BLAST results

[Archaea] [Bacteria] [Eukaryota] [Viruses] [Metazoa] [green plants] [higher plants] [Others]
Query= JMFN039H10

Length=633
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ref|XP_009761420.1|  PREDICTED: serine/arginine-rich splicing fac...  54.3    1e-05   Nicotiana sylvestris
ref|XP_006353985.1|  PREDICTED: serine/arginine-rich splicing fac...  53.5    2e-05   Solanum tuberosum [potatoes]
ref|XP_010320168.1|  PREDICTED: serine/arginine-rich splicing fac...  53.5    2e-05   Solanum lycopersicum
ref|NP_001274830.1|  serine/arginine-rich splicing factor 2-like      53.5    2e-05   Solanum tuberosum [potatoes]
ref|XP_004237903.1|  PREDICTED: serine/arginine-rich splicing fac...  53.5    3e-05   Solanum lycopersicum
ref|XP_009606955.1|  PREDICTED: serine/arginine-rich splicing fac...  50.8    2e-04   Nicotiana tomentosiformis
ref|XP_009606953.1|  PREDICTED: serine/arginine-rich splicing fac...  50.1    4e-04   Nicotiana tomentosiformis
gb|KDO42433.1|  hypothetical protein CISIN_1g024258mg                 49.7    5e-04   Citrus sinensis [apfelsine]



>ref|XP_009761420.1| PREDICTED: serine/arginine-rich splicing factor SC35-like [Nicotiana 
sylvestris]
Length=254

 Score = 54.3 bits (129),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 0/38 (0%)
 Frame = +1

Query  367  GSPDGRNDKVRSPTPRSLSPRGRGAESRSPSPRSDADE  480
             SPDGRN K RSPTP+S+SPRGR A SRSP PRSDAD+
Sbjct  217  ASPDGRNRKERSPTPKSVSPRGRRAVSRSPLPRSDADD  254



>ref|XP_006353985.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 
X2 [Solanum tuberosum]
Length=257

 Score = 53.5 bits (127),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 0/38 (0%)
 Frame = +1

Query  367  GSPDGRNDKVRSPTPRSLSPRGRGAESRSPSPRSDADE  480
             SPDGRN K RSPTP+S+SPRGR A SRSP PRSDAD+
Sbjct  220  ASPDGRNHKDRSPTPKSISPRGRRAGSRSPLPRSDADD  257



>ref|XP_010320168.1| PREDICTED: serine/arginine-rich splicing factor SC35-like isoform 
X2 [Solanum lycopersicum]
Length=257

 Score = 53.5 bits (127),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 0/38 (0%)
 Frame = +1

Query  367  GSPDGRNDKVRSPTPRSLSPRGRGAESRSPSPRSDADE  480
             SPDGRN K RSPTP+S+SPRGR A SRSP PRSDAD+
Sbjct  220  ASPDGRNHKDRSPTPKSISPRGRRAGSRSPLPRSDADD  257



>ref|NP_001274830.1| serine/arginine-rich splicing factor 2-like [Solanum tuberosum]
 gb|ABB29919.1| unknown [Solanum tuberosum]
Length=258

 Score = 53.5 bits (127),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 0/38 (0%)
 Frame = +1

Query  367  GSPDGRNDKVRSPTPRSLSPRGRGAESRSPSPRSDADE  480
             SPDGRN K RSPTP+S+SPRGR A SRSP PRSDAD+
Sbjct  221  ASPDGRNHKDRSPTPKSISPRGRRAGSRSPLPRSDADD  258



>ref|XP_004237903.1| PREDICTED: serine/arginine-rich splicing factor SC35-like isoform 
X1 [Solanum lycopersicum]
Length=258

 Score = 53.5 bits (127),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 32/38 (84%), Gaps = 0/38 (0%)
 Frame = +1

Query  367  GSPDGRNDKVRSPTPRSLSPRGRGAESRSPSPRSDADE  480
             SPDGRN K RSPTP+S+SPRGR A SRSP PRSDAD+
Sbjct  221  ASPDGRNHKDRSPTPKSISPRGRRAGSRSPLPRSDADD  258



>ref|XP_009606955.1| PREDICTED: serine/arginine-rich splicing factor SC35-like [Nicotiana 
tomentosiformis]
Length=256

 Score = 50.8 bits (120),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 28/38 (74%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
 Frame = +1

Query  367  GSPDGRNDKVRSPTPRSLSPRGRGAESRSPSPRSDADE  480
             SPDGRN K RSPTP+S+SPRGR A SRSP P SDAD+
Sbjct  219  ASPDGRNRKERSPTPKSVSPRGRRAGSRSPLPCSDADD  256



>ref|XP_009606953.1| PREDICTED: serine/arginine-rich splicing factor SC35-like [Nicotiana 
tomentosiformis]
Length=254

 Score = 50.1 bits (118),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 30/38 (79%), Gaps = 0/38 (0%)
 Frame = +1

Query  367  GSPDGRNDKVRSPTPRSLSPRGRGAESRSPSPRSDADE  480
             SPDGRN K RSPTP+S+SPRGR   SRSP P SDAD+
Sbjct  217  ASPDGRNHKDRSPTPKSVSPRGRRGGSRSPLPHSDADD  254



>gb|KDO42433.1| hypothetical protein CISIN_1g024258mg [Citrus sinensis]
Length=270

 Score = 49.7 bits (117),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 62/142 (44%), Positives = 74/142 (52%), Gaps = 20/142 (14%)
 Frame = +2

Query  5    GQGATVLDQGiemiieieiieRGAGVEVGVDLSMIDTVAGIEIVIG-TEAAVEALITIKI  181
            GQG  VL +  EMI EIEIIE G  VE G+  ++ DTV GIEI +   EA V  LIT + 
Sbjct  115  GQGVAVLGEDTEMITEIEIIEGGVTVEAGIGTNVTDTVGGIEITVDEVEAEVPVLITPEA  174

Query  182  VVEVDMMMRGVAEVVPMEVPLLLGVAQVQRGVHLLAEPLNLGMVAQVQGGVHLLAEPLNL  361
            V E DMM+  +A V+                V  LA P  L  +A V  GV  LA  L L
Sbjct  175  VAEADMMI--IAGVL----------------VDRLAVPPQLS-IAPVPAGVFPLARILLL  215

Query  362  GMAVQMDAMTKYALQLQEVCHP  427
            G+ V MDA+    LQL EV  P
Sbjct  216  GVRVLMDAVVVSGLQLLEVLPP  237



Lambda      K        H        a         alpha
   0.318    0.134    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 920235338500