BLAST results

[Archaea] [Bacteria] [Eukaryota] [Viruses] [Metazoa] [green plants] [higher plants] [Others]
BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig13472
         (473 letters)

Database: nr-aa:  Non-redundant protein sequence database Release
05-06-11 
           1,806,583 sequences; 581,917,975 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb:AC092781_1735747 Oryza sativa chromosome 3 BAC OSJNBb0094O03 ...   120   9e-27   
pir|T48952|T48952 ribosomal S29-like protein - Arabidopsis thali...   120   1e-26   Arabidopsis thaliana [mouse-ear cress]
gb:AK175731_1817719 Arabidopsis thaliana mRNA for ribosomal S29 ...   117   6e-26   
gb:AY846831_1630732 Triticum aestivum ribosomal protein S29 mRNA...   117   8e-26   
gb:AK176815_1818803 Arabidopsis thaliana mRNA for ribosomal S29 ...   115   2e-25   
gb:AY389605_1178240 Hyacinthus orientalis ribosomal protein S29 ...    98   6e-20   
sp|Q7XYB0|RS29_GRIJA|RS29_GRIJA 40S ribosomal protein S29.>gb:AF517851_1807...    97   1e-19   Griffithsia japonica
gb:AF542029_1810004 Griffithsia japonica ribosomal S29-like prot...    92   3e-18   
pir|C90120|C90120 40S ribosomal protein S29A [imported] - Guilla...    90   1e-17   Guillardia theta
gb:AY264807_1314122 Branchiostoma belcheri tsingtaunese ribosoma...    89   4e-17   
gb:AB180417_1202435 Plutella xylostella mRNA for Ribosomal prote...    88   5e-17   
sp|Q8WQI3|RS29_SPOFR|RS29_SPOFR 40S ribosomal protein S29.>gb:AY072293_1295...    88   7e-17   Spodoptera frugiperda
gb:AY769345_1350496 Bombyx mori ribosomal protein S29 (RpS29) mR...    87   1e-16   
sp|Q9C2P2|RS29_NEUCR|RS29_NEUCR 40S ribosomal protein S29.>gb:NC17E5_168836...    87   1e-16   
gb:AY561513_2537703 Danio rerio ribosomal protein S29 (rps29) mR...    86   2e-16   
gb:AE016818_1748200 Ashbya gossypii (= Eremothecium gossypii) AT...    86   3e-16   
pir|S30298|S30298 ribosomal protein S29, cytosolic [validated] -...    85   4e-16   Rattus norvegicus [brown rat]
gb:AF402840_2492086 Ictalurus punctatus 40S ribosomal protein S2...    85   6e-16   
gb:AY829792_1180191 Lonomia obliqua ribosomal protein 8 mRNA, co...    84   7e-16   
gb:U80953_1406521 Caenorhabditis elegans cosmid B0412, complete ...    84   1e-15   
pir|S48503|S48503 ribosomal protein S29.e.A, cytosolic - yeast (...    84   1e-15   Saccharomyces cerevisiae [brewer's yeast]
pir|T25449|T25449 hypothetical protein B0412.4 - Caenorhabditis ...    84   1e-15   Caenorhabditis elegans [roundworm]
sp|Q9NB51|RS29_CULQU|RS29_CULQU 40S ribosomal protein S29.>gb:AF266749_1257...    83   2e-15   Culex quinquefasciatus
sp|P62276|RS29_BOVIN|RS29_BOVIN 40S ribosomal protein S29.>sp|P62273|RS29_H...    83   2e-15   Bos taurus [bovine]
sp|Q90YP2|RS29_ICTPU|RS29_ICTPU 40S ribosomal protein S29.                        83   2e-15   Ictalurus punctatus
gb:AC116920_1206386 Dictyostelium discoideum chromosome 2 map 44...    82   5e-15   
sp|P41057|R29A_YEAST|R29A_YEAST 40S ribosomal protein S29-A (S36) (YS29).         82   5e-15   Saccharomyces cerevisiae [brewer's yeast]
gb:AY075533_1296323 Drosophila melanogaster RH06643 full insert ...    81   6e-15   
sp|Q9VH69|RS29_DROME|RS29_DROME 40S ribosomal protein S29.>gb:AE014297_1138...    81   6e-15   Drosophila melanogaster
gb:CR380950_1649688 Candida glabrata strain CBS138 chromosome D ...    81   8e-15   
gb:AGA439060_1281905 Anopheles gambiae DNA from 2R chromosome, c...    81   8e-15   
gb:AY550074_1431349 Sus scrofa 40S ribosomal protein S29 mRNA, c...    80   1e-14   
pir|S48504|S48504 ribosomal protein S29.e.B, cytosolic - yeast (...    80   1e-14   Saccharomyces cerevisiae [brewer's yeast]
sp|P41058|R29B_YEAST|R29B_YEAST 40S ribosomal protein S29-B (S36) (YS29).         79   4e-14   Saccharomyces cerevisiae [brewer's yeast]
gb:CR382133_1666798 Debaryomyces hansenii chromosome A of strain...    78   5e-14   
gb:CR382128_1660691 Yarrowia lipolytica chromosome B of strain C...    76   3e-13   
gb:CR382125_1657439 Kluyveromyces lactis strain NRRL Y-1140 chro...    75   6e-13   
gb:AB002777_1192798 Entamoeba histolytica mRNA for ribosomal pro...    74   1e-12   
pir|T39525|T39525 40s ribosomal protein S14 type - fission yeast...    72   5e-12   Schizosaccharomyces pombe
gb:AE017343_1755671 Cryptococcus neoformans var. neoformans JEC2...    70   1e-11   
sp|O74329|RS29_SCHPO|RS29_SCHPO 40S ribosomal protein S29.                        70   2e-11   Schizosaccharomyces pombe
gb:CR548612_1375376 Paramecium tetraurelia macronuclear largest ...    69   4e-11   
gb:AF486840_1276108 Aplysia californica 40S ribosomal protein S2...    68   5e-11   
gb:AE010413_262854 Methanopyrus kandleri AV19 section 112 of 157...    65   4e-10   
gb:AY714845_1189525 Uncultured archaeon GZfos27B6 clone GZfos27B...    62   3e-09   
sp|O26125|RS14_METTH|RS14_METTH 30S ribosomal protein S14P.>pir|C69094|C690...    60   1e-08   Methanothermobacter thermautotrophicus
sp|O28368|RS14_ARCFU|RS14_ARCFU 30S ribosomal protein S14P.>pir|F69488|F694...    59   3e-08   Archaeoglobus fulgidus
gb:BX957222_844666 Methanococcus maripaludis S2 complete genome;...    56   2e-07   
sp|Q97ZQ5|RS14_SULSO|RS14_SULSO 30S ribosomal protein S14P.>pir|F90218|F902...    56   3e-07   Saccharolobus solfataricus
sp|P14041|RS14_METVA|RS14_METVA 30S ribosomal protein S14P.>pir|S05618|R3MX...    56   3e-07   Methanococcus vannielii
sp|Q975J4|RS14_SULTO|RS14_SULTO 30S ribosomal protein S14P.>gb:BA000023_690...    55   5e-07   Sulfurisphaera tokodaii
gb:AE017199_403058 Nanoarchaeum equitans Kin4-M, complete genome.      54   1e-06   
gb:AY534910_626212 Uncultured marine group II euryarchaeote Deep...    54   1e-06   
sp|P58731|RS14_AERPE|RS14_AERPE 30S ribosomal protein S14P.                       53   2e-06   Aeropyrum pernix
gb:AP006878_576679 Thermococcus kodakaraensis strain KOD1 DNA, c...    53   2e-06   
sp|Q97BW2|RS14_THEVO|RS14_THEVO 30S ribosomal protein S14P.>gb:BA000011_664...    53   2e-06   Thermoplasma volcanium
gb:BT001305_1356078 Drosophila melanogaster AT13329 full insert ...    52   3e-06   
gb:AE014297_1138754 Drosophila melanogaster chromosome 3R, compl...    52   3e-06   
sp|P62012|RS14_PYRAB|RS14_PYRAB 30S ribosomal protein S14P.>sp|P62013|RS14_...    52   4e-06   Pyrococcus abyssi
sp|P54110|RS14_METJA|RS14_METJA 30S ribosomal protein S14P.                       52   4e-06   Methanocaldococcus jannaschii
sp|Q9HIS1|RS14_THEAC|RS14_THEAC 30S ribosomal protein S14P.>gb:TACID5_19701...    52   5e-06   Thermoplasma acidophilum
gb:AE010775_266447 Methanosarcina acetivorans str. C2A, section ...    51   9e-06   
gb:AE010278_261377 Pyrococcus furiosus DSM 3638, section 153 of ...    51   9e-06   
gb:CNS07EGB_1373083 chromosome IV of strain GB-M1 of Encephalito...    50   1e-05   
gb:AE017261_419671 Picrophilus torridus DSM 9790, complete genome.     50   1e-05   
sp|Q8ZVW1|RS14_PYRAE|RS14_PYRAE 30S ribosomal protein S14P.>gb:AE009857_256...    50   1e-05   Pyrobaculum aerophilum
gb:AE013454_292468 Methanosarcina mazei strain Goe1, section 236...    50   2e-05   
sp|O05635|RS14_SULAC|RS14_SULAC 30S ribosomal protein S14P.>gb:SSSPCOPER_19...    49   3e-05   Sulfolobus acidocaldarius
sp|Q9HPC0|RS14_HALN1|RS14_HALN1 30S ribosomal protein S14P.>pir|B84323|B843...    47   1e-04   Halobacterium sp.
gb:AB007165_1863931 Homo sapiens gene for ribosomal protein S29,...    47   2e-04   
pir|T07168|T07168 hypothetical 14.3K protein - tomato>gb:LES1612...    45   6e-04   Solanum lycopersicum
sp|P26816|RS14_HALMA|RS14_HALMA 30S ribosomal protein S14P (HmaS14).>pir|S1...    44   0.001   Haloarcula marismortui
sp|Q97EJ1|RS14_CLOAB|RS14_CLOAB 30S ribosomal protein S14.>pir|H97283|H9728...    40   0.016   Clostridium acetobutylicum
sp|Q8XHT6|RS14_CLOPE|RS14_CLOPE 30S ribosomal protein S14.>gb:BA000016_6754...    39   0.035   Clostridium perfringens
gb:AE017308_437870 Mycoplasma mobile 163K complete genome.             36   0.23    
pir|S02844|R3YM14 ribosomal protein S14 - Mycoplasma capricolum>...    36   0.30    
sp|P10130|RS14_MYCCA|RS14_MYCCA 30S ribosomal protein S14.                        36   0.30    Mycoplasma capricolum
gb:BX294146_769408 Pirellula sp. strain 1 complete genome; segme...    35   0.66    
sp|Q9ZJS5|RS14_HELPJ|RS14_HELPJ 30S ribosomal protein S14.>pir|B71834|B7183...    35   0.66    Helicobacter pylori J99
gb:AE014295_312252 Bifidobacterium longum NCC2705, complete genome.    34   0.87    
gb:AE017332_445461 Mycoplasma hyopneumoniae 232, complete genome.      34   1.1     
gb:AE015945_321646 Clostridium tetani E88, section 10 of 10 of t...    34   1.1     
gb:BA000026_694350 Mycoplasma penetrans HF-2 DNA, complete genome.     33   1.5     
gb:AP006840_570248 Symbiobacterium thermophilum DNA, complete ge...    33   1.5     
gb:AE017263_420688 Mesoplasma florum L1 complete genome.               33   1.5     
gb:AE017248_415828 Treponema denticola ATCC 35405, section 3 of ...    33   1.9     
sp|Q98PZ5|RS14_MYCPU|RS14_MYCPU 30S ribosomal protein S14.>pir|F90583|F9058...    33   1.9     Mycoplasma pulmonis
sp|P56021|RS14_HELPY|RS14_HELPY 30S ribosomal protein S14.>pir|B64683|B6468...    33   1.9     Helicobacter pylori
sp|Q9L0C7|R14A_STRCO|R14A_STRCO 30S ribosomal protein S14-1.>gb:SCO939121_1...    33   2.5     Streptomyces coelicolor
gb:AY198133_596875 Spiroplasma kunkelii strain CR2-3x partial ge...    32   3.3     
gb:AP006618_557171 Nocardia farcinica IFM 10152 DNA, complete ge...    32   3.3     
gb:AE017313_439567 Desulfovibrio vulgaris subsp. vulgaris str. H...    32   3.3     
gb:AE016967_369333 Mycoplasma gallisepticum strain R section 1 o...    32   3.3     
gb:AE013171_289847 Thermoanaerobacter tengcongensis MB4, section...    32   3.3     
sp|O52345|RS14_MYCGA|RS14_MYCGA 30S ribosomal protein S14.>gb:AF036708_4715...    32   3.3     Mycoplasma gallisepticum
gb:AE017328_444184 Listeria monocytogenes str. 4b F2365, section...    32   5.6     
gb:AY386371_2340967 Yaba monkey tumor virus, complete genome.          31   7.3     
gb:BA000028_694519 Oceanobacillus iheyensis HTE831 DNA, complete...    31   7.3     
gb:AE017333_448082 Bacillus licheniformis DSM 13, complete genom...    31   7.3     
gb:AE017333_446082 Bacillus licheniformis DSM 13, complete genom...    31   7.3     
pir|S05995|R3BS14 ribosomal protein S14 - Bacillus subtilis>gb:B...    31   7.3     
sp|Q9ZAE6|RS14_THEMA|RS14_THEMA 30S ribosomal protein S14.>pir|G72248|G7224...    31   7.3     Thermotoga maritima
sp|Q927M0|R14A_LISMO|R14A_LISMO 30S ribosomal protein S14-1.>pir|AC1402|AC1...    31   7.3     Listeria monocytogenes
sp|P12878|R14A_BACSU|R14A_BACSU 30S ribosomal protein S14-1 (BS-A).               31   7.3     Bacillus subtilis
gb:AB112927_1200241 Drosophila melanogaster rph mRNA for rabphil...    31   9.6     
gb:AE014298_1125101 Drosophila melanogaster chromosome X, comple...    31   9.6     
gb:AE017283_431606 Propionibacterium acnes KPA171202, complete g...    31   9.6     
sp|Q9PLY4|RS14_CAMJE|RS14_CAMJE 30S ribosomal protein S14.>pir|B81267|B8126...    31   9.6     Campylobacter jejuni


>gb:AC092781_1735747 Oryza sativa chromosome 3 BAC OSJNBb0094O03
           genomic sequence, complete sequence.
          Length = 56

 Score =  120 bits (301), Expect = 9e-27
 Identities = 49/56 (87%), Positives = 53/56 (94%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           MGHSN+WN+HPK YGPGSR CRVCGN HG+IRKYGLMCCRQCFRSNAK+IGFIKYR
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56



>pir|T48952|T48952 ribosomal S29-like protein - Arabidopsis
           thaliana>gb:ATT15B3_1554505 Arabidopsis thaliana DNA
           chromosome 3, BAC clone T15B3.>gb:ATT15B3_1554508
           Arabidopsis thaliana DNA chromosome 3, BAC clone
           T15B3.>gb:AY086371_1571420 Arabidopsis thaliana clone
           24629 mRNA, complete sequence.>gb:AY086767_1571810
           Arabidopsis thaliana clone 2749 mRNA, complete
           sequence.>gb:AY088245_1573266 Arabidopsis thaliana clone
           473 mRNA, complete sequence.>gb:AY129480_1581131
           Arabidopsis thaliana AT3g43980/T15B3_120 mRNA, complete
           cds.>gb:BT002766_1636368 Arabidopsis thaliana clone
           RAFL15-04-A21 (R20117) putative ribosomal protein S29
           (At3g44010) mRNA, complete cds.>gb:BT004344_1637416
           Arabidopsis thaliana clone U20117 putative ribosomal
           protein S29 (At3g44010) mRNA, complete
           cds.>gb:AF324695_1786407 Arabidopsis thaliana AT3g43980
           (AT3g43980/T15B3_120) mRNA, complete
           cds.>gb:AF325031_1786485 Arabidopsis thaliana AT3g43980
           (AT3g43980/T15B3_120) mRNA, complete
           cds.>gb:AF326888_1786747 Arabidopsis thaliana putative
           ribosomal S29 protein (At3g43980) mRNA, complete
           cds.>gb:AF349528_1790214 Arabidopsis thaliana putative
           ribosomal S29 protein (At3g43980) mRNA, complete
           cds.>gb:AF361851_1791442 Arabidopsis thaliana
           AT3g43980/T15B3_120 mRNA, complete
           cds.>gb:AK118617_1816584 Arabidopsis thaliana At4g33865
           mRNA for putative ribosomal S29 subunit, complete cds,
           clone: RAFL19-88-C17.>gb:AK175132_1817120 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-54-P17.>gb:AK175152_1817140 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-57-E24.>gb:AK175172_1817160 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-59-A02.>gb:AK175173_1817161 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-59-B22.>gb:AK175283_1817271 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-72-B11.>gb:AK175739_1817727 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL22-28-I01.>gb:AK175918_1817906 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL22-58-A09.>gb:AK176060_1818048 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL22-80-C13.>gb:AK176294_1818282 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL23-24-E02.>gb:AK176295_1818283 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL23-24-M01.>gb:AK176322_1818310 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL23-29-F01.>gb:AK176332_1818320 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL23-32-J11.>gb:AK176439_1818427 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL24-19-N14.>gb:AK176861_1818849 Arabidopsis
           thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL25-41-O05.
          Length = 56

 Score =  120 bits (300), Expect = 1e-26
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           MGHSN+WN+HPK YGPGSR CRVCGNSHG+IRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56



>gb:AK175731_1817719 Arabidopsis thaliana mRNA for ribosomal S29
           subunit, complete cds, clone:
           RAFL22-27-J17.>gb:AK175819_1817807 Arabidopsis thaliana
           mRNA for ribosomal S29 subunit, complete cds, clone:
           RAFL22-41-I17.>gb:AK176070_1818058 Arabidopsis thaliana
           mRNA for ribosomal S29 subunit, complete cds, clone:
           RAFL22-81-B04.
          Length = 56

 Score =  117 bits (294), Expect = 6e-26
 Identities = 49/56 (87%), Positives = 52/56 (92%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           MGHSN+WN+HPK YGPGSR CRVCGNSHG+IRKYGL CCRQCFRS AKEIGFIKYR
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSKAKEIGFIKYR 56



>gb:AY846831_1630732 Triticum aestivum ribosomal protein S29 mRNA,
           complete cds.
          Length = 56

 Score =  117 bits (293), Expect = 8e-26
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           MGHSN+WN+HPK YG GSR CRVCGNSHG+IRKYGLMCCRQCFRS+AK+IGFIKYR
Sbjct: 1   MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56



>gb:AK176815_1818803 Arabidopsis thaliana mRNA for ribosomal S29
           subunit, complete cds, clone: RAFL25-36-M09.
          Length = 56

 Score =  115 bits (289), Expect = 2e-25
 Identities = 49/56 (87%), Positives = 52/56 (92%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           MGHSN+WN+HPK YGPGSR CRVCGNSHG+IRKYGL C RQCFRSNAKEIGFIKYR
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCYRQCFRSNAKEIGFIKYR 56



>gb:AY389605_1178240 Hyacinthus orientalis ribosomal protein S29
           (RPS29) mRNA, partial cds.
          Length = 73

 Score = 97.8 bits (242), Expect = 6e-20
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           P +YGPGSR CRVCGN HG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 28  PSSYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 73



>sp|Q7XYB0|RS29_GRIJA 40S ribosomal protein S29.>gb:AF517851_1807653
           Griffithsia japonica isolate Gj569 ribosome protein S29
           mRNA, complete cds.
          Length = 56

 Score = 96.7 bits (239), Expect = 1e-19
 Identities = 38/56 (67%), Positives = 46/56 (82%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           MGH NIW +HP+ YG GSR+C++CGN HG+IRKY +  CRQCFR  AK+IGFIKYR
Sbjct: 1   MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56



>gb:AF542029_1810004 Griffithsia japonica ribosomal S29-like protein
           mRNA, complete cds.
          Length = 56

 Score = 92.4 bits (228), Expect = 3e-18
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           MGH N+W +HPK+YG GSR CRVC +  GIIRKYGL  CR+CFR NA  IGF+KYR
Sbjct: 1   MGHENVWGSHPKSYGKGSRCCRVCASRIGIIRKYGLDICRRCFRENAVNIGFVKYR 56



>pir|C90120|C90120 40S ribosomal protein S29A [imported] -
           Guillardia theta nucleomorph>gb:AF083031_1766724
           Guillardia theta nucleomorph chromosome 3, complete
           sequence.
          Length = 56

 Score = 90.1 bits (222), Expect = 1e-17
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H NIWN H +TYG GSR CR+CGN  G+IRKYGL  CRQCFR  ++ +GF KYR
Sbjct: 1   MSHKNIWNKHSRTYGKGSRGCRICGNRSGLIRKYGLSICRQCFREKSQNLGFDKYR 56



>gb:AY264807_1314122 Branchiostoma belcheri tsingtaunese ribosomal
           protein S29 mRNA, complete cds.
          Length = 56

 Score = 88.6 bits (218), Expect = 4e-17
 Identities = 37/54 (68%), Positives = 42/54 (77%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG +N+W +HP+ YGPGSR CRVC N HGIIRKYGL  CRQCFR  A +IGF K
Sbjct: 1   MGFANVWYSHPRKYGPGSRYCRVCSNHHGIIRKYGLNMCRQCFRQYANDIGFKK 54



>gb:AB180417_1202435 Plutella xylostella mRNA for Ribosomal protein
           S29, complete cds.
          Length = 56

 Score = 88.2 bits (217), Expect = 5e-17
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MGH+NIW +HP+ YG GSR+CR C N HG+IRKYGL  CRQCFR  A +IGF K
Sbjct: 1   MGHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54



>sp|Q8WQI3|RS29_SPOFR 40S ribosomal protein S29.>gb:AY072293_1295914
           Spodoptera frugiperda ribosomal protein S29 mRNA,
           complete cds.
          Length = 56

 Score = 87.8 bits (216), Expect = 7e-17
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MGH+NIW +HP+ YG GSR+CR C N HG+IRKYGL  CRQCFR  A +IGF K
Sbjct: 1   MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54



>gb:AY769345_1350496 Bombyx mori ribosomal protein S29 (RpS29) mRNA,
           complete cds.
          Length = 56

 Score = 87.0 bits (214), Expect = 1e-16
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MGH+NIW +HP+ YG GSR+CR C N HG+IRKYGL  CRQCFR  A +IGF K
Sbjct: 1   MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54



>sp|Q9C2P2|RS29_NEUCR 40S ribosomal protein S29.>gb:NC17E5_1688369
           Neurospora crassa DNA linkage group V Cosmid contig
           17E5.
          Length = 56

 Score = 86.7 bits (213), Expect = 1e-16
 Identities = 35/56 (62%), Positives = 44/56 (78%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H ++WN+ P+TYG GSR+CRVC +S G+IRKYGL  CRQCFR  A +IGF K+R
Sbjct: 1   MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR 56



>gb:AY561513_2537703 Danio rerio ribosomal protein S29 (rps29) mRNA,
           complete cds.
          Length = 56

 Score = 86.3 bits (212), Expect = 2e-16
 Identities = 35/54 (64%), Positives = 43/54 (79%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MGH  ++ +HP+ YG GSR+CRVC N HG+IRKYGL  CRQCFR  AK+IGF+K
Sbjct: 1   MGHQQLYWSHPRKYGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54



>gb:AE016818_1748200 Ashbya gossypii (= Eremothecium gossypii) ATCC
           10895 chromosome V, complete sequence.
          Length = 56

 Score = 85.9 bits (211), Expect = 3e-16
 Identities = 35/56 (62%), Positives = 41/56 (73%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H N+W +HP+ YG GSR CRVC +  G+IRKYGL  CRQCFR  A +IGF KYR
Sbjct: 1   MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56



>pir|S30298|S30298 ribosomal protein S29, cytosolic [validated] -
           rat>pir|S55919|S55919 ribosomal protein S29, cytosolic -
           human>pir|S71578|S71578 ribosomal protein S29 -
           mouse>gb:AK002939_1151552 Mus musculus adult male brain
           cDNA, RIKEN full-length enriched library,
           clone:0710001C23 product:ribosomal protein S29, full
           insert sequence.>gb:AK012285_1156875 Mus musculus 11
           days embryo whole body cDNA, RIKEN full-length enriched
           library, clone:2700023N07 product:ribosomal protein S29,
           full insert sequence.>gb:CR859397_1183515 Pongo pygmaeus
           mRNA; cDNA DKFZp468N1517 (from clone
           DKFZp468N1517).>gb:BTU66372_1437719 Bos taurus ribosomal
           protein S29 mRNA, complete cds.>gb:AB061847_1868823 Homo
           sapiens RPS29 gene for ribosomal protein S29, complete
           cds and sequence.>gb:BC032813_1980694 Homo sapiens
           ribosomal protein S29, mRNA (cDNA clone MGC:44919
           IMAGE:5217083), complete cds.>gb:BC035313_1981535 Homo
           sapiens ribosomal protein S29, mRNA (cDNA clone MGC:9279
           IMAGE:3868721), complete cds.>gb:HSU14973_2022411 Human
           ribosomal protein S29 mRNA, complete
           cds.>gb:HUMS29RP_2036466 Homo sapiens (clone cori-1cl5)
           S29 ribosomal protein mRNA, complete
           cds.>gb:BC024393_2094475 Mus musculus ribosomal protein
           S29, mRNA (cDNA clone MGC:36183 IMAGE:4986748), complete
           cds.>gb:BC051203_2100680 Mus musculus ribosomal protein
           S29, mRNA (cDNA clone MGC:62916 IMAGE:1476903), complete
           cds.>gb:BC058150_2103066 Rattus norvegicus ribosomal
           protein S29, mRNA (cDNA clone MGC:72902 IMAGE:6922365),
           complete cds.>gb:MUSS29RP_2129936 Mus musculus (clone
           mcori-1ck9) S29 ribosomal protein mRNA, complete
           cds.>gb:RNRPS29_2136387 R.norvegicus gene for ribosomal
           protein S29.
          Length = 56

 Score = 85.1 bits (209), Expect = 4e-16
 Identities = 35/54 (64%), Positives = 43/54 (79%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MGH  ++ +HP+ +G GSR+CRVC N HG+IRKYGL  CRQCFR  AK+IGFIK
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54



>gb:AF402840_2492086 Ictalurus punctatus 40S ribosomal protein S29
           mRNA, complete cds.>gb:AY357068_2529431 Hippocampus
           comes 40S ribosomal protein S29 mRNA, complete cds.
          Length = 56

 Score = 84.7 bits (208), Expect = 6e-16
 Identities = 34/54 (62%), Positives = 43/54 (79%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MGH  ++ +HP+ +G GSR+CRVC N HG+IRKYGL  CRQCFR  AK+IGF+K
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54



>gb:AY829792_1180191 Lonomia obliqua ribosomal protein 8 mRNA,
           complete cds.
          Length = 56

 Score = 84.3 bits (207), Expect = 7e-16
 Identities = 35/54 (64%), Positives = 41/54 (75%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MGH+NIW +HP+ Y  GSR+CR C N HG+IRKYGL  CRQCFR  A +IGF K
Sbjct: 1   MGHANIWYSHPRRYCQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54



>gb:U80953_1406521 Caenorhabditis elegans cosmid B0412, complete
           sequence.
          Length = 56

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 33/54 (61%), Positives = 42/54 (77%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG  N+W +HP+ +GPGSR+CRVC   HG+IRKYGL  CR+CFR  A++IGF K
Sbjct: 1   MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKK 54



>pir|S48503|S48503 ribosomal protein S29.e.A, cytosolic - yeast
           (Saccharomyces cerevisiae)>gb:YSCL8084_1729521
           Saccharomyces cerevisiae chromosome XII cosmid
           8084.>gb:YSCYS29A_1730933 S.cerevisiae YS29A gene for
           ribosomal protein YS29, complete cds.
          Length = 56

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 34/56 (60%), Positives = 41/56 (73%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H N+W +HP+ YG GSR CRVC +  G+IRKYGL  CRQCFR  A +IGF K+R
Sbjct: 1   MAHENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 56



>pir|T25449|T25449 hypothetical protein B0412.4 - Caenorhabditis
           elegans
          Length = 88

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 33/54 (61%), Positives = 42/54 (77%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG  N+W +HP+ +GPGSR+CRVC   HG+IRKYGL  CR+CFR  A++IGF K
Sbjct: 8   MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKK 61



>sp|Q9NB51|RS29_CULQU 40S ribosomal protein S29.>gb:AF266749_1257314
           Culex pipiens quinquefasciatus ribsomal protein S29
           mRNA, complete cds.
          Length = 56

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG +++W +HP+ YG GSR CR C N+HG+IRKYGL  CRQCFR  AK+IGF K
Sbjct: 1   MGFADLWYSHPRKYGQGSRFCRACSNNHGMIRKYGLNICRQCFREYAKDIGFRK 54



>sp|P62276|RS29_BOVIN 40S ribosomal protein
           S29.>sp|P62273|RS29_HUMAN 40S ribosomal protein
           S29.>sp|P62274|RS29_MOUSE 40S ribosomal protein
           S29.>sp|P62275|RS29_RAT 40S ribosomal protein S29.
          Length = 55

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = +1

Query: 64  GHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           GH  ++ +HP+ +G GSR+CRVC N HG+IRKYGL  CRQCFR  AK+IGFIK
Sbjct: 1   GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53



>sp|Q90YP2|RS29_ICTPU 40S ribosomal protein S29.
          Length = 55

 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 33/53 (62%), Positives = 42/53 (79%)
 Frame = +1

Query: 64  GHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           GH  ++ +HP+ +G GSR+CRVC N HG+IRKYGL  CRQCFR  AK+IGF+K
Sbjct: 1   GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 53



>gb:AC116920_1206386 Dictyostelium discoideum chromosome 2 map
           4415041-4520361 strain AX4, complete sequence.
          Length = 55

 Score = 81.6 bits (200), Expect = 5e-15
 Identities = 33/51 (64%), Positives = 40/51 (78%)
 Frame = +1

Query: 76  IWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           +W  HP+ +GPGSR CR CGN HGIIRKY L  CR+CFR++A+ IGF KYR
Sbjct: 5   LWLTHPRNFGPGSRTCRKCGNHHGIIRKYDLNMCRRCFRTDAEAIGFNKYR 55



>sp|P41057|R29A_YEAST 40S ribosomal protein S29-A (S36) (YS29).
          Length = 55

 Score = 81.6 bits (200), Expect = 5e-15
 Identities = 33/54 (61%), Positives = 40/54 (74%)
 Frame = +1

Query: 67  HSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           H N+W +HP+ YG GSR CRVC +  G+IRKYGL  CRQCFR  A +IGF K+R
Sbjct: 2   HENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 55



>gb:AY075533_1296323 Drosophila melanogaster RH06643 full insert
           cDNA.
          Length = 68

 Score = 81.3 bits (199), Expect = 6e-15
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG + +W +HP+ YG GSR CR C N HG+IRKYGL  CRQCFR  A +IGF K
Sbjct: 13  MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 66



>sp|Q9VH69|RS29_DROME 40S ribosomal protein S29.>gb:AE014297_1138753
           Drosophila melanogaster chromosome 3R, complete
           sequence.>gb:AY232060_1177353 Drosophila yakuba clone
           yak-ad_CG8495 mRNA sequence.>gb:AE003684_1220746
           Drosophila melanogaster chromosome 3R, section 22 of 118
           of the complete sequence.
          Length = 56

 Score = 81.3 bits (199), Expect = 6e-15
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG + +W +HP+ YG GSR CR C N HG+IRKYGL  CRQCFR  A +IGF K
Sbjct: 1   MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54



>gb:CR380950_1649688 Candida glabrata strain CBS138 chromosome D
           complete sequence.
          Length = 56

 Score = 80.9 bits (198), Expect = 8e-15
 Identities = 33/56 (58%), Positives = 40/56 (71%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H N+W +HP+ +G GSR CRVC +  G+IRKY L  CRQCFR  A +IGF KYR
Sbjct: 1   MAHENVWFSHPRRFGKGSRQCRVCSSHTGLIRKYDLNICRQCFRERASDIGFNKYR 56



>gb:AGA439060_1281905 Anopheles gambiae DNA from 2R chromosome,
           clone 11N17.
          Length = 56

 Score = 80.9 bits (198), Expect = 8e-15
 Identities = 34/54 (62%), Positives = 41/54 (75%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG +N+W +HP+ YG GSR  R C N+HG+IRKYGL  CRQCFR  AK+IGF K
Sbjct: 1   MGFANLWYSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRK 54



>gb:AY550074_1431349 Sus scrofa 40S ribosomal protein S29 mRNA,
           complete cds.
          Length = 56

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 34/54 (62%), Positives = 41/54 (75%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG    + +HP+ +G GSR+CRVC N HG+IRKYGL  CRQCFR  AK+IGFIK
Sbjct: 1   MGPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54



>pir|S48504|S48504 ribosomal protein S29.e.B, cytosolic - yeast
           (Saccharomyces cerevisiae)>gb:SCYDL061C_1711626
           S.cerevisiae chromosome IV reading frame ORF
           YDL061c.>gb:YSCYS29B_1730934 S.cerevisiae YS29B gene for
           ribosomal protein YS29, complete cds.
          Length = 56

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 32/56 (57%), Positives = 40/56 (71%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H N+W +HP+ +G GSR CRVC +  G++RKY L  CRQCFR  A +IGF KYR
Sbjct: 1   MAHENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 56



>sp|P41058|R29B_YEAST 40S ribosomal protein S29-B (S36) (YS29).
          Length = 55

 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +1

Query: 67  HSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           H N+W +HP+ +G GSR CRVC +  G++RKY L  CRQCFR  A +IGF KYR
Sbjct: 2   HENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 55



>gb:CR382133_1666798 Debaryomyces hansenii chromosome A of strain
           CBS767 of Debaryomyces hansenii.
          Length = 56

 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H ++W +HP+ +G GSR CRVC +  G+IRKY L  CRQCFR  A +IGF K+R
Sbjct: 1   MAHESVWFSHPRNFGKGSRQCRVCSSHSGLIRKYDLNICRQCFRERASDIGFNKFR 56



>gb:CR382128_1660691 Yarrowia lipolytica chromosome B of strain
           CLIB99 of Yarrowia lipolytica.
          Length = 78

 Score = 75.9 bits (185), Expect = 3e-13
 Identities = 31/56 (55%), Positives = 38/56 (67%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H NIW +HP+ YG G R CR+  N + +IRKYGL  CRQ FR  A +IGF K+R
Sbjct: 23  MAHENIWFSHPRHYGKGGRKCRITNNQNAVIRKYGLNLCRQSFREKAADIGFTKFR 78



>gb:CR382125_1657439 Kluyveromyces lactis strain NRRL Y-1140
           chromosome E of strain NRRL Y-1140 of Kluyveromyces
           lactis.
          Length = 56

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H N+W +HP+ +G GSR CR+ G+  G+IRKYGL   RQ FR  A +IGF KYR
Sbjct: 1   MAHENVWYSHPRKFGKGSRQCRISGSHSGLIRKYGLNIDRQSFREKANDIGFYKYR 56



>gb:AB002777_1192798 Entamoeba histolytica mRNA for ribosomal
           protein S29, complete cds.
          Length = 56

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 33/54 (61%), Positives = 38/54 (70%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG  +I+NAHP+ YG GSR CR CG   G+IRKYGL  CR+C R  A EIGF K
Sbjct: 1   MGSYSIYNAHPRNYGNGSRTCRKCGARKGLIRKYGLDLCRRCLREKAVEIGFQK 54



>pir|T39525|T39525 40s ribosomal protein S14 type - fission yeast
           (Schizosaccharomyces pombe)>gb:SPBC1685_1719089 S.pombe
           chromosome II cosmid c1685.
          Length = 56

 Score = 71.6 bits (174), Expect = 5e-12
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           M H N+W +HP+ YG GSR C   G   G+IRKYGL   RQ FR  A +IGF+KYR
Sbjct: 1   MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 56



>gb:AE017343_1755671 Cryptococcus neoformans var. neoformans JEC21
           chromosome 3, complete sequence.
          Length = 54

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 31/55 (56%), Positives = 38/55 (69%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           M HSN+W + P+ YG GSR CR+C +  G+IR  GL  CRQCFR  +K IGF KY
Sbjct: 1   MAHSNVWFSRPRNYGKGSRQCRLCAHQAGLIR--GLDLCRQCFREKSKVIGFDKY 53



>sp|O74329|RS29_SCHPO 40S ribosomal protein S29.
          Length = 55

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 30/54 (55%), Positives = 36/54 (66%)
 Frame = +1

Query: 67  HSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           H N+W +HP+ YG GSR C   G   G+IRKYGL   RQ FR  A +IGF+KYR
Sbjct: 2   HENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 55



>gb:CR548612_1375376 Paramecium tetraurelia macronuclear largest
           chromosome, complete sequence.
          Length = 55

 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +1

Query: 70  SNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           ++++  HP+TYG  SR CRVC    G+IRKYG+  CR+CFR N + IGF KY
Sbjct: 3   NHLFRTHPRTYGKDSRECRVCAARQGLIRKYGMNVCRRCFRENYELIGFHKY 54



>gb:AF486840_1276108 Aplysia californica 40S ribosomal protein S29
           mRNA, complete cds.
          Length = 56

 Score = 68.2 bits (165), Expect = 5e-11
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = +1

Query: 61  MGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           MG +    +HP+ +GPGSR CRVC NS  IIRKYGL  CR+CF   + +IGF K
Sbjct: 1   MGFTTTXYSHPRRFGPGSRCCRVCNNSPCIIRKYGLNICRRCFXQYSDDIGFKK 54



>gb:AE010413_262854 Methanopyrus kandleri AV19 section 112 of 157 of
           the complete genome.>gb:AE009439_903635 Methanopyrus
           kandleri AV19, complete genome.
          Length = 48

 Score = 65.5 bits (158), Expect = 4e-10
 Identities = 25/44 (56%), Positives = 36/44 (81%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           + +G G+R CR CG++HG+I+KYG+M CRQCFR  A+++GF KY
Sbjct: 4   REFGKGARRCRRCGDTHGVIQKYGIMLCRQCFREVAEKMGFKKY 47



>gb:AY714845_1189525 Uncultured archaeon GZfos27B6 clone GZfos27B6,
           *** SEQUENCING IN PROGRESS ***.
          Length = 51

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           K +G G+  CR CG   G++RKYG+  CRQCFR  A+EIGF KY
Sbjct: 7   KRFGRGANTCRRCGRKRGLVRKYGIYLCRQCFREIAREIGFKKY 50



>sp|O26125|RS14_METTH 30S ribosomal protein S14P.>pir|C69094|C69094
           ribosomal protein S14 - Methanobacterium
           thermoautotrophicum (strain Delta H)>gb:AE000795_27722
           Methanobacterium thermoautotrophicum from bases 1 to
           10208 (section 1 of 148) of the complete
           genome.>gb:AE000666_924804 Methanobacterium
           thermoautotrophicum str. Delta H complete genome.
          Length = 50

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           P+ YG  SR C  CG+   ++R+YGLM CRQCFR  A +IGF KY
Sbjct: 5   PRKYGKASRKCSRCGDHSALVRRYGLMLCRQCFRELAPKIGFKKY 49



>sp|O28368|RS14_ARCFU 30S ribosomal protein S14P.>pir|F69488|F69488
           SSU ribosomal protein S14P (rps14P) homolog -
           Archaeoglobus fulgidus>gb:AE000971_30003 Archaeoglobus
           fulgidus DSM 4304 section 136 of 172 of the complete
           genome.>gb:AE000782_975787 Archaeoglobus fulgidus DSM
           4304 complete genome.
          Length = 51

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 25/44 (56%), Positives = 29/44 (65%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           K +G G+  CR CG   G+IR YGL  CRQCFR  A E+GF KY
Sbjct: 7   KVFGRGANECRRCGRRRGLIRMYGLYLCRQCFREVASELGFKKY 50



>gb:BX957222_844666 Methanococcus maripaludis S2 complete genome;
           segment 4/5.
          Length = 53

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = +1

Query: 100 YGPGSRACRVCGNSH-GIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           YG GS+ C+ CG    GIIRKYGL  CRQCFR  A ++GF KY
Sbjct: 10  YGQGSKVCKRCGRKGPGIIRKYGLNLCRQCFRELAPKLGFKKY 52



>sp|Q97ZQ5|RS14_SULSO 30S ribosomal protein S14P.>pir|F90218|F90218
           SSU ribosomal protein S14AB (rps14AB) [imported] -
           Sulfolobus solfataricus>gb:AE006696_221603 Sulfolobus
           solfataricus P2 section 55 of 272 of the complete
           genome.>gb:AE006641_1107451 Sulfolobus solfataricus P2,
           complete genome.
          Length = 57

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 22/44 (50%), Positives = 31/44 (70%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           + YG G ++C+ CG+   +I+KYG+  CRQCFR  A E+GF KY
Sbjct: 13  RKYGKGVQSCQRCGSKDSVIQKYGIYLCRQCFREVAYELGFRKY 56



>sp|P14041|RS14_METVA 30S ribosomal protein S14P.>pir|S05618|R3MX14
           ribosomal protein S14 - Methanococcus
           vannielii>gb:MVRPOP_151780 Methanococcus vanelli DNA for
           transcriptional unit for ribosomal proteins.
          Length = 53

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = +1

Query: 100 YGPGSRACRVCGNSH-GIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           YG GS+ C+ CG    GIIRKYGL  CRQCFR  A ++GF KY
Sbjct: 10  YGQGSKVCKRCGRKGPGIIRKYGLDLCRQCFRELAPKLGFKKY 52



>sp|Q975J4|RS14_SULTO 30S ribosomal protein S14P.>gb:BA000023_690989
           Sulfolobus tokodaii str. 7 DNA, complete genome.
          Length = 57

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           + YG G + CR CG+   +I+KYGL  CRQCFR  A E+GF K R
Sbjct: 13  RKYGRGVQVCRRCGSRDSVIQKYGLYLCRQCFREVAYEMGFKKTR 57



>gb:AE017199_403058 Nanoarchaeum equitans Kin4-M, complete genome.
          Length = 69

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           + +G G+R C  CG   GIIR+YGL  C+ CF+  A E+GF K+
Sbjct: 24  RKFGKGARRCERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFKW 67



>gb:AY534910_626212 Uncultured marine group II euryarchaeote
           DeepAnt-JyKC7 clone cosmid DeepAnt-JyKC7, complete
           sequence.
          Length = 50

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 23/38 (60%), Positives = 26/38 (68%)
 Frame = +1

Query: 112 SRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           S  CR CG   G+IR++GL  CRQCFR  A EIGF KY
Sbjct: 12  SNGCRRCGRKRGMIRRHGLRLCRQCFRDIAPEIGFKKY 49



>sp|P58731|RS14_AERPE 30S ribosomal protein S14P.
          Length = 54

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           PK  G G++ C+ CG    +I+KYGL  CRQCFR  A  +GF K R
Sbjct: 9   PKRMGRGAQRCQRCGTRDAVIQKYGLYLCRQCFREIAPTLGFRKNR 54



>gb:AP006878_576679 Thermococcus kodakaraensis strain KOD1 DNA,
           complete genome.
          Length = 56

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 23/45 (51%), Positives = 29/45 (64%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           P+ +G G+R C  CG    IIR +GLM CR CFR  A ++GF KY
Sbjct: 11  PRKFGKGARRCMRCGQYGPIIRIHGLMLCRHCFREVAPKLGFKKY 55



>sp|Q97BW2|RS14_THEVO 30S ribosomal protein S14P.>gb:BA000011_664785
           Thermoplasma volcanium GSS1 DNA, complete genome.
          Length = 53

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           C  CG   GI+RKYGL  CRQCFR  A+++GF KY
Sbjct: 18  CVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEKY 52



>gb:BT001305_1356078 Drosophila melanogaster AT13329 full insert
           cDNA.
          Length = 43

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 22/33 (66%), Positives = 24/33 (72%)
 Frame = +1

Query: 124 RVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           R C N HG+IRKYGL  CRQCFR  A +IGF K
Sbjct: 9   RACSNRHGLIRKYGLNICRQCFREYANDIGFKK 41



>gb:AE014297_1138754 Drosophila melanogaster chromosome 3R, complete
           sequence.>gb:AE003684_1220747 Drosophila melanogaster
           chromosome 3R, section 22 of 118 of the complete
           sequence.
          Length = 55

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 22/33 (66%), Positives = 24/33 (72%)
 Frame = +1

Query: 124 RVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           R C N HG+IRKYGL  CRQCFR  A +IGF K
Sbjct: 21  RACSNRHGLIRKYGLNICRQCFREYANDIGFKK 53



>sp|P62012|RS14_PYRAB 30S ribosomal protein
           S14P.>sp|P62013|RS14_PYRHO 30S ribosomal protein
           S14P.>pir|B75146|B75146 ssu ribosomal protein s14p
           (rps14p) PAB7080 - Pyrococcus abyssi (strain
           Orsay)>pir|H71185|H71185 probable ribosomal protein S14
           - Pyrococcus horikoshii>gb:BA000001_650441 Pyrococcus
           horikoshii OT3 DNA, complete genome.>gb:CNSPAX02_849088
           Pyrococcus abyssi complete genome; segment 2/6.
          Length = 56

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 23/45 (51%), Positives = 29/45 (64%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           P+ +G G+R C  CG    IIR +GLM CR CFR  A ++GF KY
Sbjct: 11  PRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKY 55



>sp|P54110|RS14_METJA 30S ribosomal protein S14P.
          Length = 53

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGN-SHGIIRKYGLMCCRQCFRSNAKEIGFIK 222
           K YG G R C+ CG+   G+IRKYGL  CRQCFR  A ++GF K
Sbjct: 8   KKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKK 51



>sp|Q9HIS1|RS14_THEAC 30S ribosomal protein S14P.>gb:TACID5_197011
           Thermoplasma acidophilum complete genome; segment 5/5.
          Length = 53

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           C  CG   GI+R+YGL  CRQCFR  A+++GF KY
Sbjct: 18  CVRCGRKRGIVRRYGLHLCRQCFRETARQLGFEKY 52



>gb:AE010775_266447 Methanosarcina acetivorans str. C2A, section 120
           of 534 of the complete genome.>gb:AE010299_907006
           Methanosarcina acetivorans str. C2A, complete genome.
          Length = 50

 Score = 50.8 bits (120), Expect = 9e-06
 Identities = 21/44 (47%), Positives = 26/44 (59%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           K  G G   C+ CG   G++RKY +  CR CFR  A E+GF KY
Sbjct: 6   KKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKY 49



>gb:AE010278_261377 Pyrococcus furiosus DSM 3638, section 153 of 173
           of the complete genome.>gb:AE009950_902158 Pyrococcus
           furiosus DSM 3638, complete genome.
          Length = 56

 Score = 50.8 bits (120), Expect = 9e-06
 Identities = 23/45 (51%), Positives = 28/45 (62%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           P+ +G G+R C  CG    IIR  GLM CR CFR  A ++GF KY
Sbjct: 11  PRKFGKGARRCIRCGQYGPIIRIQGLMLCRHCFREVAPKLGFRKY 55



>gb:CNS07EGB_1373083 chromosome IV of strain GB-M1 of
           Encephalitozoon cuniculi (Microspora).
          Length = 55

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 25/48 (52%), Positives = 31/48 (64%)
 Frame = +1

Query: 82  NAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           ++H K +G GSR+C  C    GIIRK  LM CR+CFR  A +IGF  Y
Sbjct: 9   HSHRKPFGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIY 54



>gb:AE017261_419671 Picrophilus torridus DSM 9790, complete genome.
          Length = 48

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 19/35 (54%), Positives = 24/35 (68%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           C  CG   G++R+YG+  CRQCFR  A +IGF KY
Sbjct: 13  CVRCGRKRGLVRRYGIRMCRQCFRETANQIGFRKY 47



>sp|Q8ZVW1|RS14_PYRAE 30S ribosomal protein S14P.>gb:AE009857_256568
           Pyrobaculum aerophilum strain IM2 section 112 of 201 of
           the complete genome.>gb:AE009441_899194 Pyrobaculum
           aerophilum strain IM2 complete genome.
          Length = 54

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 21/44 (47%), Positives = 26/44 (59%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           + YG     C  CG    +IRKYGL  CR+CFR  A ++GF KY
Sbjct: 10  RPYGKSKIRCLRCGTREAVIRKYGLYLCRRCFREVAPQLGFKKY 53



>gb:AE013454_292468 Methanosarcina mazei strain Goe1, section 236 of
           379 of the complete genome.>gb:AE008384_966577
           Methanosarcina mazei strain Goe1, complete genome.
          Length = 50

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +1

Query: 103 GPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           G G   C+ CG   G++RKY +  CR CFR  A E+GF KY
Sbjct: 9   GRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKY 49



>sp|O05635|RS14_SULAC 30S ribosomal protein
           S14P.>gb:SSSPCOPER_191030 S.acidocaldarius DNA for spc
           operon.
          Length = 54

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = +1

Query: 94  KTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 228
           + +G G + C+ CG+   +++KYGL  CRQCFR  A  +GF K R
Sbjct: 10  RRFGKGVQLCKRCGSRDSVMQKYGLYLCRQCFREVAYPMGFRKTR 54



>sp|Q9HPC0|RS14_HALN1 30S ribosomal protein S14P.>pir|B84323|B84323
           30S ribosomal protein S14P [imported] - Halobacterium
           sp. NRC-1>gb:AE005077_63110 Halobacterium sp. NRC-1
           section 108 of 170 of the complete
           genome.>gb:AE004437_888029 Halobacterium sp. NRC-1
           complete genome.
          Length = 52

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           CR CG   G++ KY +  CRQCFR  A+ +GF KY
Sbjct: 17  CRRCGREQGLVGKYDIWLCRQCFREIARSMGFKKY 51



>gb:AB007165_1863931 Homo sapiens gene for ribosomal protein S29,
           partial cds.
          Length = 26

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +1

Query: 145 GIIRKYGLMCCRQCFRSNAKEIGFIK 222
           G+IRKYGL  CRQCFR  AK+IGFIK
Sbjct: 1   GLIRKYGLNMCRQCFRQYAKDIGFIK 26



>pir|T07168|T07168 hypothetical 14.3K protein -
           tomato>gb:LES16127_1684473 Lycopersicon esculentum mRNA
           for hypothetical protein.
          Length = 127

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 26/56 (46%), Positives = 29/56 (51%)
 Frame = +2

Query: 74  TSGTLTLRPMDLDHAHAVCVGILMELSEXXXXXXXXXXXXXMPKKSGS*STANGLK 241
           TSGTLT R   L  AHAVCV ILM+L E             MP+K  S ST   L+
Sbjct: 5   TSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLE 60



>sp|P26816|RS14_HALMA 30S ribosomal protein S14P
           (HmaS14).>pir|S16536|S16536 ribosomal protein S14
           [similarity] - Haloarcula marismortui>gb:HMRIBOS_137319
           H.marismortui genes HmaL5, HmaS14, HmaS8, HmaL6, HL5,
           HL24, HmaL18, HmaS5, HmaL30, and HmaL15 for ribosomal
           proteins.
          Length = 61

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 118 ACRVCGNSHGIIRKYGLMCCRQCFRSNAKEIGFIKY 225
           +C+ CG   G++ KY +  CRQCFR  ++ +GF KY
Sbjct: 25  SCQRCGREQGLVGKYDIWLCRQCFREISRGMGFRKY 60



>sp|Q97EJ1|RS14_CLOAB 30S ribosomal protein S14.>pir|H97283|H97283
           ribosomal protein S14 [imported] - Clostridium
           acetobutylicum>gb:AE007808_230420 Clostridium
           acetobutylicum ATCC 824 section 296 of 356 of the
           complete genome.>gb:AE001437_1093375 Clostridium
           acetobutylicum ATCC 824, complete genome.
          Length = 61

 Score = 40.0 bits (92), Expect = 0.016
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 79  WNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           W   PK        C++CG  H +++KYG+  CR CFR  A
Sbjct: 10  WKKEPKYSTRAYTRCKICGRPHSVLKKYGI--CRICFRELA 48



>sp|Q8XHT6|RS14_CLOPE 30S ribosomal protein S14.>gb:BA000016_675432
           Clostridium perfringens str. 13 DNA, complete genome.
          Length = 61

 Score = 38.9 bits (89), Expect = 0.035
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 79  WNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           W   PK        CR+CG  H +++K+G+  CR CFR  A
Sbjct: 10  WKKEPKYKTRAYTRCRLCGRPHSVLKKFGI--CRICFRELA 48



>gb:AE017308_437870 Mycoplasma mobile 163K complete genome.
          Length = 61

 Score = 36.2 bits (82), Expect = 0.23
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 88  HPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           HPK        C++CG    ++RKY +  CR CFR  A E
Sbjct: 13  HPKYSARAYTRCQICGRPQAVLRKYKI--CRICFRKLAHE 50



>pir|S02844|R3YM14 ribosomal protein S14 - Mycoplasma
           capricolum>gb:MCRPCLUS_143187 Mycoplasma capricolum
           ribosomal protein gene cluster.
          Length = 61

 Score = 35.8 bits (81), Expect = 0.30
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 88  HPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           HPK        C  CG  H +++K+G+  CR CFR  A E
Sbjct: 13  HPKFNVRNYTRCNHCGRPHAVLKKFGI--CRLCFRKFAYE 50



>sp|P10130|RS14_MYCCA 30S ribosomal protein S14.
          Length = 60

 Score = 35.8 bits (81), Expect = 0.30
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 88  HPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           HPK        C  CG  H +++K+G+  CR CFR  A E
Sbjct: 13  HPKFNVRNYTRCNHCGRPHAVLKKFGI--CRLCFRKFAYE 50



>gb:BX294146_769408 Pirellula sp. strain 1 complete genome; segment
           14/24.
          Length = 61

 Score = 34.7 bits (78), Expect = 0.66
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           PK        C+ CG    + RK+GL  CR CFR NA
Sbjct: 14  PKFSTRKENRCKFCGRPRSVYRKFGL--CRICFRENA 48



>sp|Q9ZJS5|RS14_HELPJ 30S ribosomal protein S14.>pir|B71834|B71834
           ribosomal protein S14 - Helicobacter pylori (strain
           J99)>gb:AE001547_36217 Helicobacter pylori, strain J99
           section 108 of 132 of the complete
           genome.>gb:AE001439_884987 Helicobacter pylori, strain
           J99 complete genome.
          Length = 61

 Score = 34.7 bits (78), Expect = 0.66
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           CR+CG  H + R +GL  CR C R  A E
Sbjct: 24  CRICGRPHSVYRDFGL--CRVCLRKMASE 50



>gb:AE014295_312252 Bifidobacterium longum NCC2705, complete genome.
          Length = 61

 Score = 34.3 bits (77), Expect = 0.87
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           C+VCG  H + RK+GL  CR C R  A
Sbjct: 24  CQVCGRPHSVYRKFGL--CRICLREKA 48



>gb:AE017332_445461 Mycoplasma hyopneumoniae 232, complete genome.
          Length = 61

 Score = 33.9 bits (76), Expect = 1.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 82  NAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFR 192
           N  PK        C++CG SH ++RK+ +  CR CFR
Sbjct: 11  NRAPKFKVRAYTRCQLCGRSHSVLRKFRI--CRICFR 45



>gb:AE015945_321646 Clostridium tetani E88, section 10 of 10 of the
           complete genome.>gb:AE015927_964435 Clostridium tetani
           E88, complete genome.
          Length = 172

 Score = 33.9 bits (76), Expect = 1.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 55  VVMGHSNIWNAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRS 195
           ++ G  +  N  P+       AC+ CGNS+   ++ GL  C QC+++
Sbjct: 57  LLSGLMDYMNGSPEKTSVNIEACKKCGNSYLEFKEKGLAGCSQCYKN 103



>gb:BA000026_694350 Mycoplasma penetrans HF-2 DNA, complete genome.
          Length = 61

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 88  HPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           HPK        C  CG    +IRK+G+  CR CFR  A
Sbjct: 13  HPKFKVRAYTRCERCGRPRAVIRKFGI--CRLCFRDLA 48



>gb:AP006840_570248 Symbiobacterium thermophilum DNA, complete
           genome.
          Length = 61

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           C++CG     +RK+GL  CR CFR  A E
Sbjct: 24  CKLCGRPRAYMRKFGL--CRHCFRKLAHE 50



>gb:AE017263_420688 Mesoplasma florum L1 complete genome.
          Length = 61

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           C  CG  H +++K+G+  CR CFR  A E
Sbjct: 24  CNNCGRPHAVLKKFGI--CRLCFRKYAYE 50



>gb:AE017248_415828 Treponema denticola ATCC 35405, section 3 of 10
           of the complete genome.>gb:AE017226_1069424 Treponema
           denticola ATCC 35405, complete genome.
          Length = 61

 Score = 33.1 bits (74), Expect = 1.9
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           C+VCG   G +RK+ +  CR CFR  A E
Sbjct: 24  CKVCGRPRGYLRKFKM--CRVCFRKLASE 50



>sp|Q98PZ5|RS14_MYCPU 30S ribosomal protein S14.>pir|F90583|F90583
           ribosomal protein S14 [imported] - Mycoplasma pulmonis
           (strain UAB CTIP)>gb:MPULM03_150087 Mycoplasma pulmonis
           (strain UAB CTIP) complete genome; segment 3/3.
          Length = 61

 Score = 33.1 bits (74), Expect = 1.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           C++CG  H ++RK+ +  CR CFR  A E
Sbjct: 24  CQLCGRPHAVLRKFEI--CRICFRKLAHE 50



>sp|P56021|RS14_HELPY 30S ribosomal protein S14.>pir|B64683|B64683
           ribosomal protein S14 - Helicobacter pylori (strain
           26695)>gb:AE000633_25469 Helicobacter pylori 26695
           section 111 of 134 of the complete
           genome.>gb:AE000511_880908 Helicobacter pylori 26695
           complete genome.
          Length = 61

 Score = 33.1 bits (74), Expect = 1.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           CR+CG  H + R +GL  CR C R    E
Sbjct: 24  CRICGRPHSVYRDFGL--CRVCLRKMGSE 50



>sp|Q9L0C7|R14A_STRCO 30S ribosomal protein
           S14-1.>gb:SCO939121_178387 Streptomyces coelicolor A3(2)
           complete genome; segment 18/29.>gb:BA000030_702826
           Streptomyces avermitilis MA-4680 genomic DNA, complete
           genome.
          Length = 61

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           PK    G   C+ CG  H + RK+GL  CR C R  A
Sbjct: 14  PKFGVRGYTRCQRCGRPHSVYRKFGL--CRVCLREMA 48



>gb:AY198133_596875 Spiroplasma kunkelii strain CR2-3x partial
           genome sequence.
          Length = 62

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 88  HPKTYGPGSRAC-RVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           HPK    G   C   CG  H ++RK+ L  CR CFR+ A +
Sbjct: 13  HPKFKVRGYTRCGNNCGRPHAVLRKFDL--CRLCFRNLASK 51



>gb:AP006618_557171 Nocardia farcinica IFM 10152 DNA, complete
           genome.
          Length = 61

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +1

Query: 82  NAHPKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           N  PK        C+ CG  H + RK+GL  CR C R  A
Sbjct: 11  NRKPKFAVRAYTRCQRCGRPHAVYRKFGL--CRVCLRDMA 48



>gb:AE017313_439567 Desulfovibrio vulgaris subsp. vulgaris str.
           Hildenborough, section 5 of 12 of the complete
           genome.>gb:AE017285_1072728 Desulfovibrio vulgaris
           subsp. vulgaris str. Hildenborough, complete genome.
          Length = 61

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 91  PKTYGPGSRACRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           PK        C +CG     +RK+GL  CR CFR+ A
Sbjct: 14  PKFSARAYNRCPICGRPRAYLRKFGL--CRICFRNMA 48



>gb:AE016967_369333 Mycoplasma gallisepticum strain R section 1 of 4
           of the complete genome.>gb:AE015450_1033982 Mycoplasma
           gallisepticum strain R complete genome.
          Length = 68

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFR 192
           C+ CG  H + RK+G+  CR CFR
Sbjct: 31  CKRCGRPHAVYRKFGI--CRLCFR 52



>gb:AE013171_289847 Thermoanaerobacter tengcongensis MB4, section
           198 of 244 of the complete genome.>gb:AE008691_1111912
           Thermoanaerobacter tengcongensis strain MB4, complete
           genome.
          Length = 61

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           C++CG     +RK+G+  CR CFR  A +
Sbjct: 24  CKICGRPRAYLRKFGM--CRLCFRKYAHQ 50



>sp|O52345|RS14_MYCGA 30S ribosomal protein S14.>gb:AF036708_471586
           Mycoplasma gallisepticum strain A5969var.B ribosomal
           proteins S10 (rps10), L3 (rpl3), L4 (rpl4), L23 (rpl23),
           L2 (rpl2), S19 (rps19), L22 (rpl22), S3 (rps3), L16
           (rpl16), L29 (rpl29), S17 (rps17), L14 (rpl14), L24
           (rpl24), L5 (rpl5), S14 (rps14), S8 (rps8), L6 (rpl6),
           L18 (rpl18), S5 (rps5), L15 (rpl15), secretion protein Y
           (secY), adenylate kinase (adk), methionine
           aminopeptidase (map), and lactate dehydrogenase (ldh)
           genes, complete cds; and rrn235 operon consisting of 23S
           (rrl) and 5S (rrf) ribosomal RNA genes, complete
           sequence.
          Length = 61

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFR 192
           C+ CG  H + RK+G+  CR CFR
Sbjct: 24  CKRCGRPHAVYRKFGI--CRLCFR 45



>gb:AE017328_444184 Listeria monocytogenes str. 4b F2365, section 7
           of 10 of the complete genome.>gb:AE017262_1076540
           Listeria monocytogenes str. 4b F2365, complete genome.
          Length = 367

 Score = 31.6 bits (70), Expect = 5.6
 Identities = 15/49 (30%), Positives = 30/49 (61%)
 Frame = -3

Query: 288 RL*IKILPSLTNNKKAFNPLAVLYEPDFFGIAAEALSAAHKAILSDNSM 142
           RL + ILP+L +   A+ PL+V+Y+ +   I  +  ++++  +L D+ M
Sbjct: 109 RLPVIILPTLASTCAAYTPLSVMYDEEGAMIRYDVFASSNALLLIDSEM 157



>gb:AY386371_2340967 Yaba monkey tumor virus, complete genome.
          Length = 657

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -1

Query: 344 PKINPGLTELNKEHHAHQIVSRSKYSLH*QTTRRPSIH*RYFMNPISLALLRKHC--LQH 171
           PKI   L EL+K      I S SKY +   TTR  SIH     + + LA   K C     
Sbjct: 182 PKIGEQLRELDK------IYSPSKYEMLLSTTRFQSIHFTDLSSSVDLAFHYKSCDSTYF 235

Query: 170 IRPYFLII 147
           I P F+ +
Sbjct: 236 IHPIFVAL 243



>gb:BA000028_694519 Oceanobacillus iheyensis HTE831 DNA, complete
           genome.
          Length = 61

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVIRKFKL--CRICFRELA 48



>gb:AE017333_448082 Bacillus licheniformis DSM 13, complete
           genome.>gb:CP000002_857889 Bacillus licheniformis ATCC
           14580, complete genome.
          Length = 61

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVIRKFKL--CRICFRELA 48



>gb:AE017333_446082 Bacillus licheniformis DSM 13, complete
           genome.>gb:CP000002_855904 Bacillus licheniformis ATCC
           14580, complete genome.
          Length = 61

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVIRKFKL--CRICFRELA 48



>pir|S05995|R3BS14 ribosomal protein S14 - Bacillus
           subtilis>gb:BACRPLP_746219 Bacillus subtilis ribosomal
           protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral
           membrane protein (secY) gene, adenylate kinase (adk)
           gene, methionine aminopeptidase (map) gene, inititation
           factor 1 (infA) gene, RNA polymerase alpha (rpoA)
           gene.>gb:BSSPC_751224 B.subtilis S10/spc operon rpmC,
           rpsQ, rplN, rplX, rplE, rpsN genes.>gb:BSUB0001_752094
           Bacillus subtilis complete genome (section 1 of 21):
           from 1 to 213080.
          Length = 61

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVIRKFKL--CRICFRELA 48



>sp|Q9ZAE6|RS14_THEMA 30S ribosomal protein S14.>pir|G72248|G72248
           ribosomal protein S14 - Thermotoga maritima (strain
           MSB8)>gb:AE001798_39382 Thermotoga maritima MSB8 section
           110 of 136 of the complete genome.>gb:TMRIBPRSA_197857
           Thermotoga maritima DNA for spc
           operon.>gb:AE000512_1113855 Thermotoga maritima MSB8,
           complete genome.
          Length = 61

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           C +CG    + R++GL  CR CFR  A E
Sbjct: 24  CHICGRPRAVYREFGL--CRICFRKLALE 50



>sp|Q927M0|R14A_LISMO 30S ribosomal protein S14-1.>pir|AC1402|AC1402
           ribosomal protein S14 [imported] - Listeria
           monocytogenes  (strain EGD-e)>pir|AB1778|AB1778
           ribosomal protein S14 [imported] - Listeria innocua
           (strain Clip11262)>gb:AE017331_445008 Listeria
           monocytogenes str. 4b F2365, section 10 of 10 of the
           complete genome.>gb:AL591983_537110 Listeria
           monocytogenes strain EGD, complete genome segment
           11/12.>gb:AL596173_540108 Listeria innocua Clip11262
           complete genome, segment 11/12.>gb:AE017262_1077364
           Listeria monocytogenes str. 4b F2365, complete genome.
          Length = 61

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 24  CERCGRPHSVIRKFKL--CRICFRELA 48



>sp|P12878|R14A_BACSU 30S ribosomal protein S14-1 (BS-A).
          Length = 60

 Score = 31.2 bits (69), Expect = 7.3
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           C  CG  H +IRK+ L  CR CFR  A
Sbjct: 23  CERCGRPHSVIRKFKL--CRICFRELA 47



>gb:AB112927_1200241 Drosophila melanogaster rph mRNA for rabphilin,
           partial cds.
          Length = 184

 Score = 30.8 bits (68), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 109 GSRACRVCGNSHGIIRKYGLMC--CRQ 183
           G   CR+CG++ GI+R   ++C  CRQ
Sbjct: 84  GPNCCRLCGDTFGILRPQRILCEDCRQ 110



>gb:AE014298_1125101 Drosophila melanogaster chromosome X, complete
           sequence.>gb:AE003451_1210283 Drosophila melanogaster
           chromosome X, section 35 of 74 of the complete sequence.
          Length = 638

 Score = 30.8 bits (68), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 109 GSRACRVCGNSHGIIRKYGLMC--CRQ 183
           G   CR+CG++ GI+R   ++C  CRQ
Sbjct: 84  GPNCCRLCGDTFGILRPQRILCEDCRQ 110



>gb:AE017283_431606 Propionibacterium acnes KPA171202, complete
           genome.
          Length = 61

 Score = 30.8 bits (68), Expect = 9.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNA 201
           C+ CG  H + RK+GL  CR C R  A
Sbjct: 24  CQRCGRPHSVYRKFGL--CRICLREMA 48



>sp|Q9PLY4|RS14_CAMJE 30S ribosomal protein S14.>pir|B81267|B81267
           30S ribosomal protein S14 Cj1694c [imported] -
           Campylobacter jejuni (strain NCTC
           11168)>gb:CJ11168X6_848050 Campylobacter jejuni subsp.
           jejuni NCTC 11168 complete genome; segment
           6/6.>gb:CP000025_879585 Campylobacter jejuni RM1221,
           complete genome.
          Length = 61

 Score = 30.8 bits (68), Expect = 9.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 121 CRVCGNSHGIIRKYGLMCCRQCFRSNAKE 207
           C++CG  H + R +G+  CR C R    E
Sbjct: 24  CQICGRPHSVYRDFGI--CRVCLRKMGNE 50


  Database: nr-aa:  Non-redundant protein sequence database Release
  05-06-11
    Posted date:  Jun 11, 2005 12:23 PM
  Number of letters in database: 581,917,975
  Number of sequences in database:  1,806,583
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,924,047
Number of Sequences: 1806583
Number of extensions: 8398714
Number of successful extensions: 19830
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 19605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19821
length of database: 581,917,975
effective HSP length: 114
effective length of database: 375,967,513
effective search space used: 16166603059
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)