BLAST results

[Archaea] [Bacteria] [Eukaryota] [Viruses] [Metazoa] [green plants] [higher plants] [Others]
Query= JMCP018B11 345 bp,:Filtered

Length=345
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

dbj|BAD07001.1|  hypothetical protein                                 45.1    3e-04   Ipomoea nil [qian niu]
ref|XP_008246411.1|  PREDICTED: histone H2A.1-like                    45.4    7e-04   Prunus mume [ume]



>dbj|BAD07001.1| hypothetical protein [Ipomoea nil]
Length=28

 Score = 45.1 bits (105),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 23/28 (82%), Gaps = 0/28 (0%)
 Frame = -1

Query  300  LKQVHFSFLILPNAAAITTYLTLHKHPY  217
            LK   F  LILPNAAAITTYLTLHKHPY
Sbjct  1    LKTSTFFILILPNAAAITTYLTLHKHPY  28



>ref|XP_008246411.1| PREDICTED: histone H2A.1-like [Prunus mume]
Length=148

 Score = 45.4 bits (106),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 27/37 (73%), Positives = 33/37 (89%), Gaps = 0/37 (0%)
 Frame = +3

Query  6    VTIAAGGVLPNINPVLLPkkaaaseekasqkTPKSPK  116
            VTIA+GGVLPNINPVLLPKK + +  +A++KTPKSPK
Sbjct  107  VTIASGGVLPNINPVLLPKKTSNASSEAAEKTPKSPK  143



Lambda      K        H        a         alpha
   0.318    0.134    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 554595229600