Clone JMFN018L18 [sequences]

contigF:008073 contigR:

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
ref\|XP_004244188.1\|	1	90.5	1e-18	278-460	101-161	+2							382	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Solanum lycopersicum]
ref\|XP_006360127.1\|	2	89.7	1e-18	254-460	41-109	+2							306	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein-like isoform X1 [Solanum tuberosum]
ref\|XP_010324347.1\|	3	89.7	1e-18	269-460	18-81	+2							302	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Solanum lycopersicum]
ref\|XP_009594825.1\|	4	89.7	2e-18	269-460	72-135	+2							356	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Nicotiana tomentosiformis]
ref\|XP_009594827.1\|	5	89.4	2e-18	269-460	7-70	+2							291	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X3 [Nicotiana tomentosiformis]
ref\|XP_006360128.1\|	6	89.4	2e-18	278-460	50-110	+2							331	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein-like isoform X2 [Solanum tuberosum]
ref\|XP_009594826.1\|	7	88.2	6e-18	278-460	74-134	+2							355	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Nicotiana tomentosiformis]
ref\|XP_011044544.1\|	8	86.3	3e-17	278-460	65-125	+2							346	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Populus euphratica]
gb\|KJB81880.1\|	9	85.5	4e-17	278-460	66-126	+2							277	hypothetical protein B456_013G166200 [Gossypium raimondii]
gb\|KJB81879.1\|	10	85.1	5e-17	278-460	66-126	+2							237	hypothetical protein B456_013G166200 [Gossypium raimondii]
gb\|KHG01714.1\|	11	85.1	8e-17	278-460	66-126	+2							348	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 [Gossypium arboreum]
gb\|KJB81881.1\|	12	85.1	8e-17	278-460	66-126	+2							332	hypothetical protein B456_013G166200 [Gossypium raimondii]
gb\|KJB81878.1\|	13	85.1	1e-16	278-460	66-126	+2							348	hypothetical protein B456_013G166200 [Gossypium raimondii] gb\|KJB81882.1\| hypothetical protein B456_013G166200 [Gossypiu
gb\|KHG01713.1\|	14	85.1	1e-16	278-460	66-126	+2							371	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 [Gossypium arboreum]
gb\|KHG01712.1\|	15	85.1	1e-16	278-460	66-126	+2							389	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 [Gossypium arboreum]
ref\|XP_010062906.1\|	16	83.6	3e-16	278-460	78-138	+2							342	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Eucalyptus grandis] gb\|KCW70052.1\|
ref\|XP_010268823.1\|	18	83.6	4e-16	278-460	77-136	+2							358	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Nelumbo nucifera]
ref\|XP_007021268.1\|	17	83.2	4e-16	278-460	66-126	+2							347	Cytochrome c-type biogenesis ccda chloroplastic protein isoform 1 [Theobroma cacao] gb\|EOY12793.1\| Cytochrome c-type bi
ref\|XP_006370335.1\|	19	81.6	1e-15	278-460	37-96	+2							317	hypothetical protein POPTR_0001s41750g [Populus trichocarpa] gb\|ERP66904.1\| hypothetical protein POPTR_0001s41750g [Popu
gb\|KDP38944.1\|	20	81.6	2e-15	278-460	63-123	+2							344	hypothetical protein JCGZ_00701 [Jatropha curcas]
ref\|XP_010694423.1\|	21	80.1	7e-15	278-460	77-137	+2							358	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Beta vulgaris subsp. vulgaris]
ref\|XP_010694424.1\|	22	79.7	7e-15	278-460	76-136	+2							357	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Beta vulgaris subsp. vulgaris]
emb\|CDP05857.1\|	23	79.0	1e-14	278-457	55-114	+2							342	unnamed protein product [Coffea canephora]
ref\|XP_010062905.1\|	24	79.0	2e-14	278-460	78-145	+2							349	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Eucalyptus grandis]
gb\|KDO74216.1\|	25	77.8	3e-14	278-460	60-120	+2							325	hypothetical protein CISIN_1g019423mg [Citrus sinensis]
ref\|XP_010644236.1\|	27	77.8	4e-14	290-460	80-136	+2							357	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Vitis vinifera]
ref\|XP_002284546.1\|	28	77.8	4e-14	290-460	81-137	+2							358	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Vitis vinifera] ref\|XP_010644235.1\|
ref\|XP_006464679.1\|	29	77.4	4e-14	278-460	60-120	+2							341	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein-like isoform X1 [Citrus sinensis] ref\|XP_006464
ref\|XP_009770748.1\|	26	77.0	4e-14	314-460	1-49	+2							270	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Nicotiana sylvestris]
ref\|XP_002531046.1\|	30	76.6	1e-13	278-460	68-129	+2							350	Thiol:disulfide interchange protein dsbD precursor, putative [Ricinus communis] gb\|EEF31339.1\| Thiol:disulfide intercha
ref\|XP_010101791.1\|	31	76.3	1e-13	278-460	72-125	+2							347	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 [Morus notabilis] gb\|EXB89646.1\| Cytochrome c-type bioge
ref\|XP_008386096.1\|	33	76.3	1e-13	278-460	84-143	+2							341	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Malus domestica]
ref\|XP_008226705.1\|	35	75.9	2e-13	278-460	79-139	+2							360	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Prunus mume]
ref\|XP_009342447.1\|	38	75.9	3e-13	278-460	84-143	+2							364	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Pyrus x bretschneideri]
ref\|XP_008349970.1\|	34	75.5	2e-13	278-460	5-64	+2							285	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Malus domestica] ref\|XP_008359316.1\| PREDICTED
ref\|XP_008359317.1\|	32	75.1	1e-13	278-460	5-64	+2							278	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Malus domestica]
ref\|XP_007213818.1\|	36	75.1	2e-13	278-460	47-107	+2							311	hypothetical protein PRUPE_ppa008988mg [Prunus persica] gb\|EMJ15017.1\| hypothetical protein PRUPE_ppa008988mg [Prunus pe
ref\|XP_011461155.1\|	37	75.1	3e-13	278-460	46-106	+2							328	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Fragaria vesca subsp. vesca]
ref\|XP_004294507.1\|	39	75.1	4e-13	278-460	78-138	+2							360	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Fragaria vesca subsp. vesca]
ref\|XP_009342446.1\|	40	74.7	6e-13	278-460	84-149	+2							370	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Pyrus x bretschneideri]
ref\|XP_004149294.1\|	41	74.3	8e-13	278-460	81-141	+2							362	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like [Cucumis sativus] ref\|XP_004171453.1\| PR
ref\|XP_008452288.1\|	42	74.3	8e-13	278-460	78-138	+2							359	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Cucumis melo]
ref\|XP_008452287.1\|	43	74.3	9e-13	278-460	84-144	+2							365	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo]
ref\|XP_006451992.1\|	44	71.6	3e-12	314-460	1-49	+2							270	hypothetical protein CICLE_v10009149mg [Citrus clementina] gb\|ESR65232.1\| hypothetical protein CICLE_v10009149mg [Citrus
ref\|XP_011095259.1\|	45	70.9	1e-11	281-460	78-137	+2							358	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Sesamum indicum]
ref\|XP_009410428.1\|	46	69.7	3e-11	278-460	66-125	+2							347	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 1 [Musa acuminata subsp. malaccensis]
ref\|XP_003527280.1\|	47	69.3	4e-11	338-460	83-123	+2							344	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein-like [Glycine max]
gb\|ACU23864.1\|	48	69.3	4e-11	338-460	79-119	+2							340	unknown [Glycine max]
gb\|KHN46954.1\|	51	69.3	8e-11	338-460	299-339	+2							560	Proteasome subunit alpha type-6 [Glycine soja]
ref\|NP_001240262.1\|	50	68.9	7e-11	278-460	70-123	+2							344	cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like [Glycine max] ref\|XP_006591899.1\| PREDICTED: cytoch
ref\|XP_006591900.1\|	49	68.6	5e-11	278-460	70-123	+2							319	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like isoform X2 [Glycine max]
gb\|KHN16011.1\|	52	68.6	1e-10	278-460	85-138	+2							359	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2, partial [Glycine soja]
gb\|EYU19159.1\|	53	68.2	1e-10	281-460	74-133	+2							354	hypothetical protein MIMGU_mgv1a009060mg [Erythranthe guttata]
ref\|XP_008366488.1\|	55	66.2	4e-10	341-460	47-86	+2							307	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Malus domestica]
ref\|XP_006451991.1\|	54	65.9	3e-10	338-460	16-56	+2							277	hypothetical protein CICLE_v10009149mg [Citrus clementina] ref\|XP_006464681.1\| PREDICTED: cytochrome c-type biogenesis c
ref\|XP_004977496.1\|	56	65.1	1e-09	278-460	66-125	+2							347	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 1-like [Setaria italica]
gb\|KEH19586.1\|	58	64.7	3e-09	329-460	119-162	+2							384	C-type cytochrome biogenesis protein [Medicago truncatula]
ref\|XP_004978636.1\|	57	64.3	2e-09	278-460	66-125	+2							347	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 1-like [Setaria italica]
ref\|XP_008669897.1\|	59	64.3	3e-09	263-460	148-211	+2							415	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 isoform X6 [Zea mays]
ref\|XP_008669892.1\|	63	64.3	3e-09	263-460	148-211	+2							433	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 isoform X2 [Zea mays]
ref\|XP_008669896.1\|	64	64.3	3e-09	263-460	140-203	+2							425	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 isoform X5 [Zea mays]
ref\|XP_008669894.1\|	65	64.3	3e-09	263-460	148-211	+2							428	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 isoform X4 [Zea mays]
ref\|XP_006857711.1\|	60	63.9	3e-09	278-460	71-134	+2							356	hypothetical protein AMTR_s00061p00174500 [Amborella trichopoda] gb\|ERN19178.1\| hypothetical protein AMTR_s00061p0017450
gb\|AAO16020.1\|	61	63.9	3e-09	338-460	77-117	+2							338	biogenesis protein [Medicago truncatula]
tpg\|DAA39231.1\|	62	63.9	3e-09	263-460	45-108	+2							330	TPA: hypothetical protein ZEAMMB73_102687 [Zea mays]
ref\|XP_006664317.1\|	66	63.9	4e-09	278-460	84-143	+2							364	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like [Oryza brachyantha]
emb\|CBX25365.1\|	67	63.9	4e-09	278-460	89-148	+2							365	hypothetical_protein [Oryza brachyantha]
ref\|XP_008669891.1\|	69	63.9	5e-09	263-460	148-211	+2							439	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 isoform X1 [Zea mays]
ref\|XP_008669893.1\|	70	63.9	5e-09	263-460	140-203	+2							431	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 isoform X3 [Zea mays]
ref\|XP_002450242.1\|	71	63.2	6e-09	278-460	70-131	+2							353	hypothetical protein SORBIDRAFT_05g002430 [Sorghum bicolor] gb\|EES09230.1\| hypothetical protein SORBIDRAFT_05g002430 [So
ref\|XP_007133142.1\|	72	63.2	6e-09	338-460	83-123	+2							345	hypothetical protein PHAVU_011G155100g [Phaseolus vulgaris] gb\|ESW05136.1\| hypothetical protein PHAVU_011G155100g [Phase
ref\|XP_008806584.1\|	74	62.8	8e-09	278-460	59-118	+2							340	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 isoform X1 [Phoenix dactylifera]
sp\|Q2RAR6.1\|CCDA1_ORYSJ	75	62.8	1e-08	278-460	86-145	+2							367	RecName: Full=Cytochrome c-type biogenesis ccda-like chloroplastic protein 1; AltName: Full=Cytochrome b6f biogenesis p
gb\|ABA95764.1\|	68	62.4	4e-09	278-460	81-140	+2							245	Cytochrome C biogenesis protein transmembrane region containing protein, expressed [Oryza sativa Japonica Group]
ref\|XP_008806585.1\|	73	62.4	7e-09	278-460	17-76	+2							298	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 isoform X2 [Phoenix dactylifera]
gb\|EEC67640.1\|	76	62.4	1e-08	278-460	81-140	+2							362	hypothetical protein OsI_35045 [Oryza sativa Indica Group] gb\|EEE51628.1\| hypothetical protein OsJ_32910 [Oryza sativa J
gb\|EEE52740.1\|	77	62.4	1e-08	278-460	81-140	+2							340	hypothetical protein OsJ_35161 [Oryza sativa Japonica Group]
ref\|XP_010482839.1\|	78	62.4	1e-08	278-460	74-135	+2							357	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Camelina sativa]
emb\|CBX24416.1\|	79	62.4	1e-08	278-460	81-140	+2							353	hypothetical_protein [Oryza glaberrima]
gb\|AAQ95739.1\|	80	62.4	1e-08	278-460	70-131	+2							353	c-type cytochrome biogenesis protein [Descurainia sophia]
sp\|Q2QY07.1\|CCDA2_ORYSJ	81	62.0	2e-08	278-460	81-140	+2							362	RecName: Full=Cytochrome c-type biogenesis ccda-like chloroplastic protein 2; AltName: Full=Cytochrome b6f biogenesis p
ref\|XP_010443011.1\|	82	62.0	2e-08	278-460	74-135	+2							357	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Camelina sativa]
ref\|XP_010446780.1\|	83	62.0	2e-08	278-460	74-135	+2							352	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Camelina sativa]
ref\|XP_006280713.1\|	84	62.0	2e-08	278-460	72-133	+2							355	hypothetical protein CARUB_v10026678mg [Capsella rubella] gb\|EOA13611.1\| hypothetical protein CARUB_v10026678mg [Capsell
ref\|XP_010922233.1\|	86	61.6	2e-08	278-460	58-117	+2							339	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 [Elaeis guineensis]
ref\|NP_200240.1\|	87	60.8	3e-08	278-460	71-132	+2							354	cytochrome c-type biogenesis ccda-like chloroplastic protein [Arabidopsis thaliana] sp\|Q9M5P3.1\|CCDA_ARATH RecName: Ful
ref\|NP_001190537.1\|	89	60.8	4e-08	278-460	72-133	+2							355	cytochrome c-type biogenesis ccda-like chloroplastic protein [Arabidopsis thaliana] gb\|AED96481.1\| cytochrome c-type bi
gb\|AAO16018.1\|	90	60.8	4e-08	338-460	83-123	+2							345	chloroplast biogenesis protein [Lotus japonicus]
emb\|CBX25363.1\|	85	60.5	2e-08	278-460	13-71	+2							249	hypothetical_protein [Oryza brachyantha]
emb\|CBX25277.1\|	88	60.5	3e-08	353-460	88-123	+2							283	hypothetical_protein [Oryza brachyantha]
ref\|XP_002864324.1\|	91	60.5	6e-08	278-460	67-128	+2							350	cytochrome c biogenesis protein family [Arabidopsis lyrata subsp. lyrata] gb\|EFH40583.1\| cytochrome c biogenesis protei
emb\|CBX25456.1\|	92	60.1	6e-08	278-457	86-143	+2							355	hypothetical_protein [Oryza glaberrima]
ref\|XP_009127099.1\|	93	60.1	7e-08	278-460	78-139	+2							361	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Brassica rapa]
gb\|AAM64755.1\|	94	60.1	8e-08	278-460	71-132	+2							354	cytochrome c biogenesis protein precursor [Arabidopsis thaliana]
ref\|XP_004516451.1\|	95	59.7	8e-08	341-460	87-126	+2							347	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 1-like isoform X2 [Cicer arietinum]
ref\|XP_004516450.1\|	96	59.7	8e-08	341-460	88-127	+2							348	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 1-like isoform X1 [Cicer arietinum]
gb\|KFK27046.1\|	97	59.7	1e-07	278-460	76-137	+2							359	hypothetical protein AALP_AA8G327400 [Arabis alpina]
ref\|XP_010536998.1\|	98	59.3	1e-07	278-460	78-138	+2							360	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Tarenaya hassleriana]
gb\|AAK93606.1\|	99	58.5	3e-07	278-460	71-132	+2							354	putative cytochrome c biogenesis protein precursor [Arabidopsis thaliana]
ref\|XP_006401588.1\|	100	57.4	6e-07	278-460	74-135	+2							357	hypothetical protein EUTSA_v10013940mg [Eutrema salsugineum] gb\|ESQ43041.1\| hypothetical protein EUTSA_v10013940mg [Eutr
gb\|AAO16019.1\|	101	56.2	1e-06	356-460	88-122	+2							344	biogenesis protein [Hordeum vulgare subsp. vulgare] dbj\|BAJ96073.1\| predicted protein [Hordeum vulgare subsp. vulgare]
dbj\|BAJ95334.1\|	102	56.2	1e-06	356-460	88-122	+2							341	predicted protein [Hordeum vulgare subsp. vulgare]
emb\|CDY52241.1\|	103	55.5	3e-06	278-460	77-156	+2							378	BnaC02g44620D [Brassica napus]
ref\|XP_003578956.1\|	104	55.5	3e-06	353-460	91-126	+2							348	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 1 [Brachypodium distachyon]
emb\|CDY28776.1\|	105	55.1	4e-06	341-460	121-160	+2							382	BnaA02g09680D [Brassica napus]
emb\|CBX25275.1\|	106	54.3	4e-06	368-460	43-73	+2							255	hypothetical_protein [Oryza brachyantha]
gb\|EPS68615.1\|	107	53.9	5e-06										267	hypothetical protein M569_06152, partial [Genlisea aurea]