950-3131-88+2319PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Sesamum indicum]
ref|XP_004138895.1|91699e-4950-3131-88+2320PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cucumis sativus] gb|KGN61343.1| hypothetical protein Csa
ref|XP_008441761.1|101699e-4950-3131-88+2320PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo]
ref|XP_010107867.1|291696e-4750-3131-88+2588DNA-directed RNA polymerase II subunit [Morus notabilis] gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus no
ref|XP_006348609.1|111681e-4850-3131-88+2319PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum tuberosum]
ref|XP_002285322.1|121681e-4850-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis vinifera] ref|XP_010647901.1| PREDICTED: DNA-dire
gb|KHG04309.1|131673e-4850-3131-88+2318DNA-directed RNA polymerase II subunit RPB3-A -like protein [Gossypium arboreum] gb|KJB47376.1| hypothetical protein B4
gb|KHG20623.1|141665e-4850-3131-88+2318DNA-directed RNA polymerase II subunit RPB3-A -like protein [Gossypium arboreum]
gb|KJB77656.1|151666e-4850-3131-88+2318hypothetical protein B456_012G149200 [Gossypium raimondii]
ref|XP_004505300.1|161661e-4750-3131-88+2319PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer arietinum]
ref|XP_010275045.1|171661e-4750-3131-88+2321PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Nelumbo nucifera]
ref|XP_007201816.1|181661e-4750-3131-88+2318hypothetical protein PRUPE_ppa008812mg [Prunus persica] gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe
gb|AFK41039.1|191651e-4750-3131-88+2318unknown [Medicago truncatula]
ref|XP_003607895.1|201652e-4750-3131-88+2318DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] gb|ABC75365.1| RNA polymerase, dimerisation [Medicag
ref|XP_007157771.1|211652e-4750-3131-88+2318hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris] gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phase
ref|XP_008236569.1|221643e-4750-3131-88+2318PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Prunus mume]
emb|CDO97209.1|231643e-4750-3131-88+2319unnamed protein product [Coffea canephora]
ref|XP_010518168.1|241644e-4750-3131-88+2319PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Camelina sativa]
ref|XP_008367672.1|251644e-4750-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Malus domestica]
ref|XP_002313865.2|261645e-4750-3131-88+2323DNA-directed RNA polymerase II 36 kDa polypeptide B family protein [Populus trichocarpa] gb|EEE87820.2| DNA-directed RN
ref|XP_011000984.1|271645e-4750-3131-88+2323PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Populus euphratica] ref|XP_011000991.1| PREDICTED:
ref|XP_008373098.1|281645e-4750-3131-88+2318PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Malus domestica]
ref|XP_010691712.1|301647e-4750-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Beta vulgaris subsp. vulgaris] ref|XP_010691713.1| PRED
ref|XP_004304034.1|311647e-4750-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Fragaria vesca subsp. vesca]
ref|NP_179145.1|321639e-4750-3131-88+2319DNA-directed RNA polymerase II subunit RPB3-A [Arabidopsis thaliana] sp|Q39211.1|NRPB3_ARATH RecName: Full=DNA-directed
ref|XP_009335010.1|331631e-4650-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Pyrus x bretschneideri]
gb|KDP47129.1|341631e-4650-3131-88+2317hypothetical protein JCGZ_22125 [Jatropha curcas]
ref|XP_010488959.1|351631e-4650-3131-88+2319PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Camelina sativa]
ref|XP_010241296.1|361631e-4650-3131-88+2321PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Nelumbo nucifera]
ref|XP_010467299.1|371631e-4650-3131-88+2319PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Camelina sativa]
emb|CDX71219.1|381622e-4656-3134-89+2282BnaC07g04980D [Brassica napus]
ref|XP_006298158.1|391622e-4650-3131-88+2319hypothetical protein CARUB_v10014208mg [Capsella rubella] gb|EOA31056.1| hypothetical protein CARUB_v10014208mg [Capsell
ref|XP_009119413.1|401622e-4656-3134-89+2319PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Brassica rapa] emb|CDY36631.1| BnaA07g04260D [Brassica
emb|CDY62312.1|411623e-4656-3134-89+2318BnaCnng39910D [Brassica napus]
ref|XP_006853170.1|421623e-4650-3131-88+2324hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda] gb|ERN14637.1| hypothetical protein AMTR_s00038p0019405
gb|EPS71627.1|431623e-4650-3131-88+2320hypothetical protein M569_03132 [Genlisea aurea]
ref|XP_010065975.1|441624e-4656-3136-91+2321PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Eucalyptus grandis] gb|KCW63722.1| hypothetical pr
emb|CDY37227.1|451624e-4656-3134-89+2321BnaA09g08480D [Brassica napus]
emb|CDX71220.1|531623e-4556-3134-89+2444BnaC07g04990D [Brassica napus]
ref|XP_010526970.1|461616e-4650-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Tarenaya hassleriana]
ref|XP_009350515.1|471616e-4650-3131-88+2318PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Pyrus x bretschneideri]
ref|XP_002883895.1|481616e-4650-3131-88+2319RBP36A [Arabidopsis lyrata subsp. lyrata] gb|EFH60154.1| RBP36A [Arabidopsis lyrata subsp. lyrata]
gb|KFK40018.1|491617e-4656-3134-89+2320hypothetical protein AALP_AA3G319300 [Arabis alpina]
ref|XP_009123235.1|501618e-4656-3134-89+2321PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Brassica rapa]
gb|AAM65319.1|511602e-4550-3131-88+2319DNA-directed RNA polymerase II, third largest subunit [Arabidopsis thaliana]
gb|AIA09926.1|521593e-4556-3134-89+2317RNA polymerase II [Quercus suber]
ref|XP_003529425.1|551595e-4556-3134-89+2319PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Glycine max] gb|KHN42991.1| DNA-directed RNA polymerase
ref|XP_003556247.1|561596e-4556-3134-89+2320PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Glycine max] gb|KHN08054.1| DNA-directed RNA polym
ref|XP_006409557.1|571591e-445-31336-138+2369hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum] gb|ESQ51010.1| hypothetical protein EUTSA_v10022739mg [Eutr
ref|XP_006393120.1|581581e-4456-3134-89+2320hypothetical protein EUTSA_v10011661mg [Eutrema salsugineum] gb|ESQ30406.1| hypothetical protein EUTSA_v10011661mg [Eutr
ref|XP_006660419.1|591573e-4456-3137-92+2330PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Oryza brachyantha]
gb|EMS66673.1|601564e-4456-3137-92+2305DNA-directed RNA polymerase II subunit RPB3-A [Triticum urartu]
ref|XP_004956290.1|611564e-4456-3137-92+2325PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Setaria italica]
ref|XP_003576823.1|631567e-4456-3137-92+2330PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Brachypodium distachyon]
ref|NP_001062572.1|641569e-4456-3137-92+2330Os09g0110400 [Oryza sativa Japonica Group] dbj|BAD17541.1| putative DNA-directed RNA polymerase II [Oryza sativa Japonic
tpg|DAA39561.1|621555e-4456-3136-91+2260TPA: hypothetical protein ZEAMMB73_135001 [Zea mays]
ref|XP_002462055.1|651551e-4356-3136-91+2328hypothetical protein SORBIDRAFT_02g014460 [Sorghum bicolor] gb|EER98576.1| hypothetical protein SORBIDRAFT_02g014460 [So
ref|NP_001149261.1|661551e-4356-3136-91+2328LOC100282883 [Zea mays] gb|ACG34756.1| DNA-directed RNA polymerase II 36 kDa polypeptide A [Zea mays] gb|ACN31311.1| unk
ref|XP_009418294.1|671552e-4362-31315-98+2330PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Musa acuminata subsp. malaccensis]
ref|XP_010943195.1|681539e-4353-3133-89+2323PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Elaeis guineensis]
gb|ADE77570.1|691521e-4259-3139-93+2330unknown [Picea sitchensis]
ref|XP_002883894.1|701522e-4250-3131-88+2319RBP36A [Arabidopsis lyrata subsp. lyrata] gb|EFH60153.1| RBP36A [Arabidopsis lyrata subsp. lyrata]
ref|XP_002983424.1|711523e-4259-3133-87+2320hypothetical protein SELMODRAFT_180179 [Selaginella moellendorffii] gb|EFJ15766.1| hypothetical protein SELMODRAFT_18017
ref|XP_002960614.1|721523e-4259-3133-87+2320hypothetical protein SELMODRAFT_75337 [Selaginella moellendorffii] gb|EFJ38153.1| hypothetical protein SELMODRAFT_75337
gb|EMS46394.1|731494e-4156-3137-93+2315DNA-directed RNA polymerase II subunit RPB3-A [Triticum urartu]
ref|XP_001765827.1|741486e-4150-3131-88+2324predicted protein [Physcomitrella patens] gb|EDQ69418.1| predicted protein [Physcomitrella patens]
ref|NP_001077894.1|751443e-4050-3131-88+2235DNA-directed RNA polymerase II subunit RPB3-B [Arabidopsis thaliana] gb|AEC06398.1| DNA-directed RNA polymerase II subun
gb|AAB03740.1|761442e-3950-3131-88+2319RNA polymerase II third largest subunit [Arabidopsis thaliana]
ref|NP_179142.1|771442e-3950-3131-88+2319DNA-directed RNA polymerase II subunit RPB3-B [Arabidopsis thaliana] sp|Q39212.2|RPD3B_ARATH RecName: Full=DNA-directed
ref|XP_007199459.1|781293e-3453-3137-83+2253hypothetical protein PRUPE_ppa026986mg [Prunus persica] gb|EMJ00658.1| hypothetical protein PRUPE_ppa026986mg [Prunus pe
ref|XP_007200659.1|791245e-3250-3101-76+2290hypothetical protein PRUPE_ppa016873mg [Prunus persica] gb|EMJ01858.1| hypothetical protein PRUPE_ppa016873mg [Prunus pe
ref|XP_005643055.1|821144e-2871-3049-86+2303DNA-directed RNA polymerase II, 36 kDa polypeptide [Coccomyxa subellipsoidea C-169] gb|EIE18511.1| DNA-directed RNA pol
ref|XP_005855278.1|801127e-2971-2835-75+2121DNA-directed RNA polymerase II subunit RPB3, partial [Nannochloropsis gaditana CCMP526] gb|EKU21079.1| DNA-directed RNA
ref|XP_009514985.1|831129e-2865-2953-79+2242hypothetical protein PHYSODRAFT_554134 [Phytophthora sojae] gb|EGZ27710.1| hypothetical protein PHYSODRAFT_554134 [Phyto
ref|XP_008869633.1|851122e-2768-2954-79+2321hypothetical protein H310_06366 [Aphanomyces invadans] gb|ETW01785.1| hypothetical protein H310_06366 [Aphanomyces invad
ref|XP_009839409.1|881124e-2771-2955-79+2321hypothetical protein H257_13554 [Aphanomyces astaci] gb|ETV71163.1| hypothetical protein H257_13554 [Aphanomyces astaci]
gb|EWM29509.1|811111e-2871-2835-75+2121rna polymerase ii core subunit [Nannochloropsis gaditana]
dbj|GAM20367.1|841111e-2747-3131-88+2227hypothetical protein SAMD00019534_035420, partial [Acytostelium subglobosum LB1]
ref|XP_008612909.1|891116e-2765-2773-73+2321RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Saprolegnia diclina VS20] gb|EQC33686.1| RNA polymera
gb|KDO29260.1|901116e-2765-2773-73+2321RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein [Saprolegnia parasitica CBS 223.65]
ref|XP_008907224.1|911117e-2765-2953-79+2319hypothetical protein PPTG_13362 [Phytophthora parasitica INRA-310] gb|ETI44008.1| hypothetical protein F443_11228 [Phyto
ref|XP_008907225.1|861102e-2765-2953-79+2240hypothetical protein, variant [Phytophthora parasitica INRA-310] gb|ETI44009.1| hypothetical protein, variant [Phytophth
ref|XP_002997739.1|871102e-2765-2953-79+2241DNA-directed RNA polymerase II 36 kDa polypeptide A [Phytophthora infestans T30-4] gb|EEY68040.1| DNA-directed RNA poly
gb|ACO12911.1|921101e-2665-3133-86+2279DNA-directed RNA polymerase II subunit RPB3 [Lepeophtheirus salmonis]
ref|XP_001702786.1|941092e-2671-30411-88+2275DNA-directed RNA polymerase II, 36 kDa polypeptide [Chlamydomonas reinhardtii] gb|EDP06565.1| DNA-directed RNA polymera
gb|KFH73292.1|951092e-2677-3139-87+2282RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Mortierella verticillata NRRL 6337]
emb|CCA16494.1|971093e-2671-2775-73+2319DNAdirected RNA polymerase II 36 kDa polypeptide A putative [Albugo laibachii Nc14]
emb|CCI41220.1|981093e-2671-2775-73+2319unnamed protein product [Albugo candida]
gb|EIE89120.1|931081e-2656-3134-90+2201RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus delemar RA 99-880]
ref|XP_004355278.1|991084e-2671-3137-87+2296RNA polymerase II core subunit [Dictyostelium fasciculatum] gb|EGG16804.1| RNA polymerase II core subunit [Dictyostelium
ref|XP_001767451.1|1011086e-2656-30717-102+2385predicted protein [Physcomitrella patens] gb|EDQ67775.1| predicted protein [Physcomitrella patens]
emb|CEG69748.1|1021071e-2556-3134-90+2280Putative RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus microsporus]
ref|XP_005848659.1|1031071e-2550-3041-85+2283hypothetical protein CHLNCDRAFT_144215 [Chlorella variabilis] gb|EFN56557.1| hypothetical protein CHLNCDRAFT_144215 [Chl
gb|EFA85790.1|1041063e-2571-3137-87+2295RNA polymerase II core subunit [Polysphondylium pallidum PN500]
ref|XP_004213207.1|961052e-2665-3133-86+2131PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like, partial [Hydra vulgaris]
ref|XP_002158521.1|1051054e-2565-3133-86+2273PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Hydra vulgaris]
ref|XP_002504237.1|1061056e-2553-3075-89+2331dna-directed RNA polymerase II polypeptide a [Micromonas sp. RCC299] gb|ACO65495.1| dna-directed RNA polymerase II poly
ref|XP_011397782.1|1071058e-2577-30412-87+2313DNA-directed RNA polymerases II, IV and V subunit 3 [Auxenochlorella protothecoides] gb|KFM24894.1| DNA-directed RNA po
ref|XP_003867217.1|1101051e-2477-3137-85+2317RNA polymerase II subunit B44 [Candida orthopsilosis Co 90-125] emb|CCG21779.1| RNA polymerase II subunit B44 [Candida o
gb|KDD72188.1|1001045e-2659-3047-88+2121hypothetical protein H632_c3726p0, partial [Helicosporidium sp. ATCC 50920]
ref|XP_002741050.1|1081048e-2565-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Saccoglossus kowalevskii]
ref|XP_011418634.1|1091041e-2465-3133-86+2273PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Crassostrea gigas]
ref|XP_004997943.1|1111032e-2459-3132-86+2271DNA-directed RNA polymerase II subunit RPB3 [Salpingoeca rosetta] gb|EGD78987.1| DNA-directed RNA polymerase II subunit
ref|XP_005102061.1|1131033e-2465-3133-86+2280PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Aplysia californica]
ref|XP_002181139.1|1141033e-2465-3103-84+2320predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gb|EEC47062.1| predicted protein [Phaeodactylum tricornutum CC
ref|XP_956964.1|1151033e-2477-31316-94+2337DNA-directed RNA polymerase II polypeptide [Neurospora crassa OR74A] ref|XP_009851939.1| hypothetical protein NEUTE1DRA
emb|CEJ02675.1|1171033e-2456-2834-80+2272Putative RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus microsporus] emb|CEI98448.1| Putati
gb|ETN76674.1|1191034e-2465-3133-86+2288RNA polymerase Rpb3/Rpb11 dimerization domain protein [Necator americanus]
gb|KHC52600.1|1201034e-2438-31335-125+2356DNA-directed RNA polymerase II subunit RPB3, partial [Candida albicans P37039]
ref|XP_001909748.1|1271037e-2477-31316-94+2334hypothetical protein [Podospora anserina S mat+] emb|CAP70881.1| unnamed protein product [Podospora anserina S mat+] emb
ref|XP_001895623.1|1211025e-2465-3133-86+2275DNA-directed RNA polymerase II 33 kDa polypeptide [Brugia malayi] emb|CDQ03112.1| Protein Bm2624 [Brugia malayi]
gb|EYC32185.1|1231026e-2465-3133-86+2288hypothetical protein Y032_0003g1449 [Ancylostoma ceylanicum]
ref|XP_002415909.1|1241026e-2465-3133-86+2274RNA polymerase II, subunit POLR2C/RPB3, putative [Ixodes scapularis] gb|EEC19576.1| RNA polymerase II, subunit POLR2C/RP
gb|KFM80578.1|1251026e-2465-3133-86+2274DNA-directed RNA polymerase II subunit RPB3, partial [Stegodyphus mimosarum]
gb|KIH62572.1|1261026e-2465-3133-86+2288RNA polymerase Rpb3/Rpb11 dimerization domain protein [Ancylostoma duodenale]
gb|AIK22454.1|1281027e-2465-3133-86+2269DNA-directed RNA polymerase II polypeptide C, partial [Mytilus edulis]
gb|EYC32187.1|1291027e-2465-31320-103+2305hypothetical protein Y032_0003g1449 [Ancylostoma ceylanicum]
gb|EYC32186.1|1301027e-2465-31325-108+2310hypothetical protein Y032_0003g1449 [Ancylostoma ceylanicum]
ref|XP_003739027.1|1311028e-2465-3133-86+2277PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Metaseiulus occidentalis]
gb|KHJ78801.1|1321028e-2465-3133-86+2288RNA polymerase Rpb3/Rpb11 dimerization domain protein [Oesophagostomum dentatum]
gb|EJW84811.1|1341028e-2465-3133-86+2275RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Wuchereria bancrofti]
ref|XP_006692108.1|1351021e-2377-31317-95+2344RNA polymerase II subunit 3-like protein [Chaetomium thermophilum var. thermophilum DSM 1495] gb|EGS23116.1| RNA polyme
ref|XP_003143992.1|1361021e-2365-3133-86+2275DNA-directed RNA polymerase II polypeptide [Loa loa] gb|EFO20079.1| RNA polymerase Rpb3/Rpb11 dimerization domain-contai
ref|XP_003290595.1|1371021e-2371-31310-90+2303RNA polymerase II core subunit [Dictyostelium purpureum] gb|EGC32876.1| RNA polymerase II core subunit [Dictyostelium pu
gb|KFH40313.1|1381021e-2350-31311-96+2348DNA-directed RNA polymerase II subunit-like protein [Acremonium chrysogenum ATCC 11550]
emb|CCE43818.1|1391021e-2377-3137-85+2317hypothetical protein CPAR2_500440 [Candida parapsilosis]
ref|XP_003112015.1|1401021e-2365-3133-86+2297CRE-RPB-3 protein [Caenorhabditis remanei] gb|EFP12449.1| CRE-RPB-3 protein [Caenorhabditis remanei]
gb|AJR49219.1|1421021e-2377-3136-84+2318Rpb3p [Saccharomyces cerevisiae YJM1400] gb|AJR52637.1| Rpb3p [Saccharomyces cerevisiae YJM1479]
gb|EFX86636.1|1441012e-2365-3133-86+2274hypothetical protein DAPPUDRAFT_313021 [Daphnia pulex]
gb|KHN83513.1|1451012e-2365-3133-86+2275DNA-directed RNA polymerase II subunit RPB3 [Toxocara canis]
ref|XP_002594919.1|1461012e-2365-3133-86+2275hypothetical protein BRAFLDRAFT_277672 [Branchiostoma floridae] gb|EEN50930.1| hypothetical protein BRAFLDRAFT_277672 [B
ref|XP_001387335.1|1471012e-2377-3139-87+231545 kDa subunit of RNA polymerase II [Scheffersomyces stipitis CBS 6054] gb|EAZ63312.1| 45 kDa subunit of RNA polymerase
ref|XP_629750.1|1481012e-2371-31310-90+2302RNA polymerase II core subunit [Dictyostelium discoideum AX4] sp|Q54DH7.1|RPB3_DICDI RecName: Full=DNA-directed RNA poly
gb|EMG45848.1|1501012e-2377-3139-87+2321DNA-directed RNA polymerase II subunit, putative [Candida maltosa Xu316]
gb|EPB91568.1|1511012e-2356-3134-90+2280RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Mucor circinelloides f. circinelloides 1006PhL]
emb|CDJ93440.1|1521012e-2365-3133-86+2289DNA-directed RNA polymerase domain containing protein [Haemonchus contortus]
gb|KFA68700.1|1541013e-2350-31311-96+2340hypothetical protein S40285_02607 [Stachybotrys chlorohalonata IBT 40285]
pdb|3HOW|C1571013e-2353-31327-113+2347Chain C, Complete Rna Polymerase Ii Elongation Complex Iii With A T-U Mismatch And A Frayed Rna 3'-Uridine pdb|3HOX|C C
ref|XP_001962776.1|1121003e-2465-2863-76+2125GF19666 [Drosophila ananassae] gb|EDV31997.1| GF19666 [Drosophila ananassae]
dbj|GAN11086.1|1531003e-2356-31328-114+2304conserved hypothetical protein [Mucor ambiguus]
ref|XP_004196939.1|1551003e-2377-31311-89+2308Piso0_004170 [Millerozyma farinosa CBS 7064] ref|XP_004197970.1| Piso0_004170 [Millerozyma farinosa CBS 7064] emb|CCE846
emb|CEP13513.1|1561003e-2356-3134-90+2280hypothetical protein [Parasitella parasitica]
gb|AAA34889.1|1581003e-2377-3136-84+2318RNA polymerase II (EC 2.7.7.6) [Saccharomyces cerevisiae]
ref|XP_011103943.1|1591003e-2377-3136-84+2318rpb3p [Saccharomyces arboricola H-6] gb|EJS43310.1| rpb3p [Saccharomyces arboricola H-6]
ref|NP_012243.3|1601003e-2377-3136-84+2318DNA-directed RNA polymerase II core subunit RPB3 [Saccharomyces cerevisiae S288c] sp|P16370.2|RPB3_YEAST RecName: Full=
pdb|3I4M|C1611004e-2377-31312-90+2324Chain C, 8-oxoguanine Containing Rna Polymerase Ii Elongation Complex D pdb|3I4N|C Chain C, 8-oxoguanine Containing Rna
gb|ERG87540.1|1621004e-2365-3133-86+2275dna-directed rna polymerase ii subunit rpb3 [Ascaris suum]
ref|XP_011190744.1|1631004e-2365-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Bactrocera cucurbitae] ref|XP_011197774.1| PREDICTED: DNA-direc
ref|XP_004521442.1|1641004e-2365-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Ceratitis capitata]
gb|AJR51495.1|1651004e-2377-3136-84+2318Rpb3p [Saccharomyces cerevisiae YJM1447]
ref|XP_006641241.1|1661005e-2365-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Lepisosteus oculatus]
gb|EHN01882.1|1671005e-2377-3136-84+2318Rpb3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7] gb|EJT42771.1| RPB3-like protein [Saccharomyces kudr
ref|XP_002639637.1|1681006e-2365-3133-86+2280C. briggsae CBR-RPB-3 protein [Caenorhabditis briggsae] emb|CAP31342.2| Protein CBR-RPB-3 [Caenorhabditis briggsae]
gb|EGT37944.1|1691006e-2365-3133-86+2281hypothetical protein CAEBREN_16087 [Caenorhabditis brenneri] gb|EGT37975.1| hypothetical protein CAEBREN_14407 [Caenorha
ref|NP_492361.2|1721006e-2365-3133-86+2282Protein RPB-3 [Caenorhabditis elegans] emb|CAB02268.2| RPB-3 [Caenorhabditis elegans]
ref|XP_002420168.1|1781007e-2377-3139-87+2313DNA-directed RNA polymerase II subunit, putative [Candida dubliniensis CD36] emb|CAX42390.1| DNA-directed RNA polymeras
gb|KFA50347.1|1791007e-2350-31311-96+2340hypothetical protein S40293_07541 [Stachybotrys chartarum IBT 40293]
gb|KEY70700.1|1801007e-2350-31311-96+2340hypothetical protein S7711_07326 [Stachybotrys chartarum IBT 7711] gb|KFA78418.1| hypothetical protein S40288_06399 [St
ref|XP_716556.1|1811007e-2377-3139-87+2318hypothetical protein CaO19.1248 [Candida albicans SC5314] ref|XP_716500.1| hypothetical protein CaO19.8832 [Candida albi
gb|KIP10858.1|1821007e-2377-3137-86+2410hypothetical protein PHLGIDRAFT_100423 [Phlebiopsis gigantea 11061_1 CR5-6]
gb|EFW98980.1|1831007e-2377-31316-94+2362RNA polymerase 2 subunit 3 [Grosmannia clavigera kw1407]
ref|XP_003658070.1|1841008e-2377-31315-93+2337hypothetical protein THITE_2124530 [Thielavia terrestris NRRL 8126] gb|AEO71734.1| hypothetical protein THITE_2124530 [
ref|XP_003060124.1|1851008e-2368-3079-88+2333predicted protein [Micromonas pusilla CCMP1545] gb|EEH56076.1| predicted protein [Micromonas pusilla CCMP1545]
ref|XP_002668960.1|1861008e-2380-28012-78+2324predicted protein [Naegleria gruberi] gb|EFC36216.1| predicted protein [Naegleria gruberi]
ref|XP_001969570.1|11699.83e-2465-3133-86+2117GG23887 [Drosophila erecta] gb|EDV58629.1| GG23887 [Drosophila erecta]
gb|AAN71549.1|11899.84e-2465-3133-86+2117RH25219p [Drosophila melanogaster]
ref|XP_006809168.1|14399.81e-2365-3133-86+2185PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Neolamprologus brichardi]
ref|XP_001988351.1|17099.86e-2365-3133-86+2275GH11119 [Drosophila grimshawi] ref|XP_002002474.1| GI12561 [Drosophila mojavensis] ref|XP_002057472.1| GJ18149 [Drosophi
ref|XP_002079394.1|17199.86e-2365-3133-86+2275GD23930 [Drosophila simulans] gb|EDX04979.1| GD23930 [Drosophila simulans]
ref|XP_001356237.1|17399.86e-2365-3133-86+2275GA20659 [Drosophila pseudoobscura pseudoobscura] ref|XP_002023215.1| GL21238 [Drosophila persimilis] gb|EAL33299.1| GA20
ref|XP_002088649.1|17499.86e-2365-3133-86+2275GE18688 [Drosophila yakuba] gb|EDW88361.1| GE18688 [Drosophila yakuba]
ref|XP_002035764.1|17599.86e-2365-3133-86+2275GM15286 [Drosophila sechellia] gb|EDW51687.1| GM15286 [Drosophila sechellia]
ref|NP_477419.1|17699.86e-2365-3133-86+2275RNA polymerase II 33kD subunit [Drosophila melanogaster] emb|CAB38635.1| RNA polymerase II p33 subunit [Drosophila melan
ref|XP_002549556.1|19399.81e-2277-3139-87+2327DNA-directed RNA polymerase II 45 kDa polypeptide [Candida tropicalis MYA-3404] gb|EER32182.1| DNA-directed RNA polymer
ref|XP_003667202.1|19499.81e-2277-31316-94+2337hypothetical protein MYCTH_2312782 [Myceliophthora thermophila ATCC 42464] gb|AEO61957.1| hypothetical protein MYCTH_23
gb|ELR05151.1|19599.81e-2277-31314-92+2342DNA-directed RNA polymerase II subunit C [Pseudogymnoascus destructans 20631-21]
ref|XP_002064793.1|18799.49e-2365-3133-86+2275GK15011 [Drosophila willistoni] gb|EDW75779.1| GK15011 [Drosophila willistoni]
emb|CBJ28486.1|18899.49e-2371-3105-84+2262conserved unknown protein [Ectocarpus siliculosus]
ref|XP_005181593.1|18999.49e-2365-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Musca domestica]
ref|XP_008295027.1|19099.41e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Stegastes partitus]
ref|XP_005796323.1|19199.41e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Xiphophorus maculatus] ref|XP_007558553.1| PREDICTED: DNA-
ref|XP_003439459.1|19299.41e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Oreochromis niloticus] ref|XP_004566178.1| PREDICTED: DNA-
gb|KIL85585.1|19799.41e-2250-31311-96+2342dna-directed rna polymerase ii subunit rpb3 [Fusarium avenaceum]
ref|XP_003345560.1|19899.41e-2277-31316-94+2311hypothetical protein SMAC_06213 [Sordaria macrospora k-hell] emb|CCC07270.1| unnamed protein product [Sordaria macrospor
gb|KIW44098.1|20399.42e-2277-31318-96+2334hypothetical protein PV06_05135 [Exophiala oligosperma]
gb|KIW11790.1|20499.42e-2277-31318-96+2334hypothetical protein PV08_09062 [Exophiala spinifera]
ref|XP_005537742.1|25099.46e-22533RNA polymerase II third large subunit [Cyanidioschyzon merolae strain 10D] dbj|BAM81706.1| RNA polymerase II third larg
ref|XP_002948375.1|19699.01e-22113-3041-64+2272hypothetical protein VOLCADRAFT_88650 [Volvox carteri f. nagariensis] gb|EFJ50782.1| hypothetical protein VOLCADRAFT_886
gb|EGA61941.1|20199.02e-2277-3136-84+2318Rpb3p [Saccharomyces cerevisiae FostersO]
ref|XP_003954836.1|20299.02e-2277-3136-84+2312hypothetical protein KAFR_0A02650 [Kazachstania africana CBS 2517] emb|CCF55701.1| hypothetical protein KAFR_0A02650 [K
ref|XP_011317253.1|21299.02e-2250-3138-93+2337DNA-directed RNA polymerase II 33 kDa polypeptide [Fusarium graminearum PH-1] gb|ESU06768.1| DNA-directed RNA polymeras
ref|XP_009259897.1|21399.02e-2250-31311-96+2340hypothetical protein FPSE_08504 [Fusarium pseudograminearum CS3096] gb|EKJ71265.1| hypothetical protein FPSE_08504 [Fusa
gb|KIK67404.1|21699.02e-2277-3135-84+2379hypothetical protein GYMLUDRAFT_257290 [Gymnopus luxurians FD-317 M1]
ref|NP_001161428.1|19998.62e-2265-3133-86+2275DNA-directed RNA polymerase II subunit RPB3 [Danio rerio] gb|AAH46047.1| Polymerase (RNA) II (DNA directed) polypeptide
ref|NP_001280231.1|20098.62e-2265-3133-86+2275DNA-directed RNA polymerase II subunit RPB3 [Gallus gallus]
ref|XP_006035547.1|20698.62e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Alligator sinensis]
ref|XP_005152356.1|20798.62e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Melopsittacus undulatus]
ref|NP_001232142.1|20998.62e-2265-3133-86+2275putative DNA directed RNA polymerase II polypeptide C [Taeniopygia guttata] ref|XP_005052452.1| PREDICTED: DNA-directed
pdb|3J0K|C21098.62e-2277-3136-84+2268Chain C, Orientation Of Rna Polymerase Ii Within The Human Vp16-Mediator-Pol Ii-Tfiif Assembly pdb|3J1N|C Chain C, Cryo
gb|EHJ78455.1|21198.62e-2265-3133-86+2275DNA-directed RNA polymerase II polypeptide [Danaus plexippus]
ref|XP_006261724.1|21498.62e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Alligator mississippiensis]
ref|XP_003676613.1|22098.62e-2277-3136-84+2318hypothetical protein NCAS_0E01830 [Naumovozyma castellii CBS 4309] emb|CCC70253.1| hypothetical protein NCAS_0E01830 [N
gb|EMF17748.1|22298.63e-2277-28616-85+2362insert subdomain of RNA polymerase alpha subunit [Sphaerulina musiva SO2202]
ref|XP_007878196.1|22398.63e-2259-29214-91+2349hypothetical protein PFL1_02488 [Pseudozyma flocculosa PF-1] gb|EPQ29815.1| hypothetical protein PFL1_02488 [Pseudozyma
ref|XP_007783371.1|22498.63e-2277-31317-95+2339hypothetical protein W97_07202 [Coniosporium apollinis CBS 100218] gb|EON68054.1| hypothetical protein W97_07202 [Conios
gb|KIM91837.1|22998.64e-2277-3139-88+2397hypothetical protein PILCRDRAFT_809813 [Piloderma croceum F 1598]
ref|XP_006748639.1|13398.28e-2465-3133-86+298PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Leptonychotes weddellii]
gb|EGA82407.1|20598.22e-2277-3136-84+2240Rpb3p [Saccharomyces cerevisiae Lalvin QA23]
gb|EGA78470.1|20898.22e-2277-3136-84+2240Rpb3p [Saccharomyces cerevisiae Vin13]
ref|XP_003384595.1|21798.22e-2265-3133-86+2274PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Amphimedon queenslandica]
ref|XP_004069860.1|21898.22e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Oryzias latipes]
emb|CDH51848.1|21998.22e-2256-3134-91+2280rna polymerase rpb3 rpb11 dimerization domain-containing protein [Lichtheimia corymbifera JMRC:FSU:9682]
emb|CDS03118.1|22198.22e-2256-3134-91+2280Putative RNA polymerase Rpb3/Rpb11 dimerizationdomain-containing protein [Absidia idahoensis var. thermophila]
ref|XP_002619716.1|22598.23e-2250-3131-88+2307hypothetical protein CLUG_00875 [Clavispora lusitaniae ATCC 42720] gb|EEQ36752.1| hypothetical protein CLUG_00875 [Clavi
ref|XP_004182667.1|22798.24e-2277-3136-84+2335hypothetical protein TBLA_0J01520 [Tetrapisispora blattae CBS 6284] emb|CCH63148.1| hypothetical protein TBLA_0J01520 [
gb|EJK63419.1|22898.24e-2268-2774-73+2323hypothetical protein THAOC_15929 [Thalassiosira oceanica]
gb|EQB50264.1|23098.24e-2277-31315-93+2340RNA polymerase Rpb3/RpoA insert domain-containing protein [Colletotrichum gloeosporioides Cg-14]
ref|XP_007278172.1|23198.24e-2277-31315-93+2340RNA polymerase ii subunit 3 [Colletotrichum gloeosporioides Nara gc5] gb|ELA32787.1| RNA polymerase ii subunit 3 [Colle
gb|KIW06282.1|23398.24e-2277-31315-93+2328hypothetical protein PV09_02753 [Verruconis gallopava]
gb|KDR75886.1|23998.25e-2277-3139-88+2370hypothetical protein GALMADRAFT_248631 [Galerina marginata CBS 339.88]
ref|XP_003228630.1|22697.84e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Anolis carolinensis]
ref|XP_002493766.1|23297.84e-2277-3135-83+2304RNA polymerase II third largest subunit B44, part of central core [Komagataella pastoris GS115] emb|CAY71587.1| RNA pol
gb|KFY74695.1|23797.85e-2277-31314-92+2342hypothetical protein V499_05303 [Pseudogymnoascus pannorum VKM F-103]
gb|KFY20007.1|23897.85e-2277-31314-92+2342hypothetical protein V491_04062 [Pseudogymnoascus pannorum VKM F-3775]
gb|KFY30970.1|24197.85e-2277-31314-92+2342hypothetical protein V493_01497 [Pseudogymnoascus pannorum VKM F-4281 (FW-2241)]
ref|XP_970635.1|23597.44e-2265-2863-76+2274PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Tribolium castaneum] gb|EFA03015.1| hypothetical protein TcasGA
ref|NP_989124.1|23697.44e-2265-3133-86+2275polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Xenopus (Silurana) tropicalis] gb|AAH61444.1| polymerase (RNA)
ref|XP_003757327.1|24097.45e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 isoform 1 [Sarcophilus harrisii]
ref|XP_005873579.1|24297.45e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Myotis brandtii] gb|EPQ12264.1| DNA-directed RNA polymerase II
ref|XP_001365715.1|24397.45e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Monodelphis domestica]
ref|XP_007509325.1|24497.46e-2277-2925-76+2298DNA-directed RNA polymerase II subunit RPB3 [Bathycoccus prasinos] emb|CCO19782.1| DNA-directed RNA polymerase II subuni
gb|EDL87318.1|14997.12e-2365-3133-86+292polymerase (RNA) II (DNA directed) polypeptide C, isoform CRA_c [Rattus norvegicus]
ref|XP_006872581.1|17797.17e-2365-2863-76+2148PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Chrysochloris asiatica]
ref|NP_001029384.1|24597.16e-2265-3133-86+2275DNA-directed RNA polymerase II subunit RPB3 [Bos taurus] ref|XP_535283.2| PREDICTED: DNA-directed RNA polymerase II subu
ref|XP_006098765.1|24697.16e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Myotis lucifugus] ref|XP_006105249.1| PREDICTED: DNA-direc
ref|XP_004690587.1|24797.16e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Condylura cristata]
ref|XP_004264975.1|24897.16e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Orcinus orca] ref|XP_004313267.1| PREDICTED: DNA-directed RNA p
ref|XP_003355849.1|24997.16e-2265-3133-86+2275PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Sus scrofa] ref|XP_004670779.1| PREDICTED: DNA-directed RNA poly
dbj|BAH12113.1|23495.14e-2265-3133-86+2155unnamed protein product [Homo sapiens]
gb|AAZ32911.1|54t155184DNA-directed RNA polymerase II third largest subunit [Medicago sativa]
ref|NP_001156090.1|122e102273DNA-directed RNA polymerase II polypeptide-like [Acyrthosiphon pisum] dbj|BAH71223.1| ACYPI001769 [Acyrthosiphon pisum]
ref|XP_011130153.1|141t97.489putative DNA-directed RNA polymerase II subunit, partial [Gregarina niphandrodes] gb|EZG67804.1| putative DNA-directed
dbj|BAD06460.1|215t98.2275homologue of DNA-directed RNA polymerase II subunit [Antheraea pernyi] dbj|BAD06461.1| homologue of DNA-directed RNA po