BLAST results

[Archaea] [Bacteria] [Eukaryota] [Viruses] [Metazoa] [green plants] [higher plants] [Others]
BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig7278
         (592 letters)

Database: nr-aa:  Non-redundant protein sequence database Release
05-06-11 
           1,806,583 sequences; 581,917,975 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb:AP002854_1823164 Oryza sativa (japonica cultivar-group) genom...   106   3e-22   
sp|P49689|RS30_ARATH|RS30_ARATH 40S ribosomal protein S30.>pir|H85342|H8534...   103   3e-21   Arabidopsis thaliana [mouse-ear cress]
pir|F84580|F84580 40S ribosomal protein S30 [imported] - Arabido...   101   1e-20   Arabidopsis thaliana [mouse-ear cress]
gb:BC059522_2552499 Danio rerio Finkel-Biskis-Reilly murine sarc...    80   2e-14   
gb:AY357069_2529432 Hippocampus comes 40S ribosomal protein S30 ...    79   5e-14   
gb:BC077676_2560370 Xenopus tropicalis MGC89853 protein, mRNA (c...    78   9e-14   
gb:BC070571_2555551 Xenopus laevis hypothetical protein MGC80045...    78   9e-14   
gb:CGU41499_2111710 Cricetulus griseus arsenite-resistance prote...    78   9e-14   
gb:AB039084_2045152 Mus musculus fau gene, partial cds, strain:C...    78   9e-14   
gb:PSP320240_1702297 Polytomella sp. 'Pringsheim 198.80' mRNA fo...    78   9e-14   
gb:SSU72543_1445827 Sus scrofa ubiquitin-like/S30 ribosomal fusi...    78   9e-14   
gb:AF520959_1421984 Bos taurus ubiquitin-like/S30 ribosomal fusi...    78   9e-14   
gb:CR858470_1182643 Pongo pygmaeus mRNA; cDNA DKFZp468H2411 (fro...    78   9e-14   
pir|I48346|I48346 ribosomal protein fau - mouse>gb:AK002355_1151...    78   9e-14   Mus musculus [mouse]
pir|JC1278|JC1278 ubiquitin-like protein / ribosomal protein S30...    78   9e-14   Homo sapiens [man]
pir|A47416|A47416 ubiquitin-like protein / ribosomal protein S30...    78   9e-14   Rattus norvegicus [brown rat]
gb:AF402841_2492087 Ictalurus punctatus 40S ribosomal protein S3...    77   3e-13   
gb:AY071683_1295767 Drosophila melanogaster RH08962 full insert ...    76   4e-13   
gb:AY231796_1177089 Drosophila yakuba clone yak-em_CG15697 mRNA ...    76   4e-13   
gb:AE014297_1140538 Drosophila melanogaster chromosome 3R, compl...    76   4e-13   
gb:AB039086_2045154 Mus musculus fau gene, partial cds, strain:B...    76   5e-13   
sp|Q05472|RS30_HUMAN|RS30_HUMAN 40S ribosomal protein S30.>gb:RRFUSP_213814...    76   5e-13   Homo sapiens [man]
gb:OLA238274_2576780 Oryzias latipes mRNA for partial 40S riboso...    75   6e-13   
gb:AJ783767_1284158 Papilio dardanus mRNA for ubiquitin/ribosoma...    75   8e-13   
gb:AF400225_1268324 Spodoptera frugiperda ribosomal protein S30 ...    75   8e-13   
gb:AY829764_1180163 Lonomia obliqua hypothetical protein 17 mRNA...    75   8e-13   
gb:AF526215_1279312 Argopecten irradians isolate iolsaicl93ct114...    73   4e-12   
pir|T15642|T15642 hypothetical protein C26F1.4 - Caenorhabditis ...    73   4e-12   Caenorhabditis elegans [roundworm]
gb:AY769346_1350497 Bombyx mori ribosomal protein S30 (RpS30) mR...    72   7e-12   
sp|Q9W6Y0|RS30_ORYLA|RS30_ORYLA 40S ribosomal protein S30.                        70   2e-11   Oryzias latipes [Japanese rice fish]
gb:AY674244_1179842 Ixodes pacificus clone IP_7_60_92_99_CLU 40S...    70   3e-11   
gb:AE017341_1754621 Cryptococcus neoformans var. neoformans JEC2...    67   2e-10   
gb:AX885710_1481163 Sequence 1573 from Patent EP1033401.               64   1e-09   
gb:AC116984_1207379 Dictyostelium discoideum chromosome 2 map 25...    64   1e-09   
gb:CR380953_1651035 Candida glabrata strain CBS138 chromosome G ...    64   2e-09   
gb:CR382138_1671671 Debaryomyces hansenii chromosome F of strain...    64   2e-09   
gb:CNS07TIX_1648163 DNA centromeric region sequence from BAC DP1...    64   2e-09   
gb:AY850333_1180303 Magnaporthe grisea 40S ribosomal protein S30...    64   2e-09   
gb:AE016820_1750241 Ashbya gossypii (= Eremothecium gossypii) AT...    63   3e-09   
gb:CR382123_1655677 Kluyveromyces lactis strain NRRL Y-1140 chro...    63   3e-09   
sp|O42952|RS30_SCHPO|RS30_SCHPO 40S ribosomal protein S30.>pir|T39834|T3983...    62   5e-09   Schizosaccharomyces pombe
pir|S67074|S67074 ribosomal protein S30.e, cytosolic - yeast (Sa...    62   7e-09   Saccharomyces cerevisiae [brewer's yeast]
sp|Q12087|RS30_YEAST|RS30_YEAST 40S ribosomal protein S30.                        60   3e-08   Saccharomyces cerevisiae [brewer's yeast]
sp|O96269|RS30_PLAF7|RS30_PLAF7 40S ribosomal protein S30.>pir|A71604|A7160...    60   3e-08   Plasmodium falciparum
gb:BX538352_1359017 Cryptosporidium parvum chromosome 6, complet...    59   8e-08   
gb:CR548612_1375380 Paramecium tetraurelia macronuclear largest ...    58   1e-07   
gb:CR382132_1665556 Yarrowia lipolytica chromosome F of strain C...    57   3e-07   
gb:AY246705_1177553 Equus caballus ubiquitin-like/S30 ribosomal ...    48   1e-04   
gb:BT011203_1640953 Arabidopsis thaliana At4g29390 gene, complet...    45   7e-04   
gb:AX969508_1484817 Sequence 311 from Patent EP1104808.                40   0.004   
gb:AX972941_1488250 Sequence 3744 from Patent EP1104808.               40   0.022   
gb:HSRNASEB4_2020091 H.sapiens seb4B mRNA.                             35   0.69    
pir|S38383|S38383 SEB4B protein - human (fragment)                     35   1.2     Homo sapiens [man]


>gb:AP002854_1823164 Oryza sativa (japonica cultivar-group) genomic
           DNA, chromosome 6, BAC
           clone:OSJNBa0014B15.>gb:AP004240_1839138 Oryza sativa
           (japonica cultivar-group) genomic DNA, chromosome 2, BAC
           clone:OJ1548_F12.>gb:AP005056_1847391 Oryza sativa
           (japonica cultivar-group) genomic DNA, chromosome 2, PAC
           clone:P0689B12.
          Length = 62

 Score =  106 bits (264), Expect = 3e-22
 Identities = 52/62 (83%), Positives = 52/62 (83%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           MGKVHGSLARAGKVRGQTP          PRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
Sbjct: 1   MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 60

Query: 268 EK 273
           EK
Sbjct: 61  EK 62



>sp|P49689|RS30_ARATH 40S ribosomal protein S30.>pir|H85342|H85342
           RIBOSOMAL PROTEIN S30 homolog [imported] - Arabidopsis
           thaliana>gb:AB013392_1512104 Arabidopsis thaliana
           genomic DNA, chromosome 5, P1
           clone:MIK19.>gb:AC005169_1532272 Arabidopsis thaliana
           chromosome 2 clone F6F22 map mi148, complete
           sequence.>gb:ATCHRIV70_1546860 Arabidopsis thaliana DNA
           chromosome 4, contig fragment No.
           70.>gb:AY052341_1562713 Arabidopsis thaliana
           At2g19750/F6F22.22 mRNA, complete
           cds.>gb:AY061910_1564929 Arabidopsis thaliana
           At2g19750/F6F22.22 mRNA, complete
           cds.>gb:AY088766_1573779 Arabidopsis thaliana clone 9466
           mRNA, complete sequence.>gb:AY128361_1580660 Arabidopsis
           thaliana 40S ribosomal protein S30-like protein
           (At5g56670) mRNA, complete cds.>gb:BT006503_1639390
           Arabidopsis thaliana At5g56670 gene, complete cds.
          Length = 62

 Score =  103 bits (256), Expect = 3e-21
 Identities = 50/62 (80%), Positives = 52/62 (83%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           MGKVHGSLARAGKVRGQTP          PRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS
Sbjct: 1   MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60

Query: 268 EK 273
           EK
Sbjct: 61  EK 62



>pir|F84580|F84580 40S ribosomal protein S30 [imported] -
           Arabidopsis thaliana
          Length = 68

 Score =  101 bits (251), Expect = 1e-20
 Identities = 49/61 (80%), Positives = 51/61 (83%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE 270
           GKVHGSLARAGKVRGQTP          PRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Sbjct: 8   GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSSE 67

Query: 271 K 273
           K
Sbjct: 68  K 68



>gb:BC059522_2552499 Danio rerio Finkel-Biskis-Reilly murine sarcoma
           virus (FBR-MuSV) ubiquitously expressed (fox derived);
           ribosomal protein S30, mRNA (cDNA clone MGC:73171
           IMAGE:4200685), complete cds.
          Length = 133

 Score = 80.1 bits (196), Expect = 2e-14
 Identities = 41/70 (58%), Positives = 47/70 (67%)
 Frame = +1

Query: 58  CTLRRSQKPNMGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVG 237
           CTL  S +   GKVHGSLARAGKVRGQTP            GRA +R+QYNRRFV  V  
Sbjct: 63  CTLEVSGRLLGGKVHGSLARAGKVRGQTPKVDKQEKKKKKTGRAKRRIQYNRRFVNVVPT 122

Query: 238 FGKKRGPNSS 267
           FGKK+GPN++
Sbjct: 123 FGKKKGPNAN 132



>gb:AY357069_2529432 Hippocampus comes 40S ribosomal protein S30
           mRNA, complete cds.
          Length = 133

 Score = 79.0 bits (193), Expect = 5e-14
 Identities = 40/70 (57%), Positives = 47/70 (67%)
 Frame = +1

Query: 58  CTLRRSQKPNMGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVG 237
           CTL  + +   GKVHGSLARAGKVRGQTP            GRA +R+QYNRRFV  V  
Sbjct: 63  CTLEVAGRLLGGKVHGSLARAGKVRGQTPKVDKQEKKKKKTGRAKRRIQYNRRFVNVVPT 122

Query: 238 FGKKRGPNSS 267
           FGKK+GPN++
Sbjct: 123 FGKKKGPNAN 132



>gb:BC077676_2560370 Xenopus tropicalis MGC89853 protein, mRNA (cDNA
           clone MGC:89853 IMAGE:7028958), complete cds.
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>gb:BC070571_2555551 Xenopus laevis hypothetical protein MGC80045,
           mRNA (cDNA clone MGC:80045 IMAGE:4032724), complete cds.
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>gb:CGU41499_2111710 Cricetulus griseus arsenite-resistance protein
           (asr1) mRNA, complete cds.
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>gb:AB039084_2045152 Mus musculus fau gene, partial cds,
           strain:C57BL/10SnJ.>gb:AB039085_2045153 Mus musculus fau
           gene, partial cds, strain:BFM/2Msf.>gb:AB039087_2045155
           Mus musculus fau gene, partial cds,
           strain:CAST/Ei.>gb:AB039088_2045156 Mus musculus fau
           gene, partial cds, strain:MSM/Msf.>gb:AB039089_2045157
           Mus musculus fau gene, partial cds,
           strain:pgn2.>gb:AB039090_2045158 Mus musculus fau gene,
           partial cds, strain:SWN/Msf.>gb:AB039091_2045159 Mus
           musculus fau gene, partial cds,
           strain:HMI/Msf.>gb:AB039092_2045160 Mus musculus fau
           gene, partial cds, strain:NJL/Msf.>gb:AB039093_2045161
           Mus spicilegus fau gene, partial cds, strain:ZBN.
          Length = 137

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 78  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 136



>gb:PSP320240_1702297 Polytomella sp. 'Pringsheim 198.80' mRNA for
           40S ribosomal protein S30 (rs30 gene).
          Length = 61

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 39/60 (65%), Positives = 43/60 (71%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           MGKVHGSLARAGKVRGQTP          P GRA KR++Y RRFV  V G GKK+GPNS+
Sbjct: 1   MGKVHGSLARAGKVRGQTPKVAKQEKKKRPVGRALKRVKYIRRFVNVVSGIGKKKGPNSN 60



>gb:SSU72543_1445827 Sus scrofa ubiquitin-like/S30 ribosomal fusion
           protein (fau) mRNA, complete cds.
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>gb:AF520959_1421984 Bos taurus ubiquitin-like/S30 ribosomal fusion
           protein mRNA, complete cds.
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>gb:CR858470_1182643 Pongo pygmaeus mRNA; cDNA DKFZp468H2411 (from
           clone DKFZp468H2411).
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>pir|I48346|I48346 ribosomal protein fau - mouse>gb:AK002355_1151142
           Mus musculus adult male kidney cDNA, RIKEN full-length
           enriched library, clone:0610008O06
           product:Finkel-Biskis-Reilly murine sarcoma virus
           (FBR-MuSV) ubiquitously expressed (fox derived), full
           insert sequence.>gb:AK008466_1154596 Mus musculus adult
           male small intestine cDNA, RIKEN full-length enriched
           library, clone:2010206P06 product:Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           (fox derived), full insert sequence.>gb:AF147745_2056637
           Mus musculus monoclonal non-specific suppressor factor
           beta mRNA, complete cds.>gb:BC058691_2103420 Mus
           musculus Finkel-Biskis-Reilly murine sarcoma virus
           (FBR-MuSV) ubiquitously expressed (fox derived), mRNA
           (cDNA clone MGC:63322 IMAGE:6814998), complete
           cds.>gb:BC062873_2105031 Mus musculus
           Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV)
           ubiquitously expressed (fox derived), mRNA (cDNA clone
           MGC:86051 IMAGE:5683472), complete
           cds.>gb:BC081463_2107937 Mus musculus
           Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV)
           ubiquitously expressed (fox derived), mRNA (cDNA clone
           MGC:102152 IMAGE:6408436), complete
           cds.>gb:MMFAU_2114900 M.musculus fau
           mRNA.>gb:MUSFAUA_2125819 Mus musculus Fau gene, complete
           cds.>gb:MUSMNSFB_2129204 Mus musculus MNSF-beta mRNA for
           monoclonal nonspecific suppressor factor beta, complete
           cds.
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>pir|JC1278|JC1278 ubiquitin-like protein / ribosomal protein S30,
           cytosolic - human>gb:AK026639_1910670 Homo sapiens cDNA:
           FLJ22986 fis, clone KAT11742.>gb:AY398663_1949795 Homo
           sapiens Finkel-Biskis-Reilly murine sarcoma virus
           (FBR-MuSV) ubiquitously expressed (fox derived);
           ribosomal protein S30 (FAU) gene, complete
           cds.>gb:BC033877_1981120 Homo sapiens
           Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV)
           ubiquitously expressed (fox derived); ribosomal protein
           S30, mRNA (cDNA clone MGC:45978 IMAGE:5758816), complete
           cds.>gb:CR541974_1994201 Homo sapiens full open reading
           frame cDNA clone RZPDo834G1234D for gene FAU,
           Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV)
           ubiquitously expressed (fox derived); ribosomal protein
           S30; complete cds, incl. stopcodon.>gb:HSFAU_2013168
           H.sapiens fau mRNA.>gb:HSFAU1_2013169 H.sapiens fau 1
           gene.
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>pir|A47416|A47416 ubiquitin-like protein / ribosomal protein S30,
           cytosolic [validated] - rat>gb:RRFUSP_2138141 Rattus
           rattus mRNA for hybrid protein (ubiquitin-like
           protein/rps30).
          Length = 133

 Score = 78.2 bits (191), Expect = 9e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 132



>gb:AF402841_2492087 Ictalurus punctatus 40S ribosomal protein S30
           mRNA, complete cds.
          Length = 133

 Score = 76.6 bits (187), Expect = 3e-13
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = +1

Query: 58  CTLRRSQKPNMGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVG 237
           CTL    +   GKVHGSLARAGKVRGQTP            GRA  R+QYNRRFV  V  
Sbjct: 63  CTLEVVGRLLGGKVHGSLARAGKVRGQTPKVDKQEKKKKKTGRAKARIQYNRRFVNVVPT 122

Query: 238 FGKKRGPNSS 267
           FGKK+GPN++
Sbjct: 123 FGKKKGPNAN 132



>gb:AY071683_1295767 Drosophila melanogaster RH08962 full insert
           cDNA.
          Length = 147

 Score = 76.3 bits (186), Expect = 4e-13
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKV+GQTP            GRA +R+QYNRRFV  V GFG++RGPN++
Sbjct: 87  GKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRGPNAN 145



>gb:AY231796_1177089 Drosophila yakuba clone yak-em_CG15697 mRNA
           sequence.>gb:AY232248_1177541 Drosophila yakuba clone
           yak-ad_CG15697 mRNA sequence.
          Length = 132

 Score = 76.3 bits (186), Expect = 4e-13
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKV+GQTP            GRA +R+QYNRRFV  V GFG++RGPN++
Sbjct: 72  GKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRGPNAN 130



>gb:AE014297_1140538 Drosophila melanogaster chromosome 3R, complete
           sequence.>gb:AE014297_1140539 Drosophila melanogaster
           chromosome 3R, complete sequence.>gb:AE003732_1222531
           Drosophila melanogaster chromosome 3R, section 70 of 118
           of the complete sequence.>gb:AE003732_1222532 Drosophila
           melanogaster chromosome 3R, section 70 of 118 of the
           complete sequence.
          Length = 132

 Score = 76.3 bits (186), Expect = 4e-13
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKV+GQTP            GRA +R+QYNRRFV  V GFG++RGPN++
Sbjct: 72  GKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRGPNAN 130



>gb:AB039086_2045154 Mus musculus fau gene, partial cds,
           strain:BLG2/Msf.
          Length = 137

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 37/58 (63%), Positives = 41/58 (70%)
 Frame = +1

Query: 94  KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           KVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 79  KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 136



>sp|Q05472|RS30_HUMAN 40S ribosomal protein S30.>gb:RRFUSP_2138143
           Rattus rattus mRNA for hybrid protein (ubiquitin-like
           protein/rps30).
          Length = 59

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 37/58 (63%), Positives = 41/58 (70%)
 Frame = +1

Query: 94  KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           KVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V  FGKK+GPN++
Sbjct: 1   KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNAN 58



>gb:OLA238274_2576780 Oryzias latipes mRNA for partial 40S ribosomal
           protein S30.
          Length = 76

 Score = 75.5 bits (184), Expect = 6e-13
 Identities = 39/70 (55%), Positives = 46/70 (65%)
 Frame = +1

Query: 58  CTLRRSQKPNMGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVG 237
           CTL  + +   GKVHGSLARAGKVRGQTP            GRA +R+QYNRRFV  V  
Sbjct: 6   CTLEVAGRLLGGKVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPT 65

Query: 238 FGKKRGPNSS 267
           FGKK+G N++
Sbjct: 66  FGKKKGANAN 75



>gb:AJ783767_1284158 Papilio dardanus mRNA for ubiquitin/ribosomal
           protein S30e fusion protein (fub/rpS30e gene).
          Length = 130

 Score = 75.1 bits (183), Expect = 8e-13
 Identities = 36/59 (61%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKV+GQTP            GRA +R+QYNRRFV  V  FG++RGPNS+
Sbjct: 71  GKVHGSLARAGKVKGQTPKVEKQQKKKKKTGRAKRRIQYNRRFVNVVQTFGRRRGPNSN 129



>gb:AF400225_1268324 Spodoptera frugiperda ribosomal protein S30
           mRNA, complete cds.
          Length = 131

 Score = 75.1 bits (183), Expect = 8e-13
 Identities = 36/59 (61%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKV+GQTP            GRA +R+QYNRRFV  V  FG++RGPNS+
Sbjct: 72  GKVHGSLARAGKVKGQTPKVEKQQKKKKKTGRAKRRIQYNRRFVNVVQTFGRRRGPNSN 130



>gb:AY829764_1180163 Lonomia obliqua hypothetical protein 17 mRNA,
           complete cds.
          Length = 130

 Score = 75.1 bits (183), Expect = 8e-13
 Identities = 36/59 (61%), Positives = 42/59 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKV+GQTP            GRA +R+QYNRRFV  V  FG++RGPNS+
Sbjct: 71  GKVHGSLARAGKVKGQTPKVEKQQKKKKKTGRAKRRIQYNRRFVNVVQTFGRRRGPNSN 129



>gb:AF526215_1279312 Argopecten irradians isolate
           iolsaicl93ct114cn122 ribosomal protein S30 mRNA,
           complete cds.
          Length = 131

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 34/59 (57%), Positives = 41/59 (69%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKV+GQTP            GRA +RMQYNRRF   V  FG+++GPN++
Sbjct: 72  GKVHGSLARAGKVKGQTPKVEKQEKKKAKTGRAKRRMQYNRRFGVTVATFGRRKGPNAN 130



>pir|T15642|T15642 hypothetical protein C26F1.4 - Caenorhabditis
           elegans>gb:U53148_1404834 Caenorhabditis elegans cosmid
           C26F1, complete sequence.
          Length = 130

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 36/59 (61%), Positives = 40/59 (67%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHGSLARAGKVR QTP           RGRA +R+QY RR+V    G GKKRGPNS+
Sbjct: 71  GKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYVNVASGPGKKRGPNSN 129



>gb:AY769346_1350497 Bombyx mori ribosomal protein S30 (RpS30) mRNA,
           complete cds.
          Length = 130

 Score = 72.0 bits (175), Expect = 7e-12
 Identities = 35/59 (59%), Positives = 40/59 (67%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           GKVHG LARAGKV+GQTP            GRA +R+QYNRRFV  V  FG+ RGPNS+
Sbjct: 71  GKVHGYLARAGKVKGQTPKVEKQQKKKKKTGRAKRRIQYNRRFVNVVQTFGRSRGPNSN 129



>sp|Q9W6Y0|RS30_ORYLA 40S ribosomal protein S30.
          Length = 59

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 35/58 (60%), Positives = 40/58 (68%)
 Frame = +1

Query: 94  KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           KVHGSLARAGKVRGQTP            GRA +R+QYNRRFV  V  FGKK+G N++
Sbjct: 1   KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANAN 58



>gb:AY674244_1179842 Ixodes pacificus clone IP_7_60_92_99_CLU 40S
           ribosomal protein S30 mRNA, complete cds.
          Length = 133

 Score = 70.1 bits (170), Expect = 3e-11
 Identities = 35/60 (58%), Positives = 43/60 (71%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE 270
           GKVHGSLARAGKV+GQTP            GRA +R+QYNRRFV AV  F ++RGPN+++
Sbjct: 73  GKVHGSLARAGKVKGQTPKVDEQEKKKKT-GRAKRRIQYNRRFVNAVATFDRRRGPNTNQ 131



>gb:AE017341_1754621 Cryptococcus neoformans var. neoformans JEC21
           chromosome 1, complete sequence.
          Length = 66

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 34/58 (58%), Positives = 37/58 (63%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPN 261
           MGKVHGSLARAGKV+ QTP          P+GRA KR+QY RRFV   V  G KR  N
Sbjct: 1   MGKVHGSLARAGKVKSQTPKVEPQEKKKVPKGRAQKRLQYTRRFVNVTVAPGGKRRMN 58



>gb:AX885710_1481163 Sequence 1573 from Patent EP1033401.
          Length = 130

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 32/54 (59%), Positives = 35/54 (64%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR 252
           GKVHGSLARAGKVRGQTP            GRA +RMQYNRRFV  V    ++R
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAXRRMQYNRRFVNVVPPLARRR 127



>gb:AC116984_1207379 Dictyostelium discoideum chromosome 2 map
           2567470-3108875 strain AX4, complete sequence.
          Length = 66

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 34/59 (57%), Positives = 37/59 (62%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNS 264
           MGKVHG L RAGKVR  TP            GRA KRM +NRR V AV GFGKK+G N+
Sbjct: 1   MGKVHGGLNRAGKVRNATPKKDKEEKRKPKVGRAKKRMIFNRRNVAAVAGFGKKKGYNT 59



>gb:CR380953_1651035 Candida glabrata strain CBS138 chromosome G
           complete sequence.
          Length = 63

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR---GP 258
           M KVHGSLARAGKV+ QTP          P+GRA+KR+ Y RRFV   +  GK+R   GP
Sbjct: 1   MAKVHGSLARAGKVKSQTPKVEKSEKPKKPKGRAYKRLLYTRRFVNVTLTNGKRRMNPGP 60

Query: 259 NS 264
           +S
Sbjct: 61  SS 62



>gb:CR382138_1671671 Debaryomyces hansenii chromosome F of strain
           CBS767 of Debaryomyces hansenii.
          Length = 63

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR 252
           MGKVHGSLARAGKV+ QTP          P+GRA+KR+ Y RRFV   +  GK++
Sbjct: 1   MGKVHGSLARAGKVKSQTPKVDAQEKPKKPKGRAYKRLLYTRRFVNVTLTNGKRK 55



>gb:CNS07TIX_1648163 DNA centromeric region sequence from BAC
           DP15B03, DP38F06 of chromosome 5 of Podospora anserina.
          Length = 57

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 32/55 (58%), Positives = 35/55 (63%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR 252
           MGKVHGSLARAGKV+ QTP          P+GRAHKR  Y RRFV   +  G KR
Sbjct: 1   MGKVHGSLARAGKVKSQTPKVEKQEKAKTPKGRAHKREIYTRRFVNITLTPGGKR 55



>gb:AY850333_1180303 Magnaporthe grisea 40S ribosomal protein
           S30-like protein mRNA, complete cds.
          Length = 63

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 33/58 (56%), Positives = 36/58 (62%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPN 261
           MGK HGSLARAGKV+ QTP          P+GRAHKR QY RRFV   +  G KR  N
Sbjct: 1   MGKQHGSLARAGKVKSQTPKVEPQEKPKRPKGRAHKREQYVRRFVNVTLAPGGKRKMN 58



>gb:AE016820_1750241 Ashbya gossypii (= Eremothecium gossypii) ATCC
           10895 chromosome VII, complete sequence.
          Length = 63

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR 252
           MGKVHGSLARAGKV+ QTP          P+GRA+KR+ Y RRFV   +  GK++
Sbjct: 1   MGKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYTRRFVNVTLTNGKRK 55



>gb:CR382123_1655677 Kluyveromyces lactis strain NRRL Y-1140
           chromosome C of strain NRRL Y-1140 of Kluyveromyces
           lactis.
          Length = 63

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR 252
           MGKVHGSLARAGKV+ QTP          P+GRA+KR+ Y RRFV   +  GK++
Sbjct: 1   MGKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYTRRFVNVTLTNGKRK 55



>sp|O42952|RS30_SCHPO 40S ribosomal protein S30.>pir|T39834|T39834
           ribosomal protein s30 - fission yeast
           (Schizosaccharomyces pombe)>gb:SPAC19B12_1716902 S.pombe
           chromosome I cosmid c19B12.>gb:SPAJ2731_1718557
           Schizosaccharomyces pombe mRNA for ribosomal protein
           S30.>gb:SPBC19G7_1719442 S.pombe chromosome II cosmid
           c19G7.
          Length = 61

 Score = 62.4 bits (150), Expect = 5e-09
 Identities = 33/60 (55%), Positives = 37/60 (61%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 267
           MGKVHGSLARAGKV+ QTP          P+GRA+KR+ Y RRFV      G KR  N S
Sbjct: 1   MGKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNVTNMVGGKRRMNPS 60



>pir|S67074|S67074 ribosomal protein S30.e, cytosolic - yeast
           (Saccharomyces cerevisiae)>gb:SCU48699_1710437
           Saccharomyces cerevisiae ribosomal protein S30 homolog
           (RPS30A) mRNA, complete cds.>gb:SCU48700_1710438
           Saccharomyces cerevisiae ribosomal protein S30 homolog
           (RPS30) gene, complete cds.>gb:SCU83406_1710584
           Saccharomyces cerevisiae ribosomal protein S30 homolog
           (RPS30B) mRNA, complete cds.>gb:SCU83407_1710585
           Saccharomyces cerevisiae ribosomal protein S30 homolog
           (RPS30B) gene, complete cds.>gb:SCYOR182C_1714415
           S.cerevisiae chromosome XV reading frame ORF
           YOR182c.>gb:YSCL8003_1729446 Saccharomyces cerevisiae
           chromosome XII cosmid 8003.
          Length = 63

 Score = 62.0 bits (149), Expect = 7e-09
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR 252
           M KVHGSLARAGKV+ QTP          P+GRA+KR+ Y RRFV   +  GK+R
Sbjct: 1   MAKVHGSLARAGKVKSQTPKVEKTEKPKKPKGRAYKRLLYTRRFVNVTLVNGKRR 55



>sp|Q12087|RS30_YEAST 40S ribosomal protein S30.
          Length = 62

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 29/53 (54%), Positives = 35/53 (66%)
 Frame = +1

Query: 94  KVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR 252
           KVHGSLARAGKV+ QTP          P+GRA+KR+ Y RRFV   +  GK+R
Sbjct: 2   KVHGSLARAGKVKSQTPKVEKTEKPKKPKGRAYKRLLYTRRFVNVTLVNGKRR 54



>sp|O96269|RS30_PLAF7 40S ribosomal protein S30.>pir|A71604|A71604
           ribosomal protein S30 PFB0885w - malaria parasite
           (Plasmodium falciparum)>gb:AE001362_939416 Plasmodium
           falciparum 3D7 chromosome 2 complete
           sequence.>gb:AE001422_1208727 Plasmodium falciparum 3D7
           chromosome 2 section 59 of 73 of the complete sequence.
          Length = 58

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 33/59 (55%), Positives = 36/59 (61%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNS 264
           MGKVHGSLARAGKV+ QTP            GRA KR  YNRRF       G+K+GPNS
Sbjct: 1   MGKVHGSLARAGKVKNQTPKVPKLDKKKRLTGRAKKRQLYNRRFSD---NGGRKKGPNS 56



>gb:BX538352_1359017 Cryptosporidium parvum chromosome 6, complete
           sequence; segment 3/4.
          Length = 58

 Score = 58.5 bits (140), Expect = 8e-08
 Identities = 32/59 (54%), Positives = 35/59 (59%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKRGPNS 264
           M K HGSLARAGKV+ QTP            GRA KR QYNRRFV+ V G  +K  P S
Sbjct: 1   MAKAHGSLARAGKVKNQTPRVEKQEKKKALTGRAKKRQQYNRRFVSVVAG-RRKCNPQS 58



>gb:CR548612_1375380 Paramecium tetraurelia macronuclear largest
           chromosome, complete sequence.
          Length = 90

 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTP-XXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFG---KKRG 255
           MGK+HG+LA+AGKVR QTP           P+GRA+KR+ +NRRF +A    G   K++G
Sbjct: 1   MGKLHGTLAKAGKVRKQTPKIEKQVRRHKIPKGRAYKRICFNRRFGSAAASTGPQQKRKG 60

Query: 256 PN 261
           PN
Sbjct: 61  PN 62



>gb:CR382132_1665556 Yarrowia lipolytica chromosome F of strain
           CLIB99 of Yarrowia lipolytica.
          Length = 61

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = +1

Query: 88  MGKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQYNRRFVTAVVGFGKKR 252
           MGK HGS+ARAGKV+ QTP          P GRA KR+ Y RRF+   +  GK++
Sbjct: 1   MGKQHGSIARAGKVKSQTPKVEKQEKPKAPVGRAKKRLLYTRRFINVTLVNGKRK 55



>gb:AY246705_1177553 Equus caballus ubiquitin-like/S30 ribosomal
           fusion protein mRNA, partial cds.
          Length = 111

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 24/38 (63%), Positives = 25/38 (65%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTPXXXXXXXXXXPRGRAHKRMQ 204
           GKVHGSLARAGKVRGQTP            GRA +RMQ
Sbjct: 74  GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQ 111



>gb:BT011203_1640953 Arabidopsis thaliana At4g29390 gene, complete
           cds.>gb:BT012137_1641344 Arabidopsis thaliana At4g29390
           mRNA, complete cds.
          Length = 78

 Score = 45.4 bits (106), Expect = 7e-04
 Identities = 27/60 (45%), Positives = 33/60 (55%)
 Frame = -2

Query: 267 R*VWSSLLSEANNGSDEAAVVLHPXXXXXXXXXXXXXXXXXXXLTSHLTGTSQRSMNLTH 88
           R V SSLL+++NNG  E A+VL P                   LTSHLTGTSQ ++ LTH
Sbjct: 12  RRVGSSLLAKSNNGGYETAIVLQPFVSTATWLLLLILLCHFRCLTSHLTGTSQGTVYLTH 71



>gb:AX969508_1484817 Sequence 311 from Patent EP1104808.
          Length = 78

 Score = 40.4 bits (93), Expect(2) = 0.004
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTP 144
           GKVHGSLARAGKVRGQTP
Sbjct: 25  GKVHGSLARAGKVRGQTP 42



 Score = 21.9 bits (45), Expect(2) = 0.004
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +3

Query: 165 EEEAPRPRSQADAVQPPL--RHCRCWLRK 245
           EEE  R    ADAV P L  R    W R+
Sbjct: 50  EEEEDRSGXXADAVXPALCQRCAHLWQRR 78



>gb:AX972941_1488250 Sequence 3744 from Patent EP1104808.
          Length = 74

 Score = 40.4 bits (93), Expect = 0.022
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 91  GKVHGSLARAGKVRGQTP 144
           GKVHGSLARAGKVRGQTP
Sbjct: 4   GKVHGSLARAGKVRGQTP 21



>gb:HSRNASEB4_2020091 H.sapiens seb4B mRNA.
          Length = 230

 Score = 35.4 bits (80), Expect = 0.69
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +1

Query: 193 KRMQYNRRFVTAVVGFGKKRG 255
           +RMQYNRRFV  V  FGKK+G
Sbjct: 1   RRMQYNRRFVNVVPTFGKKKG 21



>pir|S38383|S38383 SEB4B protein - human (fragment)
          Length = 229

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +1

Query: 196 RMQYNRRFVTAVVGFGKKRG 255
           RMQYNRRFV  V  FGKK+G
Sbjct: 1   RMQYNRRFVNVVPTFGKKKG 20


  Database: nr-aa:  Non-redundant protein sequence database Release
  05-06-11
    Posted date:  Jun 11, 2005 12:23 PM
  Number of letters in database: 581,917,975
  Number of sequences in database:  1,806,583
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,548,884
Number of Sequences: 1806583
Number of extensions: 9133619
Number of successful extensions: 21653
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 21306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21650
length of database: 581,917,975
effective HSP length: 118
effective length of database: 368,741,181
effective search space used: 28761812118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)