BLAST results

[Archaea] [Bacteria] [Eukaryota] [Viruses] [Metazoa] [green plants] [higher plants] [Others]
Query= JMFF001H05

Length=458
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ref|XP_006348235.1|  PREDICTED: probable E3 ubiquitin-protein lig...  63.5    9e-09   Solanum tuberosum [potatoes]
ref|XP_004244215.1|  PREDICTED: ultraviolet-B receptor UVR8           60.8    7e-08   Solanum lycopersicum
ref|XP_009804868.1|  PREDICTED: probable E3 ubiquitin-protein lig...  50.1    2e-04   Nicotiana sylvestris
ref|XP_011082653.1|  PREDICTED: ultraviolet-B receptor UVR8 isofo...  48.5    6e-04   Sesamum indicum [beniseed]
ref|XP_011082651.1|  PREDICTED: ultraviolet-B receptor UVR8 isofo...  48.5    6e-04   Sesamum indicum [beniseed]
ref|XP_011082652.1|  PREDICTED: ultraviolet-B receptor UVR8 isofo...  48.5    6e-04   Sesamum indicum [beniseed]



>ref|XP_006348235.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Solanum 
tuberosum]
Length=533

 Score = 63.5 bits (153),  Expect = 9e-09, Method: Composition-based stats.
 Identities = 32/72 (44%), Positives = 40/72 (56%), Gaps = 18/72 (25%)
 Frame = +2

Query  242  NFVKSDVFFINCLNCLRFRLKI**LsyfwdfffsfsxsgfYILXMKMGDKLRSASMDDLP  421
            NF+ SD+F I C++C  FR+K                        KMGD+LRS SM+DLP
Sbjct  24   NFLTSDIFLIKCVDCFHFRIK------------------DCFCEGKMGDRLRSTSMEDLP  65

Query  422  GHLVLEILTSGR  457
             HL+LEIL SGR
Sbjct  66   VHLILEILLSGR  77



>ref|XP_004244215.1| PREDICTED: ultraviolet-B receptor UVR8 [Solanum lycopersicum]
Length=537

 Score = 60.8 bits (146),  Expect = 7e-08, Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 38/72 (53%), Gaps = 18/72 (25%)
 Frame = +2

Query  242  NFVKSDVFFINCLNCLRFRLKI**LsyfwdfffsfsxsgfYILXMKMGDKLRSASMDDLP  421
            NF+ SD+F I C+NC  FR+K                        KMGD+LRS  M+DLP
Sbjct  24   NFLTSDIFLIKCVNCFHFRIK------------------DCFCEGKMGDRLRSTLMEDLP  65

Query  422  GHLVLEILTSGR  457
             HL+LEIL  GR
Sbjct  66   VHLILEILMCGR  77



>ref|XP_009804868.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 
X1 [Nicotiana sylvestris]
Length=481

 Score = 50.1 bits (118),  Expect = 2e-04, Method: Composition-based stats.
 Identities = 22/26 (85%), Positives = 25/26 (96%), Gaps = 0/26 (0%)
 Frame = +2

Query  380  MGDKLRSASMDDLPGHLVLEILTSGR  457
            MGD+LRSASM+DLP HL+LEILTSGR
Sbjct  1    MGDRLRSASMEDLPVHLILEILTSGR  26



>ref|XP_011082653.1| PREDICTED: ultraviolet-B receptor UVR8 isoform X3 [Sesamum indicum]
Length=488

 Score = 48.5 bits (114),  Expect = 6e-04, Method: Composition-based stats.
 Identities = 20/26 (77%), Positives = 25/26 (96%), Gaps = 0/26 (0%)
 Frame = +2

Query  380  MGDKLRSASMDDLPGHLVLEILTSGR  457
            MGD+L+S++MDDLP HL+LEILTSGR
Sbjct  1    MGDRLKSSTMDDLPLHLILEILTSGR  26



>ref|XP_011082651.1| PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Sesamum indicum]
Length=491

 Score = 48.5 bits (114),  Expect = 6e-04, Method: Composition-based stats.
 Identities = 20/26 (77%), Positives = 25/26 (96%), Gaps = 0/26 (0%)
 Frame = +2

Query  380  MGDKLRSASMDDLPGHLVLEILTSGR  457
            MGD+L+S++MDDLP HL+LEILTSGR
Sbjct  1    MGDRLKSSTMDDLPLHLILEILTSGR  26



>ref|XP_011082652.1| PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Sesamum indicum]
Length=490

 Score = 48.5 bits (114),  Expect = 6e-04, Method: Composition-based stats.
 Identities = 20/26 (77%), Positives = 25/26 (96%), Gaps = 0/26 (0%)
 Frame = +2

Query  380  MGDKLRSASMDDLPGHLVLEILTSGR  457
            MGD+L+S++MDDLP HL+LEILTSGR
Sbjct  1    MGDRLKSSTMDDLPLHLILEILTSGR  26



Lambda      K        H        a         alpha
   0.318    0.134    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 566299029105