BLAST results

[Archaea] [Bacteria] [Eukaryota] [Viruses] [Metazoa] [green plants] [higher plants] [Others]
Query= Contig12890

Length=490
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ref|XP_006348235.1|  PREDICTED: probable E3 ubiquitin-protein lig...  68.2    3e-10   Solanum tuberosum [potatoes]
ref|XP_004244215.1|  PREDICTED: ultraviolet-B receptor UVR8           65.9    2e-09   Solanum lycopersicum
ref|XP_011082651.1|  PREDICTED: ultraviolet-B receptor UVR8 isofo...  52.0    6e-05   Sesamum indicum [beniseed]
ref|XP_011082652.1|  PREDICTED: ultraviolet-B receptor UVR8 isofo...  51.6    6e-05   Sesamum indicum [beniseed]
ref|XP_009804868.1|  PREDICTED: probable E3 ubiquitin-protein lig...  50.8    1e-04   Nicotiana sylvestris
emb|CDP05892.1|  unnamed protein product                              50.4    2e-04   Coffea canephora [robusta coffee]
ref|XP_011082653.1|  PREDICTED: ultraviolet-B receptor UVR8 isofo...  48.1    0.001   Sesamum indicum [beniseed]



>ref|XP_006348235.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Solanum 
tuberosum]
Length=533

 Score = 68.2 bits (165),  Expect = 3e-10, Method: Composition-based stats.
 Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 18/81 (22%)
 Frame = +2

Query  248  NFVKSDVFFINCLNCLRFRLKI**LsyfwdfffsfsxsgfYILGMKMGDKLRSASMDDLP  427
            NF+ SD+F I C++C  FR+K                   +  G KMGD+LRS SM+DLP
Sbjct  24   NFLTSDIFLIKCVDCFHFRIK-----------------DCFCEG-KMGDRLRSTSMEDLP  65

Query  428  GHLVLEILTSGXXSXVDLXSL  490
             HL+LEIL SG  + +DL SL
Sbjct  66   VHLILEILLSGRLAVIDLISL  86



>ref|XP_004244215.1| PREDICTED: ultraviolet-B receptor UVR8 [Solanum lycopersicum]
Length=537

 Score = 65.9 bits (159),  Expect = 2e-09, Method: Composition-based stats.
 Identities = 35/81 (43%), Positives = 45/81 (56%), Gaps = 18/81 (22%)
 Frame = +2

Query  248  NFVKSDVFFINCLNCLRFRLKI**LsyfwdfffsfsxsgfYILGMKMGDKLRSASMDDLP  427
            NF+ SD+F I C+NC  FR+K                   +  G KMGD+LRS  M+DLP
Sbjct  24   NFLTSDIFLIKCVNCFHFRIK-----------------DCFCEG-KMGDRLRSTLMEDLP  65

Query  428  GHLVLEILTSGXXSXVDLXSL  490
             HL+LEIL  G  + +DL SL
Sbjct  66   VHLILEILMCGRLAVIDLISL  86



>ref|XP_011082651.1| PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Sesamum indicum]
Length=491

 Score = 52.0 bits (123),  Expect = 6e-05, Method: Composition-based stats.
 Identities = 23/35 (66%), Positives = 28/35 (80%), Gaps = 0/35 (0%)
 Frame = +2

Query  386  MGDKLRSASMDDLPGHLVLEILTSGXXSXVDLXSL  490
            MGD+L+S++MDDLP HL+LEILTSG  S  DL  L
Sbjct  1    MGDRLKSSTMDDLPLHLILEILTSGRLSAADLVCL  35



>ref|XP_011082652.1| PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Sesamum indicum]
Length=490

 Score = 51.6 bits (122),  Expect = 6e-05, Method: Composition-based stats.
 Identities = 23/35 (66%), Positives = 28/35 (80%), Gaps = 0/35 (0%)
 Frame = +2

Query  386  MGDKLRSASMDDLPGHLVLEILTSGXXSXVDLXSL  490
            MGD+L+S++MDDLP HL+LEILTSG  S  DL  L
Sbjct  1    MGDRLKSSTMDDLPLHLILEILTSGRLSAADLVCL  35



>ref|XP_009804868.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 
X1 [Nicotiana sylvestris]
Length=481

 Score = 50.8 bits (120),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 24/35 (69%), Positives = 28/35 (80%), Gaps = 0/35 (0%)
 Frame = +2

Query  386  MGDKLRSASMDDLPGHLVLEILTSGXXSXVDLXSL  490
            MGD+LRSASM+DLP HL+LEILTSG    +DL  L
Sbjct  1    MGDRLRSASMEDLPVHLILEILTSGRLGAIDLICL  35



>emb|CDP05892.1| unnamed protein product [Coffea canephora]
Length=492

 Score = 50.4 bits (119),  Expect = 2e-04, Method: Composition-based stats.
 Identities = 23/35 (66%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
 Frame = +2

Query  386  MGDKLRSASMDDLPGHLVLEILTSGXXSXVDLXSL  490
            MGD+LR+ SM+DLP HLVL+IL SG  S VDL  L
Sbjct  1    MGDRLRAPSMEDLPSHLVLDILISGRLSAVDLACL  35



>ref|XP_011082653.1| PREDICTED: ultraviolet-B receptor UVR8 isoform X3 [Sesamum indicum]
Length=488

 Score = 48.1 bits (113),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 23/35 (66%), Positives = 28/35 (80%), Gaps = 0/35 (0%)
 Frame = +2

Query  386  MGDKLRSASMDDLPGHLVLEILTSGXXSXVDLXSL  490
            MGD+L+S++MDDLP HL+LEILTSG  S  DL  L
Sbjct  1    MGDRLKSSTMDDLPLHLILEILTSGRLSAADLVCL  35



Lambda      K        H        a         alpha
   0.318    0.134    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 578871182308